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2QET
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BU of 2qet by Molmil
Structure of the mutant S211A of the ribosome inactivating protein PDL4 from P. dioica in complex with adenine
Descriptor: ADENINE, Ribosome-inactivating protein PD-L4
Authors:Ruggiero, A, Berisio, R.
Deposit date:2007-06-26
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
2R3D
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BU of 2r3d by Molmil
Ricin A-chain (recombinant) complex with Acetamide
Descriptor: ACETAMIDE, Ricin A chain (EC 3.2.2.22), SULFATE ION
Authors:Carra, J.H, McHugh, C.A, Mulligan, S, Machiesky, L.M, Soares, A.S, Millard, C.B.
Deposit date:2007-08-29
Release date:2007-11-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site
BMC Struct.Biol., 7, 2007
2QES
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BU of 2qes by Molmil
Crystal structure of the ribosome inactivating protein PDL4 from P. dioica leaves in complex with adenine
Descriptor: ADENINE, Ribosome-inactivating protein PD-L4
Authors:Ruggiero, A, Berisio, R.
Deposit date:2007-06-26
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
2R2X
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BU of 2r2x by Molmil
Ricin A-chain (recombinant) complex with Urea
Descriptor: Ricin A chain, SULFATE ION, UREA
Authors:Carra, J.H, McHugh, C.A, Mulligan, S, Machiesky, L.M, Soares, A.S, Millard, C.B.
Deposit date:2007-08-28
Release date:2007-11-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site.
Bmc Struct.Biol., 7, 2007
2VC4
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BU of 2vc4 by Molmil
Ricin A-Chain (Recombinant) E177D Mutant
Descriptor: GLYCEROL, RICIN A CHAIN, SULFATE ION
Authors:Marsden, C.J, Fulop, V.
Deposit date:2007-09-18
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:The Isolation and Characterisation of Temperature-Dependent Ricin a Chain Molecules in Saccharomyces Cerevisiae
FEBS J., 274, 2007
2VC3
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BU of 2vc3 by Molmil
Ricin A-Chain (Recombinant) E177D Mutant with a bound acetate
Descriptor: ACETATE ION, RICIN A CHAIN, SULFATE ION
Authors:Marsden, C.J, Fulop, V.
Deposit date:2007-09-18
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Isolation and Characterisation of Temperature-Dependent Ricin a Chain Molecules in Saccharomyces Cerevisiae
FEBS J., 274, 2007
3MY6
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BU of 3my6 by Molmil
Crystal Structure of the complex of type 1 ribosome inactivating protein with 7-methylguanine at 2.65 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one, Ribosome-inactivating protein momordin I
Authors:Kushwaha, G.S, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-05-10
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of the complex of type 1 ribosome inactivating protein with 7-methylguanine at 2.65 A resolution
To be Published
3N2D
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BU of 3n2d by Molmil
Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-meric peptide from 60S acidic ribosomal protein P2-beta, Ribosome inactivating protein
Authors:Kushwaha, G.S, Prem Kumar, R, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-05-18
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution
To be Published
3N5D
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BU of 3n5d by Molmil
Crystal structure of the complex of type I ribosome inactivating protein with glucose at 1.9A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Pandey, N, Kushwaha, G.S, Sinha, M, Kaur, P, Betzel, C, Sharma, S, Singh, T.P.
Deposit date:2010-05-25
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the complex of type I ribosome inactivating protein with glucose at 1.9A resolution
To be Published
3N1N
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BU of 3n1n by Molmil
Crystal structure of the complex of type I ribosome inactivating protein with guanine at 2.2A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GUANINE, Ribosome inactivating protein
Authors:Kushwaha, G.S, Singh, N, Sinha, M, Kaur, P, Betzel, C, Sharma, S, Singh, T.P.
Deposit date:2010-05-16
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structures of a type-1 ribosome inactivating protein from Momordica balsamina in the bound and unbound states
Biochim.Biophys.Acta, 1824, 2012
3N3X
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BU of 3n3x by Molmil
Crystal Structure of the complex formed between type I ribosome inactivating protein and hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 1.7 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GUANINE, Ribosome inactivating protein, ...
Authors:Kushwaha, G.S, Vikram, G, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-05-20
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the complex formed between type I ribosome inactivating protein and hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 1.7 A resolution
To be Published
3NJS
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BU of 3njs by Molmil
Crystal structure of the complex formed between typeI ribosome inactivating protein and lactose at 2.1A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Pandey, N, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-18
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the complex formed between typeI ribosome inactivating protein and lactose at 2.1A resolution
To be Published
3NFM
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BU of 3nfm by Molmil
Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Kushwaha, G.S, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-10
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution
To be Published
3NX9
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BU of 3nx9 by Molmil
Crystal structure of type I ribosome inactivating protein in complex with maltose at 1.7A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Pandey, N, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-07-13
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of type I ribosome inactivating protein in complex with maltose at 1.7A resolution
To be Published
3PX9
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BU of 3px9 by Molmil
RTA in complex with N-(furanylmethyl)-7-carbamoyl-pterin
Descriptor: 2-amino-N-(furan-2-ylmethyl)-4-oxo-3,4-dihydropteridine-7-carboxamide, Preproricin
Authors:Jasheway, K.R, Robertus, J.D.
Deposit date:2010-12-09
Release date:2011-06-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:7-Substituted pterins provide a new direction for ricin A chain inhibitors.
Eur.J.Med.Chem., 46, 2011
3PX8
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BU of 3px8 by Molmil
RTA in complex with 7-carboxy-pterin
Descriptor: 2-amino-4-oxo-1,4-dihydropteridine-7-carboxylic acid, Preproricin
Authors:Jasheway, K.R, Robertus, J.D.
Deposit date:2010-12-09
Release date:2011-06-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:7-Substituted pterins provide a new direction for ricin A chain inhibitors.
Eur.J.Med.Chem., 46, 2011
3Q4P
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BU of 3q4p by Molmil
Crystal structure of the complex of type I ribosome inactivating protein with 7n-methyl -8-hydroguanosine-5-p-diphosphate at 1.8 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Kushwaha, G.S, Yamini, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-12-24
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the complex of type I ribosome inactivating protein with 7n-methyl-8-hydroguanosine-5-p-diphosphate at 1.8 A resolution
To be Published
3QJI
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BU of 3qji by Molmil
Crystal structure of the complex of ribosome inactivating protein with 7-methylguanosine triphosphate at 1.75A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Ribosome inactivating protein
Authors:Kumar, M, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-01-29
Release date:2011-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the complex of ribosome inactivating protein with 7-methylguanosine triphosphate at 1.75A resolution
TO BE PUBLISHED
3RL9
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BU of 3rl9 by Molmil
Crystal Structure of the complex of type I RIP with the hydrolyzed product of dATP, adenine at 1.9 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, GLYCEROL, ...
Authors:Kushwaha, G.S, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-04-19
Release date:2011-05-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of a type-1 ribosome inactivating protein from Momordica balsamina in the bound and unbound states
Biochim.Biophys.Acta, 1824, 2012
7Y4M
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BU of 7y4m by Molmil
Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-phenylalanyl-N6-((benzyloxy)carbonyl)-L-lysine
Descriptor: (2S)-2-[[(2S)-2-[2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]ethanoylamino]-3-phenyl-propanoyl]amino]-6-(phenylmethoxycarbonylamino)hexanoic acid, Ricin A chain, SULFATE ION
Authors:Katakura, S, Goto, M, Ohba, T, Kawata, R, Nagatsu, K, Higashi, S, Matsumoto, K, Kurisu, K, Ohtsuka, K, Saito, R.
Deposit date:2022-06-15
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Pterin-based small molecule inhibitor capable of binding to the secondary pocket in the active site of ricin-toxin A chain.
Plos One, 17, 2022
7Y4K
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BU of 7y4k by Molmil
Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-phenylalanyl-N6-((benzyloxy)carbonyl)-L-ornitine
Descriptor: (2S)-2-[[(2S)-2-[2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]ethanoylamino]-3-phenyl-propanoyl]amino]-5-(phenylmethoxycarbonylamino)pentanoic acid, Ricin A chain, SULFATE ION
Authors:Katakura, S, Goto, M, Ohba, T, Kawata, R, Nagatsu, K, Higashi, S, Matsumoto, K, Kurisu, K, Ohtsuka, K, Saito, R.
Deposit date:2022-06-15
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Pterin-based small molecule inhibitor capable of binding to the secondary pocket in the active site of ricin-toxin A chain.
Plos One, 17, 2022
7Y05
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BU of 7y05 by Molmil
Crystal structure of Ricin A chain bound with (R)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-2-phenylacetic acid
Descriptor: (2R)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-2-phenyl-ethanoic acid, Ricin A chain, SULFATE ION
Authors:Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
Deposit date:2022-06-03
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
7Y03
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BU of 7y03 by Molmil
Crystal structure of Ricin A chain bound with (S)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-2-phenylacetic acid
Descriptor: (2S)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-2-phenyl-ethanoic acid, Ricin A chain, SULFATE ION
Authors:Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
Deposit date:2022-06-03
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
7Y06
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BU of 7y06 by Molmil
Crystal structure of Ricin A chain bound with (S)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-4-phenylbutanoic acid
Descriptor: (2S)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-4-phenyl-butanoic acid, Ricin A chain, SULFATE ION
Authors:Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
Deposit date:2022-06-03
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022
7XZW
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BU of 7xzw by Molmil
Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-D-phenylalanine
Descriptor: (2R)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-3-phenyl-propanoic acid, Ricin A chain, SULFATE ION
Authors:Goto, M, Higashi, S, Ohba, T, Kawata, R, Nagatsu, K, Suzuki, S, Saito, R.
Deposit date:2022-06-03
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Conformational change in ricin toxin A-Chain: A critical factor for inhibitor binding to the secondary pocket.
Biochem.Biophys.Res.Commun., 627, 2022

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