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6F4Z
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BU of 6f4z by Molmil
2'F-araG modified quadruplex with flipped G-tract and central tetrad
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*(GFL)P*GP*GP*AP*CP*GP*GP*G)-3')
Authors:Dickerhoff, J, Weisz, K.
Deposit date:2017-11-30
Release date:2018-04-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Fluorine-Mediated Editing of a G-Quadruplex Folding Pathway.
Chembiochem, 19, 2018
4B35
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BU of 4b35 by Molmil
Humanised monomeric RadA in complex with 4-methylester indole
Descriptor: DNA REPAIR AND RECOMBINATION PROTEIN RADA, PHOSPHATE ION, methyl 1H-indole-4-carboxylate
Authors:Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M.
Deposit date:2012-07-20
Release date:2013-02-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Using a Fragment-Based Approach to Target Protein-Protein Interactions.
Chembiochem, 14, 2013
4B3B
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BU of 4b3b by Molmil
Humanised monomeric RadA in complex with FHTA tetrapeptide
Descriptor: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHTA TETRAPEPTIDE, PHOSPHATE ION
Authors:Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M.
Deposit date:2012-07-23
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.193 Å)
Cite:Using a Fragment-Based Approach to Target Protein-Protein Interactions.
Chembiochem, 14, 2013
8USP
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BU of 8usp by Molmil
Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway
Descriptor: DNA repair/transcription protein MET18/MMS19
Authors:Vasquez, S, Drennan, C.L.
Deposit date:2023-10-28
Release date:2023-12-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway.
Commun Biol, 6, 2023
8USQ
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BU of 8usq by Molmil
Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway
Descriptor: DNA repair/transcription protein MET18/MMS19
Authors:Vasquez, S, Drennan, C.L.
Deposit date:2023-10-29
Release date:2023-12-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (12.77 Å)
Cite:Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway.
Commun Biol, 6, 2023
4B32
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BU of 4b32 by Molmil
Humanised monomeric RadA in complex with napht-1-ol
Descriptor: DNA REPAIR AND RECOMBINATION PROTEIN RADA, PHOSPHATE ION, naphthalen-2-ol
Authors:Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M.
Deposit date:2012-07-20
Release date:2013-02-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Using a Fragment-Based Approach to Target Protein-Protein Interactions.
Chembiochem, 14, 2013
3AUZ
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BU of 3auz by Molmil
Crystal structure of Mre11 with manganese
Descriptor: DNA double-strand break repair protein mre11, GLYCEROL, MANGANESE (II) ION
Authors:Park, Y.B, Cho, Y.
Deposit date:2011-02-18
Release date:2011-05-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.206 Å)
Cite:Crystal Structure of the Mre11-Rad50-ATP S Complex: Understanding the Interplay between Mre11 and Rad50
To be Published
3BO4
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BU of 3bo4 by Molmil
A relaxed active site following exon ligation by a group I intron
Descriptor: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*A)-D(P*DG)-3'), DNA/RNA (5'-R(*CP*A)-D(P*DU)-R(P*AP*CP*GP*GP*CP*C)-3'), Group I intron P9, ...
Authors:Lipchock, S.V, Strobel, S.A.
Deposit date:2007-12-17
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:A relaxed active site after exon ligation by the group I intron
Proc.Natl.Acad.Sci.Usa, 105, 2008
7VCK
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BU of 7vck by Molmil
NMR solution structures of a hairpin formed by GGCCTG repeats
Descriptor: DNA (5'-D(*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*G)-3'), SODIUM ION
Authors:Yi, J, Wan, L, Guo, P.
Deposit date:2021-09-03
Release date:2022-02-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution structures of d(GGCCTG)n repeats associated with spinocerebellar ataxia type 36.
Int.J.Biol.Macromol., 201, 2022
8ABD
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BU of 8abd by Molmil
Solution structure of Phen-DC3 intercalating into a quadruplex-duplex hybrid
Descriptor: DNA (36-MER), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
Authors:Vianney, Y.M, Weisz, K.
Deposit date:2022-07-04
Release date:2022-11-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High-affinity binding at quadruplex-duplex junctions: rather the rule than the exception.
Nucleic Acids Res., 50, 2022
6J99
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BU of 6j99 by Molmil
Cryo-EM structure of human DOT1L in complex with an H2B-monoubiquitinated nucleosome
Descriptor: DNA (144-MER), DNA (145-MER), Histone H2A, ...
Authors:Yao, T, Huang, J.
Deposit date:2019-01-22
Release date:2019-02-27
Last modified:2019-04-10
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of the crosstalk between histone H2B monoubiquitination and H3 lysine 79 methylation on nucleosome.
Cell Res., 29, 2019
2KD1
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BU of 2kd1 by Molmil
Solution NMR structure of the integrase-like domain from Bacillus cereus ordered locus BC_1272. Northeast Structural Genomics Consortium Target BcR268F
Descriptor: DNA integration/recombination/invertion protein
Authors:Rossi, P, Lee, H, Maglaqui, M, Foote, E.L, Buchwald, W.A, Jiang, M, Swapna, G.V.T, Nair, R, Xiao, R, Acton, T.B, Rost, B, Prestegard, J.H, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-12-31
Release date:2009-01-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR Structure of the Integrase-Like Domain from Bacillus cereus Ordered Locus BC_1272. Northeast Structural Genomics Consortium Target BcR268F.
To be Published
6K3X
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BU of 6k3x by Molmil
G-quadruplex complex with linear dinucleotide d(AG)
Descriptor: DNA (5'-D(*AP*G)-3'), DNA (5'-D(*TP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Winnerdy, F.R, Heddi, B, Phan, A.T.
Deposit date:2019-05-22
Release date:2020-01-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structures of a G-Quadruplex Bound to Linear- and Cyclic-Dinucleotides.
J.Am.Chem.Soc., 141, 2019
2LSI
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BU of 2lsi by Molmil
Solution structure of polymerase-interacting domain of human Rev1 in complex with translesional synthesis polymerase kappa
Descriptor: DNA polymerase kappa, DNA repair protein REV1
Authors:Liu, D, Ryu, K, Ko, J, Choi, B.
Deposit date:2012-05-01
Release date:2013-05-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insights into the scaffold mechanism of human Rev1 in translesional synthesis revealed by the structural studies on its polymerase-interacting domain
To be Published
3TOK
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BU of 3tok by Molmil
Assaying the energies of biological halogen bonds.
Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*TP*CP*GP*G)-3'), SODIUM ION
Authors:Carter, M, Ho, P.S.
Deposit date:2011-09-05
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Assaying the Energies of Biological Halogen Bonds
CRYST.GROWTH DES., 11, 2011
2LOD
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BU of 2lod by Molmil
Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*CP*GP*GP*G)-3')
Authors:Marusic, M, Sket, P, Bauer, L, Viglasky, V, Plavec, J.
Deposit date:2012-01-23
Release date:2012-05-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops.
Nucleic Acids Res., 40, 2012
7ZEM
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BU of 7zem by Molmil
Structure of a parallel G-quadruplex with a snapback loop
Descriptor: DNA (5'-D(*(DT5)P*GP*GP*CP*TP*AP*GP*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7ZEO
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BU of 7zeo by Molmil
Structure of a hybrid-type G-quadruplex with a snapback loop and an all-syn G-column (hybrid-1R)
Descriptor: DNA (5'-D(*(DG5)P*(BGM)P*CP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7ZEK
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BU of 7zek by Molmil
Structure of a hybrid-type G-quadruplex with a snapback loop (hybrid 1R')
Descriptor: DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
Authors:Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
Deposit date:2022-03-31
Release date:2022-06-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
105D
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BU of 105d by Molmil
SOLUTION STRUCTURES OF THE I-MOTIF TETRAMERS OF D(TCC), D(5MCCT) AND D(T5MCC). NOVEL NOE CONNECTIONS BETWEEN AMINO PROTONS AND SUGAR PROTONS
Descriptor: DNA (5'-D(*TP*CP*C)-3')
Authors:Leroy, J.-L, Gueron, M.
Deposit date:1994-12-22
Release date:1995-02-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the i-motif tetramers of d(TCC), d(5methylCCT) and d(T5methylCC): novel NOE connections between amino protons and sugar protons.
Structure, 3, 1995
106D
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BU of 106d by Molmil
Solution structures of the i-motif tetramers of D(TCC), D(5MCCT) and D(T5MCC). Novel NOE connections between amino protons and sugar protons
Descriptor: DNA (5'-D(*MCYP*CP*T)-3')
Authors:Leroy, J.-L, Gueron, M.
Deposit date:1994-12-22
Release date:1995-02-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the i-motif tetramers of d(TCC), d(5methylCCT) and d(T5methylCC): novel NOE connections between amino protons and sugar protons.
Structure, 3, 1995
1NEV
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BU of 1nev by Molmil
A-tract decamer
Descriptor: 5'-D(*CP*CP*GP*TP*TP*TP*TP*GP*CP*C)-3', 5'-D(*GP*GP*CP*AP*AP*AP*AP*CP*GP*G)-3'
Authors:Barbic, A, Zimmer, D.P, Crothers, D.M.
Deposit date:2002-12-11
Release date:2003-03-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural origins of adenine-tract bending
Proc.Natl.Acad.Sci.USA, 100, 2003
179D
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BU of 179d by Molmil
SOLUTION STRUCTURE OF THE D(T-C-G-A) DUPLEX AT ACIDIC PH: A PARALLEL-STRANDED HELIX CONTAINING C+.C, G.G AND A.A PAIRS
Descriptor: DNA (5'-D(*TP*CP*GP*A)-3')
Authors:Wang, Y, Patel, D.J.
Deposit date:1994-06-15
Release date:1994-07-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the d(T-C-G-A) duplex at acidic pH. A parallel-stranded helix containing C+ .C, G.G and A.A pairs.
J.Mol.Biol., 242, 1994
8EDJ
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BU of 8edj by Molmil
Crystal structure of rA3G-ssRNA-GA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*GP*AP*UP*UP*U)-3'), SULFATE ION, ...
Authors:Pacheco, J, Yang, H.J, Li, S.-X, Chen, X.S.
Deposit date:2022-09-04
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
5C3I
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BU of 5c3i by Molmil
Crystal structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2
Descriptor: DNA replication licensing factor MCM2,MCM2, Histone H3.1, Histone H4, ...
Authors:Wang, H, Wang, M, Yang, N, Xu, R.M.
Deposit date:2015-06-17
Release date:2015-07-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2
Protein Cell, 6, 2015

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