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1NMB
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THE STRUCTURE OF A COMPLEX BETWEEN THE NC10 ANTIBODY AND INFLUENZA VIRUS NEURAMINIDASE AND COMPARISON WITH THE OVERLAPPING BINDING SITE OF THE NC41 ANTIBODY
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FAB NC10, ...
Authors:Malby, R.L, Tulip, W.R, Colman, P.M.
Deposit date:1995-01-17
Release date:1995-09-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of a complex between the NC10 antibody and influenza virus neuraminidase and comparison with the overlapping binding site of the NC41 antibody
Structure, 2, 1994
7RI6
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Structure of BAM in MSP1E3D1 nanodiscs prepared from E. coli outer membranes
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Wu, R.R, Noinaj, N.
Deposit date:2021-07-19
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM.
Nat Commun, 12, 2021
1O7Q
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BU of 1o7q by Molmil
Roles of Individual Residues of Alpha-1,3 Galactosyltransferases in Substrate Binding and Catalysis
Descriptor: GLYCEROL, MANGANESE (II) ION, N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE, ...
Authors:Zhang, Y, Swaminathan, G.J, Deshpande, A, Natesh, R, Xie, Z, Acharya, K.R, Brew, K.
Deposit date:2002-11-12
Release date:2003-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Roles of Individual Enzyme-Substrate Interactions by Alpha-1,3-Galactosyltransferase in Catalysis and Specificity.
Biochemistry, 42, 2003
7RI4
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BU of 7ri4 by Molmil
Structure of a BAM/EspP(beta9-12) hybrid-barrel intermediate
Descriptor: EspPbeta9-12, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Wu, R.R, Noinaj, N.
Deposit date:2021-07-19
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM.
Nat Commun, 12, 2021
7RI7
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BU of 7ri7 by Molmil
The structure of BAM in MSP1D1 nanodiscs
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Wu, R.R, Noinaj, N.
Deposit date:2021-07-19
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM.
Nat Commun, 12, 2021
7RI9
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The structure of BAM in MSP1E3D1 at 6.9 Angstrom resolution
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Wu, R.R, Noinaj, N.
Deposit date:2021-07-19
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM.
Nat Commun, 12, 2021
7RI8
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The structure of BAM in MSP2N2 nanodiscs
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Wu, R.R, Noinaj, N.
Deposit date:2021-07-19
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM.
Nat Commun, 12, 2021
1NMA
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BU of 1nma by Molmil
N9 NEURAMINIDASE COMPLEXES WITH ANTIBODIES NC41 AND NC10: EMPIRICAL FREE-ENERGY CALCULATIONS CAPTURE SPECIFICITY TRENDS OBSERVED WITH MUTANT BINDING DATA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FAB NC10, N9 NEURAMINIDASE, ...
Authors:Tulip, W.R, Varghese, J.N, Colman, P.M.
Deposit date:1994-05-06
Release date:1995-09-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:N9 neuraminidase complexes with antibodies NC41 and NC10: empirical free energy calculations capture specificity trends observed with mutant binding data.
Biochemistry, 33, 1994
1W4X
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Phenylacetone Monooxygenase, a Baeyer-Villiger Monooxygenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHENYLACETONE MONOOXYGENASE, SULFATE ION
Authors:Malito, E, Alfieri, A, Mattevi, A.
Deposit date:2004-08-03
Release date:2004-09-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Baeyer-Villiger Monooxygenase
Proc.Natl.Acad.Sci.USA, 101, 2004
7RCV
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BU of 7rcv by Molmil
High-resolution structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp. PCC 6803
Descriptor: (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Gisriel, C.J, Brudvig, G.W.
Deposit date:2021-07-08
Release date:2021-12-29
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (2.01 Å)
Cite:High-resolution cryo-electron microscopy structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp. PCC 6803.
Proc.Natl.Acad.Sci.USA, 119, 2022
1W0N
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BU of 1w0n by Molmil
Structure of uncomplexed Carbohydrate Binding Domain CBM36
Descriptor: CALCIUM ION, ENDO-1,4-BETA-XYLANASE D, MAGNESIUM ION, ...
Authors:Jamal, S, Boraston, A.B, Davies, G.J.
Deposit date:2004-06-09
Release date:2004-10-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Ab Initio Structure Determination and Functional Characterization of Cbm36: A New Family of Calcium-Dependent Carbohydrate Binding Modules
Structure, 12, 2004
1NRK
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BU of 1nrk by Molmil
YGFZ PROTEIN
Descriptor: SULFATE ION, YGFZ Protein
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L, Structure 2 Function Project (S2F)
Deposit date:2003-01-24
Release date:2004-03-09
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the YgfZ protein from Escherichia coli suggests a folate-dependent regulatory role in one-carbon metabolism.
J.Bacteriol., 186, 2004
7T0Z
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Complex of GABA-A synaptic receptor with autoimmune antibody Fab175
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab175 IgG1 heavy chain, ...
Authors:Noviello, C.M, Hibbs, R.E, Kreye, J, Teng, J, Pruss, H.
Deposit date:2021-11-30
Release date:2022-07-13
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural mechanisms of GABA A receptor autoimmune encephalitis.
Cell, 185, 2022
7SMP
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BU of 7smp by Molmil
CryoEM structure of NKCC1 Bu-I
Descriptor: 3-(butylamino)-4-phenoxy-5-sulfamoylbenzoic acid, POTASSIUM ION, Solute carrier family 12 member 2
Authors:Moseng, M.A.
Deposit date:2021-10-26
Release date:2022-09-28
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling.
Sci Adv, 8, 2022
1W4K
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Peripheral-subunit binding domains from mesophilic, thermophilic, and hyperthermophilic bacteria fold by ultrafast, apparently two-state transitions
Descriptor: PYRUVATE DEHYDROGENASE E2
Authors:Ferguson, N, Sharpe, T.D, Schartau, P.J, Allen, M.D, Johnson, C.M, Sato, S, Fersht, A.R.
Deposit date:2004-07-23
Release date:2005-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ultra-Fast Barrier-Limited Folding in the Peripheral Subunit-Binding Domain Family.
J.Mol.Biol., 353, 2005
1NUL
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BU of 1nul by Molmil
XPRTASE FROM E. COLI
Descriptor: MAGNESIUM ION, SULFATE ION, XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
Authors:Vos, S, De Jersey, J, Martin, J.L.
Deposit date:1996-10-15
Release date:1997-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Escherichia coli xanthine phosphoribosyltransferase.
Biochemistry, 36, 1997
1VVE
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BU of 1vve by Molmil
C-TERMINAL HALF OF VACCINIA VIRUS COMPLEMENT CONTROL PROTEIN, NMR, 21 STRUCTURES
Descriptor: VACCINIA VIRUS COMPLEMENT CONTROL PROTEIN
Authors:Wiles, A, Campbell, I.D, Barlow, P.N.
Deposit date:1997-06-25
Release date:1997-12-03
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:NMR studies of a viral protein that mimics the regulators of complement activation.
J.Mol.Biol., 272, 1997
1VWK
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BU of 1vwk by Molmil
STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2
Descriptor: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1VWH
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STREPTAVIDIN COMPLEXED WITH THE HEAD-TO-TAIL DISULFIDE-BONDED PEPTIDE DIMER OF CYCLO-AC-[CHPQGPPC]-NH2, PH 3.5
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1VWF
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BU of 1vwf by Molmil
STREPTAVIDIN COMPLEXED WITH CYCLO-AC-[CHPQGPPC]-NH2 MONOMER, PH 3.67
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1VWR
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BU of 1vwr by Molmil
STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 3.5, I4122 COMPLEX
Descriptor: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
7SQ0
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Get3 bound to ADP and the transmembrane domain of the tail-anchored protein Bos1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase ASNA1 homolog, MAGNESIUM ION, ...
Authors:Fry, M.Y, Maggiolo, A.O, Clemons Jr, W.M.
Deposit date:2021-11-04
Release date:2022-07-20
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structurally derived universal mechanism for the catalytic cycle of the tail-anchored targeting factor Get3.
Nat.Struct.Mol.Biol., 29, 2022
1VWI
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STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 1.5, I222 COMPLEX
Descriptor: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
7T64
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Rabbit RyR1 disease mutant Y523S in complex with FKBP12.6 embedded in lipidic nanodisc in the closed state
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ZINC ION
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2021-12-13
Release date:2022-07-20
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Molecular mechanism of the severe MH/CCD mutation Y522S in skeletal ryanodine receptor (RyR1) by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
1VWP
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STREPTAVIDIN COMPLEXED WITH CYCLO-AC-[CHPQGPPC]-NH2 MONOMER, PH 2.5
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997

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