PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

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4PY7	Crystal Structure of Fab 3.1 Descriptor: antibody 3.1 heavy chain, antibody 3.1 light chain Authors: Dreyfus, C. Deposit date: 2014-03-26 Release date: 2014-05-21 Last modified: 2014-06-04 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Alternative Recognition of the Conserved Stem Epitope in Influenza A Virus Hemagglutinin by a VH3-30-Encoded Heterosubtypic Antibody. J.Virol., 88, 2014
3ODZ	Crystal structure of P38alpha Y323R active mutant Descriptor: Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside Authors: Livnah, O, Tzarum, N. Deposit date: 2010-08-12 Release date: 2011-01-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Active mutants of the TCR-mediated p38alpha alternative activation site show changes in the phosphorylation lip and DEF site formation. J.Mol.Biol., 405, 2011
3OV9	Structure of the Nucleoprotein from Rift Valley Fever Virus Descriptor: NITRITE ION, Nucleoprotein, SODIUM ION Authors: Ferron, F, Danek, E.I, Li, Z, Luo, D, Wong, Y.H, Coutard, B, Lantez, V, Charrel, R, Canard, B, Walz, T, Lescar, J. Deposit date: 2010-09-16 Release date: 2011-05-25 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: The hexamer structure of Rift Valley fever virus nucleoprotein suggests a mechanism for its assembly into ribonucleoprotein complexes Plos Pathog., 7, 2011
2MTG	Solution structure of the RRM1 of human LARP6 Descriptor: La-related protein 6 Authors: Martino, L, Atkinson, A.R, Kelly, G, Conte, M.R. Deposit date: 2014-08-18 Release date: 2014-12-24 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Synergic interplay of the La motif, RRM1 and the interdomain linker of LARP6 in the recognition of collagen mRNA expands the RNA binding repertoire of the La module. Nucleic Acids Res., 43, 2015
7OA4	Crystal structure of the N-terminal endonuclease domain of La Crosse virus L-protein bound to compound L-742,001 Descriptor: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, FORMIC ACID, MANGANESE (II) ION, ... Authors: Feracci, M, Hernandez, S, Vincentelli, R, Ferron, F, Reguera, J, Canard, B, Alvarez, K. Deposit date: 2021-04-19 Release date: 2022-08-03 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystal structure of the N-terminal endonuclease domain of La Crosse virus L-protein bound to compound L-742,001 To Be Published
3K5M	Crystal structure of E.coli Pol II-abasic DNA-ddGTP Lt(-2, 2) ternary complex Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*TP*CP*CP*TP*GP*(3DR)P*AP*CP*GP*CP*TP*AP*GP*GP*CP*AP*CP*A)-3'), ... Authors: Yang, W, Wang, F. Deposit date: 2009-10-07 Release date: 2010-02-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Structural insight into translesion synthesis by DNA Pol II. Cell(Cambridge,Mass.), 139, 2009
6IB7	Structure of wild type SuhB Descriptor: GLYCEROL, Inositol-1-monophosphatase, MAGNESIUM ION Authors: Huang, Y.H, Loll, B, Wahl, M.C. Deposit date: 2018-11-29 Release date: 2019-04-17 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.245 Å) Cite: Structural basis for the function of SuhB as a transcription factor in ribosomal RNA synthesis. Nucleic Acids Res., 47, 2019
8A22	Structure of the mitochondrial ribosome from Polytomella magna Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ... Authors: Tobiasson, V, Berzina, I, Amunts, A. Deposit date: 2022-06-02 Release date: 2022-11-16 Last modified: 2022-11-23 Method: ELECTRON MICROSCOPY (2.91 Å) Cite: Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements. Nat Commun, 13, 2022
4CYJ	Chaetomium thermophilum Pan2:Pan3 complex Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3-LIKE PROTEIN, ... Authors: Wolf, J, Valkov, E, Allen, M.D, Meineke, B, Gordiyenko, Y, McLaughlin, S.H, Olsen, T.M, Robinson, C.V, Bycroft, M, Stewart, M, Passmore, L.A. Deposit date: 2014-04-11 Release date: 2014-06-11 Last modified: 2014-07-30 Method: X-RAY DIFFRACTION (2.59 Å) Cite: Structural Basis for Pan3 Binding to Pan2 and its Function in Mrna Recruitment and Deadenylation Embo J., 33, 2014
2KVI	Structure of Nab3 RRM Descriptor: Nuclear polyadenylated RNA-binding protein 3 Authors: Pergoli, R, Kubicek, K, Hobor, F, Pasulka, J, Stefl, R. Deposit date: 2010-03-15 Release date: 2010-11-17 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure and RNA-binding study of RNA-recognition motif of Nab3 J.Biol.Chem., 2010
4J3K	Structure of the N-terminal domian of human coronavirus OC43 nucleocapsid protein Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Nucleoprotein Authors: Chen, I.J, Lin, S.Y, Hou, M.H. Deposit date: 2013-02-05 Release date: 2013-05-08 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure-based exploration of the important role of Arg106 in the RNA-binding domain of human coronavirus OC43 nucleocapsid protein Biochim.Biophys.Acta, 1834, 2013
1TRJ	Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome Descriptor: Guanine nucleotide-binding protein beta subunit-like protein, Helix 39 of 18S rRNA, Helix 40 of 18S rRNA Authors: Sengupta, J, Nilsson, J, Gursky, R, Spahn, C.M, Nissen, P, Frank, J. Deposit date: 2004-06-21 Release date: 2004-09-28 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (11.7 Å) Cite: Identification of the versatile scaffold protein RACK1 on the eukaryotic ribosome by cryo-EM Nat.Struct.Mol.Biol., 11, 2004
8QLP	CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex Descriptor: DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3'), MAGNESIUM ION, RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), ... Authors: Finocchio, G, Koopal, B, Potocnik, A, Heijstek, C, Jinek, M, Swarts, D. Deposit date: 2023-09-20 Release date: 2024-01-31 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA. Nucleic Acids Res., 52, 2024
7K06	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: CYTIDINE-5'-MONOPHOSPHATE, ERI1 exoribonuclease 3, MAGNESIUM ION Authors: Thapar, R, Arvai, A.S, Tainer, J.A. Deposit date: 2020-09-03 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases To Be Published
7K07	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, MANGANESE (II) ION Authors: Thapar, R, Arvai, A.S, Tainer, J.A. Deposit date: 2020-09-03 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases To Be Published
7K05	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ... Authors: Thapar, R, Andrew, A.S, Tainer, J.A. Deposit date: 2020-09-03 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases To Be Published
6P2H	Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches Descriptor: 2'-DEOXY-GUANOSINE, COBALT HEXAMMINE(III), MAGNESIUM ION, ... Authors: Matyjasik, M.M, Batey, R.T. Deposit date: 2019-05-21 Release date: 2019-10-23 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.803 Å) Cite: Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches. Nucleic Acids Res., 47, 2019
2M1A	HIV-1 Rev ARM peptide (residues T34-R50) Descriptor: HIV-1 Rev arginine-rich motif (ARM) Authors: Casu, F, Duggan, B.M, Hennig, M. Deposit date: 2012-11-21 Release date: 2013-09-11 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: The Arginine-Rich RNA-Binding Motif of HIV-1 Rev Is Intrinsically Disordered and Folds upon RRE Binding. Biophys.J., 105, 2013
3TD1	Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticin Descriptor: GENETICIN, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3') Authors: Kondo, J. Deposit date: 2011-08-10 Release date: 2011-12-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: A structural basis for the antibiotic resistance conferred by an A1408G mutation in 16S rRNA and for the antiprotozoal activity of aminoglycosides Angew.Chem.Int.Ed.Engl., 51, 2012
7NYQ	Crystal structure of the Mei-P26 NHL domain Descriptor: Meiotic P26, isoform C Authors: Salerno-Kochan, A, Gaik, M, Medenbach, J, Glatt, S. Deposit date: 2021-03-23 Release date: 2022-05-04 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26. Life Sci Alliance, 5, 2022
4N0O	Complex structure of Arterivirus nonstructural protein 10 (helicase) with DNA Descriptor: CALCIUM ION, DNA, Replicase polyprotein 1ab, ... Authors: Deng, Z, Chen, Z. Deposit date: 2013-10-02 Release date: 2014-01-08 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Structural basis for the regulatory function of a complex zinc-binding domain in a replicative arterivirus helicase resembling a nonsense-mediated mRNA decay helicase. Nucleic Acids Res., 42, 2014
7LPY	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ... Authors: Thapar, R, Andrew, A.S, Tainer, J.A. Deposit date: 2021-02-12 Release date: 2022-02-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases To Be Published
7LPZ	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ... Authors: Thapar, R, Andrew, A.S, Tainer, J.A. Deposit date: 2021-02-12 Release date: 2022-02-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases To Be Published
7LQ0	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ... Authors: Thapar, R, Andrew, A.S, Tainer, J.A. Deposit date: 2021-02-12 Release date: 2022-02-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases To Be Published
4A76	The Lin28b Cold shock domain in complex with heptathymidine Descriptor: 5'-D(*TP*TP*TP*TP*TP*TP*TP)-3', LIN28 COLD SHOCK DOMAIN Authors: Mayr, F, Schuetz, A, Doege, N, Heinemann, U. Deposit date: 2011-11-11 Release date: 2012-09-05 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.92 Å) Cite: The Lin28 Cold-Shock Domain Remodels Pre-Let-7 Microrna. Nucleic Acids Res., 40, 2012

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