Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8SSD
DownloadVisualize
BU of 8ssd by Molmil
Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8
Descriptor: Methionine synthase
Authors:Yamada, K, Mendoza, J, Koutmos, M.
Deposit date:2023-05-08
Release date:2023-10-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo.
Nat Commun, 14, 2023
6D2Z
DownloadVisualize
BU of 6d2z by Molmil
Structure of human Usb1 with uridine-adenosine, inactive H208Q mutant
Descriptor: 5'-R(UP*A)-3'), CHLORIDE ION, U6 snRNA phosphodiesterase
Authors:Nomura, Y, Montemayor, E.J, Butcher, S.E.
Deposit date:2018-04-14
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structural and mechanistic basis for preferential deadenylation of U6 snRNA by Usb1.
Nucleic Acids Res., 46, 2018
6YJN
DownloadVisualize
BU of 6yjn by Molmil
Crystal structure of beta carbonic anhydrase from the pathogenic bacterium Burkholderia pseudomallei.
Descriptor: Beta carbonic anhydrase, ZINC ION
Authors:Angeli, A, Ferraroni, M.
Deposit date:2020-04-03
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Tetrameric Type II beta-Carbonic Anhydrase from the Pathogenic BacteriumBurkholderia pseudomallei.
Molecules, 25, 2020
5TTW
DownloadVisualize
BU of 5ttw by Molmil
Crystal Structure of EED in Complex with UNC4859
Descriptor: Polycomb protein EED, SULFATE ION, UNC4859, ...
Authors:The, J, Barnash, K.D, Brown, P.J, Edwards, A.M, Bountra, C, Frye, S.V, James, L.I, Arrowsmith, C.H.
Deposit date:2016-11-04
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Discovery of Peptidomimetic Ligands of EED as Allosteric Inhibitors of PRC2.
ACS Comb Sci, 19, 2017
6PTY
DownloadVisualize
BU of 6pty by Molmil
Soluble model of human CuA (Tt3Lh)
Descriptor: Cytochrome c oxidase subunit 2, DINUCLEAR COPPER ION, GLYCEROL, ...
Authors:Giannini, E, Lisa, M.N, Morgada, M.N, Alzari, P.M, Vila, A.J.
Deposit date:2019-07-16
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Unexpected electron spin density on the axial methionine ligand in CuAsuggests its involvement in electron pathways.
Chem.Commun.(Camb.), 56, 2020
6HXI
DownloadVisualize
BU of 6hxi by Molmil
Structure of ATP citrate lyase from Methanothrix soehngenii in complex with citrate and coenzyme A
Descriptor: ACETATE ION, CITRATE ANION, COENZYME A, ...
Authors:Verstraete, K, Verschueren, K.
Deposit date:2018-10-17
Release date:2019-04-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle.
Nature, 568, 2019
8SSE
DownloadVisualize
BU of 8sse by Molmil
Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8
Descriptor: COBALAMIN, Methionine synthase
Authors:Yamada, K, Mendoza, J, Koutmos, M.
Deposit date:2023-05-08
Release date:2023-10-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo.
Nat Commun, 14, 2023
6FH8
DownloadVisualize
BU of 6fh8 by Molmil
E. coli surface display of streptavidin for directed evolution of an allylic deallocase
Descriptor: Streptavidin, biotinylated ruthenium cyclopentadienide
Authors:Heinisch, T, Schwizer, F, Garabedian, B, Csibra, E, Jeschek, M, Pinheiro Bernhardes, V, Marliere, P, Panke, S, Ward, T.R.
Deposit date:2018-01-12
Release date:2018-08-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:E. colisurface display of streptavidin for directed evolution of an allylic deallylase.
Chem Sci, 9, 2018
7KIG
DownloadVisualize
BU of 7kig by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Indole-3-butyric acid
Descriptor: 3-INDOLEBUTYRIC ACID, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-23
Release date:2021-12-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
6YKL
DownloadVisualize
BU of 6ykl by Molmil
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11k
Descriptor: 1,2-ETHANEDIOL, Leucine--tRNA ligase, MAGNESIUM ION, ...
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2020-04-06
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Synthesis and structure-activity studies of novel anhydrohexitol-based Leucyl-tRNA synthetase inhibitors.
Eur.J.Med.Chem., 211, 2021
6PWZ
DownloadVisualize
BU of 6pwz by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidocytidine
Descriptor: 2'-azidocytidine, GLYCEROL, PHOSPHATE ION, ...
Authors:Cuthbert, B.J, Goulding, C.W.
Deposit date:2019-07-24
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Incorporation of novel azido-nucleotides into RNA
To Be Published
6HBS
DownloadVisualize
BU of 6hbs by Molmil
Structure of PLP internal aldimine form of Sphingopyxis sp. MTA144 FumI protein
Descriptor: Aminopentol aminotransferase, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Campopiano, D.J, Serpico, A, Marles-Wright, J.
Deposit date:2018-08-13
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of PLP internal aldimine form of Sphingopyxis sp. MTA144 FumI protein
To Be Published
6FDK
DownloadVisualize
BU of 6fdk by Molmil
Structure of Chlamydia trachomatis effector protein Cdu1 bound to ubiquitin
Descriptor: CHLORIDE ION, Deubiquitinase and deneddylase Dub1, Polyubiquitin-B, ...
Authors:Ramirez, Y, Kisker, C.
Deposit date:2017-12-25
Release date:2018-08-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of Substrate Recognition and Covalent Inhibition of Cdu1 from Chlamydia trachomatis.
ChemMedChem, 13, 2018
6YKT
DownloadVisualize
BU of 6ykt by Molmil
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11e
Descriptor: 1,2-ETHANEDIOL, Leucine--tRNA ligase, MAGNESIUM ION, ...
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2020-04-06
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Synthesis and structure-activity studies of novel anhydrohexitol-based Leucyl-tRNA synthetase inhibitors.
Eur.J.Med.Chem., 211, 2021
6HC6
DownloadVisualize
BU of 6hc6 by Molmil
The structure of BSAP, a zinc aminopeptidase from Bacillus subtilis
Descriptor: ACETATE ION, Aminopeptidase YwaD, GLYCEROL, ...
Authors:Rogoulenko, E, Lansky, S, Faygenboim, R, Cohen, T, Alhadeff, R, Shoham, Y, Shoham, G.
Deposit date:2018-08-14
Release date:2019-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:To be published
To Be Published
6CIC
DownloadVisualize
BU of 6cic by Molmil
Structure of the human nitric oxide synthase R354A/G357D mutant heme domain in complex with N-(1-(2-(Ethyl(methyl)amino)ethyl)-1,2,3,4-tetrahydroquino-lin-6-yl)thiophene-2-carboximidamide
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, GLYCEROL, N-(1-{2-[ethyl(methyl)amino]ethyl}-1,2,3,4-tetrahydroquinolin-6-yl)thiophene-2-carboximidamide, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2018-02-23
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structural Basis for Isoform Selective Nitric Oxide Synthase Inhibition by Thiophene-2-carboximidamides.
Biochemistry, 57, 2018
5TUQ
DownloadVisualize
BU of 5tuq by Molmil
Crystal Structure of a 6-Cyclohexylmethyl-3-hydroxypyrimidine-2,4-dione Inhibitor in Complex with HIV Reverse Transcriptase
Descriptor: 1-[(benzyloxy)methyl]-6-(cyclohexylmethyl)-3-hydroxy-5-(propan-2-yl)pyrimidine-2,4(1H,3H)-dione, HIV-1 REVERSE TRANSCRIPTASE, MAGNESIUM ION
Authors:Kirby, K.A, Sarafianos, S.G.
Deposit date:2016-11-07
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:6-Cyclohexylmethyl-3-hydroxypyrimidine-2,4-dione as an inhibitor scaffold of HIV reverase transcriptase: Impacts of the 3-OH on inhibiting RNase H and polymerase.
Eur J Med Chem, 128, 2017
6YKU
DownloadVisualize
BU of 6yku by Molmil
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11f
Descriptor: 1,2-ETHANEDIOL, Leucine--tRNA ligase, MAGNESIUM ION, ...
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2020-04-06
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Synthesis and structure-activity studies of novel anhydrohexitol-based Leucyl-tRNA synthetase inhibitors.
Eur.J.Med.Chem., 211, 2021
5TVD
DownloadVisualize
BU of 5tvd by Molmil
Crystal structure of Tm16
Descriptor: Tm16
Authors:Asojo, O.A.
Deposit date:2016-11-08
Release date:2017-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.734 Å)
Cite:Identification, Characterization, and Structure of Tm16 from Trichuris muris.
J Parasitol Res, 2017, 2017
5FIW
DownloadVisualize
BU of 5fiw by Molmil
CRYSTAL STRUCTURE OF HUMAN MYELOPEROXIDASE AT 1.7 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Bonnefond, L, Cavarelli, J.
Deposit date:2015-10-02
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Human Myeloperoxidase at 1.7 Angstroms Resolution
To be Published
6PUC
DownloadVisualize
BU of 6puc by Molmil
Structure of human MAIT A-F7 TCR in complex with human MR1-5-OP-RU
Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Awad, W, Rossjohn, J.
Deposit date:2019-07-18
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The molecular basis underpinning the potency and specificity of MAIT cell antigens.
Nat.Immunol., 21, 2020
6FI0
DownloadVisualize
BU of 6fi0 by Molmil
Crystal structure of BAZ2A PHD zinc finger in complex with Fr 19
Descriptor: 2-azanyl-1-(6,7-dihydro-4~{H}-thieno[3,2-c]pyridin-5-yl)ethanone, Bromodomain adjacent to zinc finger domain protein 2A, GLYCEROL, ...
Authors:Amato, A, Lucas, X, Bortoluzzi, A, Wright, D, Ciulli, A.
Deposit date:2018-01-16
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Targeting Ligandable Pockets on Plant Homeodomain (PHD) Zinc Finger Domains by a Fragment-Based Approach.
ACS Chem. Biol., 13, 2018
7QK8
DownloadVisualize
BU of 7qk8 by Molmil
Crystal structure of the ALDH1A3-NAD+ complex
Descriptor: Aldehyde dehydrogenase family 1 member A3, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Castellvi, A, Farres, J.
Deposit date:2021-12-17
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.893 Å)
Cite:Structural and biochemical evidence that ATP inhibits the cancer biomarker human aldehyde dehydrogenase 1A3.
Commun Biol, 5, 2022
6PY5
DownloadVisualize
BU of 6py5 by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA in complex with L-serine
Descriptor: Putative methyl-accepting chemotaxis protein, SERINE
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-07-29
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
7QXY
DownloadVisualize
BU of 7qxy by Molmil
X-ray structure of furin in complex with the dichlorophenylpyridine-based inhibitor 3
Descriptor: 3-[4-[5-[4-[[4-(acetamidomethyl)piperidin-1-ium-1-yl]methyl]-6-[3,5-bis(chloranyl)phenyl]pyridin-2-yl]oxypyrimidin-2-yl]piperazin-1-ium-1-yl]propanoate, CALCIUM ION, CHLORIDE ION, ...
Authors:Dahms, S.O, Brandstetter, H, Pautsch, A.
Deposit date:2022-01-27
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.478 Å)
Cite:Dichlorophenylpyridine-Based Molecules Inhibit Furin through an Induced-Fit Mechanism.
Acs Chem.Biol., 17, 2022

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon