PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

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4NLX	Poliovirus Polymerase - G289A/C290V Loop Mutant Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ... Authors: Sholders, A.J, Peersen, O.B. Deposit date: 2013-11-14 Release date: 2014-01-22 Last modified: 2014-03-26 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Distinct conformations of a putative translocation element in poliovirus polymerase. J.Mol.Biol., 426, 2014
6IPJ	Binary Complex of Human DNA Polymerase Mu with MndTTP Descriptor: DNA-directed DNA/RNA polymerase mu,DNA-directed DNA/RNA polymerase mu, MANGANESE (II) ION, SULFATE ION, ... Authors: Chang, Y.K, Wu, W.J, Tsai, M.D. Deposit date: 2018-11-03 Release date: 2019-05-29 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.98 Å) Cite: Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
3K7U	Structure of essential protein from Trypanosoma brucei Descriptor: Antibody, MP18 RNA editing complex protein Authors: Wu, M. Deposit date: 2009-10-13 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structures of a key interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies. J.Struct.Biol., 174, 2011
1D9A	SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN (RBD2) OF HU ANTIGEN C (HUC) Descriptor: HU ANTIGEN C Authors: Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 1999-10-26 Release date: 2000-04-07 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C. Nucleic Acids Res., 28, 2000
3K80	Structure of essential protein from Trypanosoma brucei Descriptor: Antibody, MP18 RNA editing complex protein Authors: Wu, M. Deposit date: 2009-10-13 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structures of a key interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies. J.Struct.Biol., 174, 2011
1Y0Q	Crystal structure of an active group I ribozyme-product complex Descriptor: 5'-R(*GP*CP*UP*U)-3', Group I ribozyme, MAGNESIUM ION, ... Authors: Golden, B.L, Kim, H, Chase, E. Deposit date: 2004-11-16 Release date: 2004-12-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Crystal structure of a phage Twort group I ribozyme-product complex Nat.Struct.Mol.Biol., 12, 2005
1LLN	1.6A CRYSTAL STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN-III (PAP-III) WITH METHYLATED LYSINES Descriptor: Antiviral Protein 3 Authors: Kurinov, I.V, Uckun, F.M. Deposit date: 2002-04-29 Release date: 2003-06-17 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: High resolution X-ray structure of potent anti-HIV pokeweed antiviral protein-III Biochem.Pharm., 65, 2003
1D8Z	SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN (RBD1) OF HU ANTIGEN C (HUC) Descriptor: HU ANTIGEN C Authors: Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 1999-10-26 Release date: 2000-04-07 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C. Nucleic Acids Res., 28, 2000
2P7S	Enzymatic and Structural Characterisation of Amphinase, a Novel Cytotoxic Ribonuclease from Rana pipiens Oocytes Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Amphinase-2, ... Authors: Singh, U.P. Deposit date: 2007-03-20 Release date: 2007-05-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Enzymatic and Structural Characterisation of Amphinase, a Novel Cytotoxic Ribonuclease from Rana pipiens Oocytes. J.Mol.Biol., 371, 2007
2NA2	DROSHA QUAD MUTANT DOUBLE-STRANDED RNA BINDING COMPETENT Descriptor: Ribonuclease 3 Authors: Showalter, S.A, Sahu, D, Kranick, J.C. Deposit date: 2015-12-17 Release date: 2016-12-21 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Towards understanding Drosha dsRBDs role in Microprocessing To be Published
7ELR	Crystal structure of xanthine riboswitch with xanthine Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NMT1 (46-MER), ... Authors: Xu, X.C, Ren, A.M. Deposit date: 2021-04-12 Release date: 2021-06-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.66 Å) Cite: Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition. Nucleic Acids Res., 49, 2021
2D55	Structural, physical and biological characteristics of RNA.DNA binding agent N8-actinomycin D Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') Authors: Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F. Deposit date: 1995-05-01 Release date: 1995-10-15 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal Structure of the 2:1 Complex between D(Gaagcttc) and the Anticancer Drug Actinomycin D. J.Mol.Biol., 225, 1992
7ELS	Crystal structure of xanthine riboswitch with 8-azaxanthine Descriptor: 8-AZAXANTHINE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Xu, X.C, Ren, A.M. Deposit date: 2021-04-12 Release date: 2021-06-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3 Å) Cite: Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition. Nucleic Acids Res., 49, 2021
7ELP	Crystal structure of xanthine riboswitch with xanthine, iridium hexammine soak Descriptor: GUANOSINE-5'-TRIPHOSPHATE, IRIDIUM ION, MAGNESIUM ION, ... Authors: Xu, X.C, Ren, A.M. Deposit date: 2021-04-12 Release date: 2021-06-30 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.79 Å) Cite: Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition. Nucleic Acids Res., 49, 2021
6RSA	NUCLEAR MAGNETIC RESONANCE AND NEUTRON DIFFRACTION STUDIES OF THE COMPLEX OF RIBONUCLEASE*A WITH URIDINE VANADATE, A TRANSITION-STATE ANALOGUE Descriptor: RIBONUCLEASE A, URIDINE-2',3'-VANADATE Authors: Wlodawer, A. Deposit date: 1986-02-25 Release date: 1986-05-07 Last modified: 2024-06-05 Method: NEUTRON DIFFRACTION (2 Å), SOLUTION NMR Cite: Nuclear magnetic resonance and neutron diffraction studies of the complex of ribonuclease A with uridine vanadate, a transition-state analogue. Biochemistry, 24, 1985
6P1T	Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and bound CMPCPP Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, ... Authors: Kaminski, A.M, Pedersen, L.C, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A. Deposit date: 2019-05-20 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine. Nucleic Acids Res., 47, 2019
6P1W	Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing undamaged template dG and bound incoming CMPCPP Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, ... Authors: Kaminski, A.M, Pedersen, L.C, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A. Deposit date: 2019-05-20 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.751 Å) Cite: Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine. Nucleic Acids Res., 47, 2019
3A5E	Crystal structure of 5K RNase Sa Descriptor: Guanyl-specific ribonuclease Sa Authors: Takano, K. Deposit date: 2009-08-06 Release date: 2010-08-04 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Urea denatured state ensembles contain extensive secondary structure that is increased in hydrophobic proteins Protein Sci., 19, 2010
6P1N	Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and bound incoming dAMPNPP Descriptor: 1,2-ETHANEDIOL, 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... Authors: Kaminski, A.M, Pedersen, L.C, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A. Deposit date: 2019-05-20 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine. Nucleic Acids Res., 47, 2019
6P1P	Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and bound incoming dCMPNPP Descriptor: 1,2-ETHANEDIOL, 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... Authors: Kaminski, A.M, Pedersen, L.C, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A. Deposit date: 2019-05-20 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine. Nucleic Acids Res., 47, 2019
6P1V	Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing undamaged template dG and bound incoming dCMPNPP Descriptor: 1,2-ETHANEDIOL, 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... Authors: Kaminski, A.M, Pedersen, L.C, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A. Deposit date: 2019-05-20 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine. Nucleic Acids Res., 47, 2019
2BHG	3C protease from type A10(61) foot-and-mouth disease virus Descriptor: FOOT-AND-MOUTH DISEASE VIRUS 3C PROTEASE Authors: Birtley, J.R, Brick, P, Curry, S. Deposit date: 2005-01-10 Release date: 2005-02-04 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structure of Foot-and-Mouth Disease Virus 3C Protease: New Insights Into Catalytic Mechanism and Cleavage Specificity J.Biol.Chem., 280, 2005
4NLS	Poliovirus Polymerase - S288A Loop Mutant Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ... Authors: Sholders, A.J, Peersen, O.B. Deposit date: 2013-11-14 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Distinct conformations of a putative translocation element in poliovirus polymerase. J.Mol.Biol., 426, 2014
6P1R	Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and bound incoming AMPNPP Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CHLORIDE ION, ... Authors: Kaminski, A.M, Pedersen, L.C, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A. Deposit date: 2019-05-20 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.701 Å) Cite: Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine. Nucleic Acids Res., 47, 2019
4NLQ	Poliovirus Polymerase - C290F Loop Mutant Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ... Authors: Sholders, A.J, Peersen, O.B. Deposit date: 2013-11-14 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Distinct conformations of a putative translocation element in poliovirus polymerase. J.Mol.Biol., 426, 2014

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