PDB: 45953 resultsInfo pagesStatus searchChemie searchBIRD

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5MF0	Crystal structure of Smad4-MH1 bound to the GGCCG site. Descriptor: CHLORIDE ION, DNA (5'-D(P*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*GP*CP*CP*CP*GP*T)-3'), MH1 domain of human Smad4, ... Authors: Kaczmarska, Z, Freier, R, Marquez, J.A, Macias, M.J. Deposit date: 2016-11-16 Release date: 2017-11-15 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (3.03 Å) Cite: Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun, 8, 2017
5OAY	M. tuberculosis [4Fe-4S] protein WhiB1 is a four-helix bundle that forms a NO-sensitive complex with sigmaA and regulates the major virulence factor ESX-1 Descriptor: IRON/SULFUR CLUSTER, Transcriptional regulator WhiB1 Authors: Williamson, M.P, Green, J, Hounslow, A.M. Deposit date: 2017-06-25 Release date: 2018-01-03 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure of a Wbl protein and implications for NO sensing by M. tuberculosis. Nat Commun, 8, 2017
5OKC	Crystal structure of the Ctf18-1-8 module from Ctf18-RFC Descriptor: 1,2-ETHANEDIOL, Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, ... Authors: Grabarczyk, D.B, Kisker, C. Deposit date: 2017-07-25 Release date: 2017-12-20 Last modified: 2018-01-10 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural Basis for the Recruitment of Ctf18-RFC to the Replisome. Structure, 26, 2018
5MEZ	Crystal structure of Smad4-MH1 bound to the GGCT site. Descriptor: CHLORIDE ION, DNA (5'-D(P*GP*CP*AP*GP*GP*CP*TP*AP*GP*CP*CP*TP*GP*CP*A)-3'), MH1 domain of human Smad4, ... Authors: Kaczmarska, Z, Freier, R, Marquez, J.A, Macias, M.J. Deposit date: 2016-11-16 Release date: 2017-11-15 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.98 Å) Cite: Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun, 8, 2017
5SY5	Crystal Structure of the Heterodimeric NPAS1-ARNT Complex Descriptor: Aryl hydrocarbon receptor nuclear translocator, Neuronal PAS domain-containing protein 1 Authors: Wu, D, Su, X, Potluri, N, Kim, Y, Rastinejad, F. Deposit date: 2016-08-10 Release date: 2016-11-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.201 Å) Cite: NPAS1-ARNT and NPAS3-ARNT crystal structures implicate the bHLH-PAS family as multi-ligand binding transcription factors. Elife, 5, 2016
7P6F	1.93 A resolution X-ray crystal structure of the transcriptional regulator SrnR from Streptomyces griseus Descriptor: ACETATE ION, SODIUM ION, Transcriptional regulator SrnR Authors: Mazzei, L, Ciurli, S. Deposit date: 2021-07-16 Release date: 2022-05-25 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Structure, dynamics, and function of SrnR, a transcription factor for nickel-dependent gene expression. Metallomics, 13, 2021
5FV7	Human Fen1 in complex with an N-hydroxyurea compound Descriptor: 1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione, FLAP ENDONUCLEASE 1, MAGNESIUM ION Authors: Exell, J.C, Thompson, M.J, Finger, L.D, Shaw, S.K, Abbott, W.M, McWhirter, C, Debreczeni, J.E, Jones, C.D, Nissink, J.W.M, Ward, T.A, Sioberg, C.W.L, Molina, D.M, Durant, S.T, Grasby, J.A. Deposit date: 2016-02-03 Release date: 2016-08-17 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.84 Å) Cite: Cellular Active N-Hydroxyurea Fen1 Inhibitors Block Substrate Entry to the Active Site Nat.Chem.Biol., 12, 2016
6QKQ	NMR solution structure of LSR2-T112D binding domain. Descriptor: Nucleoid-associated protein Lsr2 Authors: Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V. Deposit date: 2019-01-30 Release date: 2019-07-17 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112. Mol.Microbiol., 112, 2019
6QKP	NMR solution structure of LSR2 binding domain. Descriptor: Nucleoid-associated protein Lsr2 Authors: Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V. Deposit date: 2019-01-30 Release date: 2019-07-17 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112. Mol.Microbiol., 112, 2019
6SRN	Structural basis for control of antibiotic production by bacterial hormones Descriptor: 4-(Hydroxymethyl)-2-propylfuran-3-carboxylic acid, GLYCEROL, TetR family transcriptional regulator Authors: Fulop, V. Deposit date: 2019-09-05 Release date: 2020-09-30 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Molecular basis for control of antibiotic production by a bacterial hormone. Nature, 590, 2021
8IQG	Cryo-EM structure of the monomeric human CAF1-H3-H4 complex Descriptor: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ... Authors: Liu, C.P, Yu, Z.Y, Xu, R.M. Deposit date: 2023-03-16 Release date: 2023-08-16 Last modified: 2023-09-06 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1. Science, 381, 2023
8IQF	Cryo-EM structure of the dimeric human CAF1-H3-H4 complex Descriptor: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ... Authors: Liu, C.P, Yu, Z.Y, Xu, R.M. Deposit date: 2023-03-16 Release date: 2023-08-16 Last modified: 2023-09-06 Method: ELECTRON MICROSCOPY (4.6 Å) Cite: Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1. Science, 381, 2023
6K15	RSC substrate-recruitment module Descriptor: Chromatin structure-remodeling complex protein RSC3, Chromatin structure-remodeling complex protein RSC30, Chromatin structure-remodeling complex protein RSC58, ... Authors: Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C. Deposit date: 2019-05-09 Release date: 2019-11-13 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structure of the RSC complex bound to the nucleosome. Science, 366, 2019
5X80	CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN RV2887 COMPLEX WITH SALICYLIC ACID Descriptor: 2-HYDROXYBENZOIC ACID, SULFATE ION, Uncharacterized HTH-type transcriptional regulator Rv2887 Authors: Gao, Y.R, Li, D.F, Wang, D.C, Bi, L.J. Deposit date: 2017-02-28 Release date: 2017-08-09 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis Sci Rep, 7, 2017
3BPX	Crystal Structure of MarR Descriptor: 2-HYDROXYBENZOIC ACID, SODIUM ION, Transcriptional regulator Authors: Saridakis, V, Shahinas, D, Xu, X, Christendat, D. Deposit date: 2007-12-19 Release date: 2008-05-20 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural insight on the mechanism of regulation of the MarR family of proteins: high-resolution crystal structure of a transcriptional repressor from Methanobacterium thermoautotrophicum. J.Mol.Biol., 377, 2008
4NC7	N-terminal domain of delta-subunit of RNA polymerase complexed with I3C and nickel ions Descriptor: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, DNA-directed RNA polymerase subunit delta, NICKEL (II) ION Authors: Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M. Deposit date: 2013-10-24 Release date: 2014-07-02 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2 Å) Cite: X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. J.Struct.Biol., 187, 2014
3BPV	Crystal Structure of MarR Descriptor: Transcriptional regulator Authors: Saridakis, V, Shahinas, D, Xu, X, Christendat, D. Deposit date: 2007-12-19 Release date: 2008-05-20 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structural insight on the mechanism of regulation of the MarR family of proteins: high-resolution crystal structure of a transcriptional repressor from Methanobacterium thermoautotrophicum. J.Mol.Biol., 377, 2008
4ETS	Crystal structure of Campylobacter jejuni ferric uptake regulator Descriptor: CHLORIDE ION, Ferric uptake regulation protein, ZINC ION Authors: Sarvan, S, Brunzelle, J.B, Couture, J.-F. Deposit date: 2012-04-24 Release date: 2012-06-20 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and regulon of Campylobacter jejuni ferric uptake regulator Fur define apo-Fur regulation. Proc.Natl.Acad.Sci.USA, 109, 2012
6RLB	Structure of the dynein-2 complex; tail domain Descriptor: Cytoplasmic dynein 2 light intermediate chain 1, Dynein light chain 1, cytoplasmic, ... Authors: Toropova, K, Zalyte, R, Mukhopadhyay, A.G, Mladenov, M, Carter, A.P, Roberts, A.J. Deposit date: 2019-05-01 Release date: 2019-08-28 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure of the dynein-2 complex and its assembly with intraflagellar transport trains. Nat.Struct.Mol.Biol., 26, 2019
8SXU	Structure of LINE-1 ORF2p with an oligo(A) template Descriptor: LINE-1 retrotransposable element ORF2 protein, RNA (25-MER) Authors: van Eeuwen, T, Taylor, M.S, Rout, M.P. Deposit date: 2023-05-24 Release date: 2024-01-10 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (3.66 Å) Cite: Structures, functions and adaptations of the human LINE-1 ORF2 protein. Nature, 626, 2024
5M4S	Transcription factor TFIIA as a single chain protein Descriptor: Transcription initiation factor IIA subunit 2,Transcription initiation factor IIA subunit 1,Transcription initiation factor IIA subunit 1 Authors: Kandiah, E, Gupta, K. Deposit date: 2016-10-19 Release date: 2017-11-29 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID. Elife, 6, 2017
3FMS	Crystal structure of TM0439, a GntR transcriptional regulator Descriptor: ACETATE ION, NICKEL (II) ION, Transcriptional regulator, ... Authors: Zheng, M, Cooper, D.R, Yu, M, Hung, L.-W, Derewenda, U, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI) Deposit date: 2008-12-22 Release date: 2009-02-10 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure of Thermotoga maritima TM0439: implications for the mechanism of bacterial GntR transcription regulators with Zn2+-binding FCD domains. Acta Crystallogr.,Sect.D, 65, 2009
6P0F	N-terminal domain of Thermococcus Gammatolerans McrB Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, GTPase subunit of restriction endonuclease, ... Authors: Hosford, C.J, Chappie, J.S. Deposit date: 2019-05-17 Release date: 2019-12-18 Last modified: 2020-01-29 Method: X-RAY DIFFRACTION (1.683 Å) Cite: The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs. J.Biol.Chem., 295, 2020
3VOD	Crystal Structure of mutant MarR C80S from E.coli Descriptor: Multiple antibiotic resistance protein marR Authors: Lou, H, Zhu, R, Hao, Z. Deposit date: 2012-01-21 Release date: 2013-03-06 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli. Nat.Chem.Biol., 10, 2014
2J4D	Cryptochrome 3 from Arabidopsis thaliana Descriptor: 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, CRYPTOCHROME DASH, FLAVIN-ADENINE DINUCLEOTIDE Authors: Klar, T, Pokorny, R, Batschauer, A, Essen, L.-O. Deposit date: 2006-08-28 Release date: 2007-06-19 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Cryptochrome 3 from Arabidopsis Thaliana: Structural and Functional Analysis of its Complex with a Folate Light Antenna J.Mol.Biol., 366, 2007

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