Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1P72
DownloadVisualize
BU of 1p72 by Molmil
Crystal structure of EHV4-TK complexed with Thy and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, SULFATE ION, THYMIDINE, ...
Authors:Gardberg, A, Shuvalova, L, Monnerjahn, C, Konrad, M, Lavie, A.
Deposit date:2003-04-30
Release date:2003-11-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the dual thymidine and thymidylate kinase activity of herpes thymidine kinases.
Structure, 11, 2003
7OVR
DownloadVisualize
BU of 7ovr by Molmil
Mature HIV-1 matrix structure
Descriptor: HIV-1 matrix, MYRISTIC ACID, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Qu, K, Ke, Z.L, Zila, V, Anders-Oesswein, M, Glass, B, Muecksch, F, Mueller, R, Schultz, C, Mueller, B, Kraeusslich, H.G, Briggs, J.A.G.
Deposit date:2021-06-15
Release date:2021-08-18
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Maturation of the matrix and viral membrane of HIV-1.
Science, 373, 2021
4HUD
DownloadVisualize
BU of 4hud by Molmil
Structure of the bacteriophage T4 tail terminator protein, gp15.
Descriptor: Tail connector protein Gp15
Authors:Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
Deposit date:2012-11-02
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7001 Å)
Cite:The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
7OVQ
DownloadVisualize
BU of 7ovq by Molmil
Immature HIV-1 matrix structure
Descriptor: Gag polyprotein, MYRISTIC ACID
Authors:Qu, K, Ke, Z.L, Zila, V, Anders-Oesswein, M, Glass, B, Muecksch, F, Mueller, R, Schultz, C, Mueller, B, Kraeusslich, H.G, Briggs, J.A.G.
Deposit date:2021-06-15
Release date:2021-08-18
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Maturation of the matrix and viral membrane of HIV-1.
Science, 373, 2021
6WPZ
DownloadVisualize
BU of 6wpz by Molmil
The structure of Pf4r from a superinfective isolate of the filamentous phage Pf4 of Pseudomonas aeruginosa PA01
Descriptor: CHLORIDE ION, Pf4r
Authors:Michie, K.A, Norrian, P, Duggin, I.G, McDougald, D, Rice, S.A.
Deposit date:2020-04-28
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.993 Å)
Cite:The Repressor C Protein, Pf4r, Controls Superinfection of Pseudomonas aeruginosa PAO1 by the Pf4 Filamentous Phage and Regulates Host Gene Expression.
Viruses, 13, 2021
6WKT
DownloadVisualize
BU of 6wkt by Molmil
Cu(I)-bound Copper Storage Protein BsCsp3
Descriptor: Csp3
Authors:Chen, J.Z, Oken, A, Dennison, C, Lee, J, David, S.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cu(I)-bound Copper Storage Protein BsCsp3
To Be Published
2NNW
DownloadVisualize
BU of 2nnw by Molmil
Alternative conformations of Nop56/58-fibrillarin complex and implication for induced-fit assenly of box C/D RNPs
Descriptor: Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase, NOP5/NOP56 related protein
Authors:Oruganti, S, Zhang, Y, Terns, R, Terns, M.P, Li, H.
Deposit date:2006-10-24
Release date:2007-08-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Alternative Conformations of the Archaeal Nop56/58-Fibrillarin Complex Imply Flexibility in Box C/D RNPs.
J.Mol.Biol., 371, 2007
1P1P
DownloadVisualize
BU of 1p1p by Molmil
[PRO7,13] AA-CONOTOXIN PIVA, NMR, 12 STRUCTURES
Descriptor: AA-CONOTOXIN PIVA
Authors:Han, K.-H, Hwang, K.-J, Kim, S.-M, Kim, S.-K, Gray, W.R, Olivera, B.M, Rivier, J, Shon, K.J.
Deposit date:1996-12-06
Release date:1997-07-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR structure determination of a novel conotoxin, [Pro 7,13] alpha A-conotoxin PIVA.
Biochemistry, 36, 1997
4Q6I
DownloadVisualize
BU of 4q6i by Molmil
Crystal structure of murine 2D5 Fab, a potent anti-CD4 HIV-1-neutralizing antibody in complex with CD4
Descriptor: Heavy chain of murine 2D5 Fab, Light chain of murine 2D5 Fab, T-cell surface glycoprotein CD4
Authors:Boyington, J.C, Nabel, G.J, Mascola, J.R.
Deposit date:2014-04-22
Release date:2014-07-23
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Neutralizing antibodies to HIV-1 envelope protect more effectively in vivo than those to the CD4 receptor.
Sci Transl Med, 6, 2014
6WQW
DownloadVisualize
BU of 6wqw by Molmil
Thermobacillus composti GH10 xylanase
Descriptor: Beta-xylanase, beta-D-xylopyranose
Authors:Briganti, L, Polikarpov, I.
Deposit date:2020-04-29
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Transformation of xylan into value-added biocommodities using Thermobacillus composti GH10 xylanase.
Carbohydr Polym, 247, 2020
1OGP
DownloadVisualize
BU of 1ogp by Molmil
The crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals
Descriptor: (MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI), CESIUM ION, GLYCEROL, ...
Authors:Schrader, N, Fischer, K, Theis, K, Mendel, R.R, Schwarz, G, Kisker, C.
Deposit date:2003-05-08
Release date:2003-10-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Crystal Structure of Plant Sulfite Oxidase Provides Insights Into Sulfite Oxidation in Plants and Animals
Structure, 11, 2003
8FFZ
DownloadVisualize
BU of 8ffz by Molmil
TFIIIA-TFIIIC-Brf1-TBP complex bound to 5S rRNA gene
Descriptor: DNA (151-MER), Transcription factor IIIA, Transcription factor IIIB 70 kDa subunit,TATA-box-binding protein, ...
Authors:Talyzina, A, He, Y.
Deposit date:2022-12-11
Release date:2023-06-21
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of TFIIIC-dependent RNA polymerase III transcription initiation.
Mol.Cell, 83, 2023
8FCW
DownloadVisualize
BU of 8fcw by Molmil
Cryo-EM structure of TnsC-DNA complex in type I-B CAST system
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (60-MER), MAGNESIUM ION, ...
Authors:Chang, L, Wang, S.
Deposit date:2022-12-01
Release date:2023-08-09
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector.
Cell, 186, 2023
8FF4
DownloadVisualize
BU of 8ff4 by Molmil
Cryo-EM structure of Cascade-DNA-TniQ-TnsC complex (composite) in type I-B CAST system
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Non-target DNA strand, ...
Authors:Chang, L, Wang, S.
Deposit date:2022-12-07
Release date:2023-08-09
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector.
Cell, 186, 2023
6WXI
DownloadVisualize
BU of 6wxi by Molmil
Colicin E1 fragment in nanodisc-embedded TolC
Descriptor: Outer membrane protein TolC
Authors:Kaelber, J.T, Budiardjo, S.J, Firlar, E, Ikujuni, A.P, Slusky, J.S.G.
Deposit date:2020-05-10
Release date:2021-05-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Colicin E1 opens its hinge to plug TolC.
Elife, 11, 2022
6WXH
DownloadVisualize
BU of 6wxh by Molmil
Colicin E1 fragment in nanodisc-embedded TolC
Descriptor: Colicin-E1, Outer membrane protein TolC
Authors:Kaelber, J.T, Budiardjo, S.J, Firlar, E, Case, D.A, Ikujuni, A.P, Slusky, J.S.G.
Deposit date:2020-05-10
Release date:2021-05-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Colicin E1 opens its hinge to plug TolC.
Elife, 11, 2022
5FGD
DownloadVisualize
BU of 5fgd by Molmil
Yeast 20S proteasome beta5-H(-2)L-T1A double mutant in complex with Carfilzomib
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-12-20
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome.
Nat Commun, 7, 2016
8FCV
DownloadVisualize
BU of 8fcv by Molmil
Cryo-EM structure of TnsC-TniQ-DNA complex in type I-B CAST system
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (60-MER), MAGNESIUM ION, ...
Authors:Chang, L, Wang, S.
Deposit date:2022-12-01
Release date:2023-08-09
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector.
Cell, 186, 2023
2NNB
DownloadVisualize
BU of 2nnb by Molmil
The Q403K mutant heme domain of flavocytochrome P450 BM3
Descriptor: Bifunctional P-450:NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Clark, J.P, Anderson, J.L.R, Miles, C.S, Mowat, C.G, Reid, G.A, Chapman, S.K.
Deposit date:2006-10-24
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Q403K mutant heme domain of flavocytochrome P450 BM3
To be published
4HP2
DownloadVisualize
BU of 4hp2 by Molmil
Invariom refinement of a new dimeric monoclinic 2 solvate of thiostrepton at 0.64 angstrom resolution
Descriptor: DIMETHYLFORMAMIDE, Thiostrepton, diethyl ether
Authors:Proepper, K, Holstein, J.J, Huebschle, C.B, Bond, C.S, Dittrich, B.
Deposit date:2012-10-23
Release date:2013-10-02
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (0.64 Å)
Cite:Invariom refinement of a new monoclinic solvate of thiostrepton at 0.64 angstrom resolution.
Acta Crystallogr.,Sect.D, 69, 2013
1NO4
DownloadVisualize
BU of 1no4 by Molmil
Crystal Structure of the pre-assembly scaffolding protein gp7 from the double-stranded DNA bacteriophage phi29
Descriptor: HEAD MORPHOGENESIS PROTEIN
Authors:Morais, M.C, Kanamaru, S, Badasso, M.O, Koti, J.S, Owen, B.A.L, McMurray, C.T, Anderson, D.L, Rossmann, M.G.
Deposit date:2003-01-15
Release date:2003-07-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacteriophage f29 scaffolding protein gp7 before and after prohead assembly
Nat.Struct.Biol., 10, 2003
5FGI
DownloadVisualize
BU of 5fgi by Molmil
Yeast 20S proteasome beta1-T1A beta2-T1A double mutant in complex with Carfilzomib
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-12-20
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome.
Nat Commun, 7, 2016
7OJP
DownloadVisualize
BU of 7ojp by Molmil
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 1
Descriptor: 2-[2-(2-chlorophenyl)sulfanylethanoyl-[[4-(1,2,4-triazol-1-yl)phenyl]methyl]amino]-N-methyl-ethanamide, Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase, MAGNESIUM ION
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-17
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021
4Q4Z
DownloadVisualize
BU of 4q4z by Molmil
Thermus thermophilus RNA polymerase de novo transcription initiation complex
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, ADENOSINE-5'-TRIPHOSPHATE, DNA (25-MER), ...
Authors:Murakami, K.S.
Deposit date:2014-04-15
Release date:2014-07-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of transcription initiation by bacterial RNA polymerase holoenzyme.
J.Biol.Chem., 289, 2014
2NN6
DownloadVisualize
BU of 2nn6 by Molmil
Structure of the human RNA exosome composed of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, and Rrp40
Descriptor: 3'-5' exoribonuclease CSL4 homolog, Exosome complex exonuclease RRP4, Exosome complex exonuclease RRP40, ...
Authors:Lima, C.D.
Deposit date:2006-10-23
Release date:2006-12-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Reconstitution, activities, and structure of the eukaryotic RNA exosome.
Cell(Cambridge,Mass.), 127, 2006

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon