PDB: 72678 resultsInfo pagesStatus searchChemie searchBIRD

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1ZFV	The structure of an all-RNA minimal Hairpin Ribozyme with Mutation G8A at the cleavage site Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*AP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*AP*GP*UP*CP*CP*AP*CP*CP*G)-3', ... Authors: Wedekind, J.E. Deposit date: 2005-04-20 Release date: 2006-02-14 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer. Biochemistry, 45, 2006
2NAX	Structure of CCHC zinc finger domain of Pcf11 Descriptor: Protein PCF11, ZINC ION Authors: Yang, F, Varani, G. Deposit date: 2016-01-12 Release date: 2016-11-23 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: The C terminus of Pcf11 forms a novel zinc-finger structure that plays an essential role in mRNA 3'-end processing. RNA, 23, 2017
1ZFX	The Structure of a minimal all-RNA Hairpin Ribozyme with the mutant G8U at the cleavage site Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*UP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*AP*GP*UP*CP*CP*AP*CP*CP*G)-3', ... Authors: Wedekind, J.E. Deposit date: 2005-04-20 Release date: 2006-02-14 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer. Biochemistry, 45, 2006
1ZFT	The crystal structure of an all-RNA minimal Hairpin Ribozyme with mutant G8I at the cleavage site Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*IP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(A2M)P*GP*UP*CP*CP*AP*CP*CP*G)-3', ... Authors: Wedekind, J.E. Deposit date: 2005-04-20 Release date: 2006-02-14 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer. Biochemistry, 45, 2006
1RAW	ATP BINDING RNA APTAMER IN COMPLEX WITH AMP, NMR, 10 STRUCTURES Descriptor: ADENOSINE MONOPHOSPHATE, RNA APTAMER Authors: Dieckmann, T, Feigon, J. Deposit date: 1996-07-17 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution Structure of an ATP-Binding RNA Aptamer Reveals a Novel Fold RNA, 2, 1996
4CND	Crystal structure of E.coli TrmJ Descriptor: DI(HYDROXYETHYL)ETHER, TRNA (CYTIDINE/URIDINE-2'-O-)-METHYLTRANSFERASE TRMJ Authors: Van Laer, B, Somme, J, Roovers, M, Steyaert, J, Droogmans, L, Versees, W. Deposit date: 2014-01-22 Release date: 2014-07-02 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Characterization of Two Homologous 2'-O-Methyltransferases Showing Different Specificities for Their tRNA Substrates. RNA, 20, 2014
4J1G	Leanyer orthobunyavirus nucleoprotein-ssRNA complex Descriptor: Nucleocapsid, RNA (45-MER) Authors: Niu, F, Shaw, N, Wang, Y, Jiao, L, Ding, W, Li, X, Zhu, P, Upur, H, Ouyang, S, Cheng, G, Liu, Z.J. Deposit date: 2013-02-01 Release date: 2013-04-10 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.789 Å) Cite: Structure of the Leanyer orthobunyavirus nucleoprotein-RNA complex reveals unique architecture for RNA encapsidation. Proc.Natl.Acad.Sci.USA, 110, 2013
4CNE	Crystal structure of E.coli TrmJ in complex with S-adenosyl-L- homocysteine Descriptor: DI(HYDROXYETHYL)ETHER, S-ADENOSYL-L-HOMOCYSTEINE, TRNA (CYTIDINE/URIDINE-2'-O-)-METHYLTRANSFERASE TRMJ Authors: Van Laer, B, Somme, J, Roovers, M, Steyaert, J, Droogmans, L, Versees, W. Deposit date: 2014-01-22 Release date: 2014-07-02 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Characterization of Two Homologous 2'-O-Methyltransferases Showing Different Specificities for Their tRNA Substrates. RNA, 20, 2014
8C49	Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for 3-Methyl-L-histidine, bound to AMPPNP Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... Authors: Hardy, F.J, Levy, C.W. Deposit date: 2023-01-03 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Engineering mutually orthogonal PylRS/tRNA pairs for dual encoding of functional histidine analogues. Protein Sci., 32, 2023
1ZDH	MS2 COAT PROTEIN/RNA COMPLEX Descriptor: PROTEIN (BACTERIOPHAGE MS2 COAT PROTEIN), RNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*U P*GP*U)-3') Authors: Valegard, K, Van Den Worm, S, Liljas, L. Deposit date: 1996-09-24 Release date: 1997-04-21 Last modified: 2023-04-19 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions. J.Mol.Biol., 270, 1997
1Z31	The structure of an enzyme-activating fragment of human telomerase RNA Descriptor: human telomerase PJ6 hairpin Authors: Leeper, T.C, Varani, G. Deposit date: 2005-03-10 Release date: 2005-03-22 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: The structure of an enzyme-activating fragment of human telomerase RNA. RNA, 11, 2005
8B4Z	Rosellinia necatrix megabirnavirus 1-W779 full capsid Descriptor: Major capsid protein A Authors: Wang, H, Okamoto, K, Miyazaki, N, Suzuki, N. Deposit date: 2022-09-21 Release date: 2023-02-22 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Capsid structure of a fungal dsRNA megabirnavirus reveals its previously unidentified surface architecture. Plos Pathog., 19, 2023
8B59	Rosellinia necatrix megabirnavirus 1-W779 Crown protein Descriptor: RnMBV1 Crown protein Authors: Wang, H, Okamoto, K, Miyazaki, N, Suzuki, N. Deposit date: 2022-09-22 Release date: 2023-02-22 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Capsid structure of a fungal dsRNA megabirnavirus reveals its previously unidentified surface architecture. Plos Pathog., 19, 2023
2Y95	Solution structure of AUCG tetraloop hairpin found in human Xist RNA A-repeats essential for X-inactivation Descriptor: 5'-R(*GP*GP*CP*GP*CP*AP*UP*CP*GP*GP*CP*GP*CP*C)-3' Authors: Duszczyk, M.M, Sattler, M. Deposit date: 2011-02-11 Release date: 2011-10-26 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: The Xist RNA A-Repeat Comprises a Novel Aucg Tetraloop Fold and a Platform for Multimerization. RNA, 17, 2011
8D5J	The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd Descriptor: Beta-2-microglobulin, MHC class I heavy chain maturation peptide H-2K(D), Pre-mRNA-processing factor 19 Authors: Custodio, J.M.F, Baker, B.M. Deposit date: 2022-06-04 Release date: 2022-07-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.95 Å) Cite: The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd To Be Published
1NZ1	Solution structure of the S. cerevisiae U6 Intramolecular stem-loop containing an SP phosphorothioate at nucleotide U80 Descriptor: SP U6 Intramolecular Stem-Loop RNA Authors: Reiter, N.J, Nikstad, L.J, Allman, A.M, Johnson, R.J, Butcher, S.E. Deposit date: 2003-02-14 Release date: 2003-05-13 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of the U6 RNA intramolecular stem-loop harboring an S(P)-phosphorothioate modification. RNA, 9, 2003
1ZDJ	STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX Descriptor: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(*GP*GP*AP*UP*CP*AP*CP*C)-3') Authors: Grahn, E, Stonehouse, N, Valegard, K, Vandenworm, S, Liljas, L. Deposit date: 1997-12-18 Release date: 1998-07-08 Last modified: 2023-04-19 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystallographic studies of RNA hairpins in complexes with recombinant MS2 capsids: implications for binding requirements. RNA, 5, 1999
1ZDK	STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX Descriptor: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3') Authors: Grahn, E, Stonehouse, N.J, Valegard, K, Vandenworm, S, Liljas, L. Deposit date: 1998-12-04 Release date: 1998-12-07 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.86 Å) Cite: Crystallographic studies of RNA hairpins in complexes with recombinant MS2 capsids: implications for binding requirements. RNA, 5, 1999
6NS0	Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis complexed with L-lysine and Cladosporin Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2019-01-24 Release date: 2019-02-06 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis with complexed with L-lysine and Cladosporin to be published
6NRZ	Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis complexed with L-lysine and Adenosine Descriptor: 1,2-ETHANEDIOL, ADENOSINE, CHLORIDE ION, ... Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2019-01-24 Release date: 2019-02-20 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis with complexed with L-lysine and Adenosine to be published
117D	CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG) Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3') Authors: Bingman, C.A, Jain, S, Zon, G, Sundaralingam, M. Deposit date: 1993-02-10 Release date: 1993-04-15 Last modified: 2023-03-22 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG). Nucleic Acids Res., 20, 1992
6NCR	Crystal Structure of Tryptophan-tRNA ligase from Chlamydia trachomatis with bound L-tryptophan Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ... Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2018-12-12 Release date: 2018-12-26 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Crystal Structure of Tryptophan-tRNA ligase from Chlamydia trachomatis with bound L-tryptophan to be published
6O3F	Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis with complexed with L-lysine and a difluoro cyclohexyl chromone ligand Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, LYSINE, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2019-02-26 Release date: 2019-03-27 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis with complexed with L-lysine and a difluoro cyclohexyl chromone ligand to be published
1YID	Crystal structure of tryptophanyl tRNA synthetase II from Deinococcus radiodurans in complex with ATP. Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tryptophanyl-tRNA synthetase Authors: Buddha, M.R, Crane, B.R. Deposit date: 2005-01-11 Release date: 2005-08-02 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structures of tryptophanyl-tRNA synthetase II from Deinococcus radiodurans bound to ATP and tryptophan. Insight into subunit cooperativity and domain motions linked to catalysis J.Biol.Chem., 280, 2005
3ICA	The crystal structure of the beta subunit of a phenylalanyl-tRNA synthetase from Porphyromonas gingivalis W83 Descriptor: GLYCEROL, Phenylalanyl-tRNA synthetase beta chain, TRIS(HYDROXYETHYL)AMINOMETHANE Authors: Fan, Y, Sather, A, Keigher, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2009-07-17 Release date: 2009-07-28 Last modified: 2017-11-01 Method: X-RAY DIFFRACTION (2.44 Å) Cite: The crystal structure of the beta subunit of a phenylalanyl-tRNA synthetase from Porphyromonas gingivalis W83 To be Published

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