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1L8L
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Molecular basis for the local confomational rearrangement of human phosphoserine phosphatase
Descriptor: D-2-AMINO-3-PHOSPHONO-PROPIONIC ACID, L-3-phosphoserine phosphatase
Authors:Kim, H.Y, Heo, Y.S, Kim, J.H, Park, M.H, Moon, J, Park, S.Y, Lee, T.G, Jeon, Y.H, Ro, S, Hwang, K.Y.
Deposit date:2002-03-21
Release date:2003-04-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Molecular basis for the local conformational rearrangement of human phosphoserine phosphatase.
J.Biol.Chem., 277, 2002
1LKP
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Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(II) form, azide adduct
Descriptor: AZIDE ION, FE (II) ION, Rubrerythrin
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2002-04-25
Release date:2002-09-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme Diiron Peroxidase
J.Am.Chem.Soc., 124, 2002
1MXD
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Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
Deposit date:2002-10-02
Release date:2003-06-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
1MXG
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Crystal Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei in complex with acarbose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
Deposit date:2002-10-02
Release date:2003-06-10
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
1N1D
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Glycerol-3-phosphate cytidylyltransferase complexed with CDP-glycerol
Descriptor: SULFATE ION, [CYTIDINE-5'-PHOSPHATE] GLYCERYLPHOSPHORIC ACID ESTER, glycerol-3-phosphate cytidylyltransferase
Authors:Pattridge, K.A, Weber, C.H, Friesen, J.A, Sankar, S, Kent, C, Ludwig, M.L.
Deposit date:2002-10-17
Release date:2003-11-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glycerol-3-phosphate cytidylyltransferase. Structural changes induced by binding of CDP-glycerol and the role of lysine residues in catalysis
J.Biol.Chem., 278, 2003
1MSA
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MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS COMPLEXED WITH METHYL-ALPHA-D-MANNOSIDE
Descriptor: AGGLUTININ, methyl alpha-D-mannopyranoside
Authors:Wright, C.S, Hester, G.
Deposit date:1995-03-06
Release date:1995-09-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure of mannose-specific snowdrop (Galanthus nivalis) lectin is representative of a new plant lectin family.
Nat.Struct.Biol., 2, 1995
8B9X
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Chimeric protein of human UFM1 E3 ligase, UFL1, and DDRGK1
Descriptor: CHLORIDE ION, DDRGK domain-containing protein 1,E3 UFM1-protein ligase 1
Authors:Wiener, R, Isupov, M, banerjee, S.
Deposit date:2022-10-10
Release date:2023-10-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.066 Å)
Cite:Structural study of UFL1-UFC1 interaction uncovers the role of UFL1 N-terminal helix in ufmylation.
Embo Rep., 24, 2023
5K39
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BU of 5k39 by Molmil
THE TYPE II COHESIN DOCKERIN COMPLEX FROM CLOSTRIDIUM THERMOCELLUM
Descriptor: CALCIUM ION, Cellulosome anchoring protein cohesin region, Dockerin module from a protein of unknown function
Authors:Viegas, A, Pinheiro, B, Bras, J.L.A, Romao, M.J, Alves, V, Carvalho, A.L, Fontes, C.M.G.A.
Deposit date:2016-05-19
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Diverse specificity of cellulosome attachment to the bacterial cell surface.
Sci Rep, 6, 2016
1SPA
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BU of 1spa by Molmil
ROLE OF ASP222 IN THE CATALYTIC MECHANISM OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE: THE AMINO ACID RESIDUE WHICH ENHANCES THE FUNCTION OF THE ENZYME-BOUND COENZYME PYRIDOXAL 5'-PHOSPHATE
Descriptor: ASPARTATE AMINOTRANSFERASE, N-METHYL-4-DEOXY-4-AMINO-PYRIDOXAL-5-PHOSPHATE
Authors:Hinoue, Y, Yano, T, Metzler, D.E, Miyahara, I, Hirotsu, K, Kagamiyama, H.
Deposit date:1993-01-26
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase: the amino acid residue which enhances the function of the enzyme-bound coenzyme pyridoxal 5'-phosphate.
Biochemistry, 31, 1992
1DJ1
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BU of 1dj1 by Molmil
CRYSTAL STRUCTURE OF R48A MUTANT OF CYTOCHROME C PEROXIDASE
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hirst, J, Goodin, D.B.
Deposit date:1999-11-30
Release date:1999-12-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Unusual oxidative chemistry of N(omega)-hydroxyarginine and N-hydroxyguanidine catalyzed at an engineered cavity in a heme peroxidase.
J.Biol.Chem., 275, 2000
1ENC
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BU of 1enc by Molmil
CRYSTAL STRUCTURES OF THE BINARY CA2+ AND PDTP COMPLEXES AND THE TERNARY COMPLEX OF THE ASP 21->GLU MUTANT OF STAPHYLOCOCCAL NUCLEASE. IMPLICATIONS FOR CATALYSIS AND LIGAND BINDING
Descriptor: CALCIUM ION, STAPHYLOCOCCAL NUCLEASE, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Libson, A, Gittis, A, Lattman, E.E.
Deposit date:1994-02-14
Release date:1994-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of the binary Ca2+ and pdTp complexes and the ternary complex of the Asp21-->Glu mutant of staphylococcal nuclease. Implications for catalysis and ligand binding.
Biochemistry, 33, 1994
3S6M
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BU of 3s6m by Molmil
The structure of a Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Peptidyl-prolyl cis-trans isomerase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-05-25
Release date:2011-06-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:The structure of a Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei
TO BE PUBLISHED
1R1C
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BU of 1r1c by Molmil
PSEUDOMONAS AERUGINOSA W48F/Y72F/H83Q/Y108W-AZURIN RE(PHEN)(CO)3(HIS107)
Descriptor: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (I) ION
Authors:Miller, J.E, Gradinaru, C, Crane, B.R, Di Bilio, A.J.
Deposit date:2003-09-23
Release date:2003-09-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Spectroscopy and reactivity of a photogenerated tryptophan radical in a structurally defined protein environment
J.Am.Chem.Soc., 125, 2003
1EVW
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BU of 1evw by Molmil
L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.
Descriptor: DNA (5'-D(*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*TP*AP*CP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), ...
Authors:Galburt, E.A, Jurica, M.S, Chevalier, B.S, Erho, D, Stoddard, B.L.
Deposit date:2000-04-20
Release date:2000-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Conformational changes and cleavage by the homing endonuclease I-PpoI: a critical role for a leucine residue in the active site.
J.Mol.Biol., 300, 2000
1O8F
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BU of 1o8f by Molmil
Pectate Lyase C from Erwinia Chrysanthemi at pH 9.5 with 30mM Ca2+
Descriptor: CALCIUM ION, PECTATE LYASE C
Authors:Herron, S.R, Jurnak, F.A.
Deposit date:2002-11-27
Release date:2003-01-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization and Implications of Ca2+ Binding to Pectate Lyase C
J.Biol.Chem., 278, 2003
8CJB
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BU of 8cjb by Molmil
A268M variant of the CODH/ACS complex of C. hydrogenoformans
Descriptor: ACETATE ION, CO-methylating acetyl-CoA synthase, Carbon monoxide dehydrogenase, ...
Authors:Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
Deposit date:2023-02-13
Release date:2024-02-21
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Coupling CO 2 Reduction and Acetyl-CoA Formation: The Role of a CO Capturing Tunnel in Enzymatic Catalysis.
Angew.Chem.Int.Ed.Engl., 63, 2024
7NA6
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BU of 7na6 by Molmil
Cryo-EM structure of AAV True Type
Descriptor: Capsid protein VP1
Authors:Bennett, A.D, McKenna, R.
Deposit date:2021-06-19
Release date:2021-09-29
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Comparative structural, biophysical, and receptor binding study of true type and wild type AAV2.
J.Struct.Biol., 213, 2021
1RCJ
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BU of 1rcj by Molmil
Crystal structure of E166A mutant of SHV-1 beta-lactamase with the trans-enamine intermediate of tazobactam
Descriptor: Beta-lactamase SHV-1, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE, TAZOBACTAM TRANS-ENAMINE INTERMEDIATE
Authors:Padayatti, P.S, Helfand, M.S, Totir, M.A, Carey, M.P, Hujer, A.M, Carey, P.R, Bonomo, R.A, van den Akker, F.
Deposit date:2003-11-04
Release date:2004-02-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Tazobactam Forms a Stoichiometric trans-Enamine Intermediate in the E166A Variant of SHV-1 beta-Lactamase: 1.63 A Crystal Structure
Biochemistry, 43, 2004
8CGX
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structure of HEX-1 from N. crassa crystallized in cellulo, diffracted at 100K and resolved using XDS
Descriptor: Woronin body major protein
Authors:Boger, J, Schoenherr, R, Lahey-Rudolph, J.M, Harms, M, Kaiser, J, Nachtschatt, S, Wobbe, M, Koenig, P, Bourenkov, G, Schneider, T, Redecke, L.
Deposit date:2023-02-06
Release date:2024-02-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A streamlined approach to structure elucidation using in cellulo crystallized recombinant proteins, InCellCryst.
Nat Commun, 15, 2024
3SNZ
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BU of 3snz by Molmil
Crystal structure of a mutant W39D of a betagamma-crystallin domain from Clostridium beijerinckii
Descriptor: CALCIUM ION, Clostrillin
Authors:Srivastava, S.S, Sankaranarayanan, R.
Deposit date:2011-06-29
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Decoding the molecular design principles underlying Ca(2+) binding to beta gamma-crystallin motifs
J.Mol.Biol., 415, 2012
8CGY
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BU of 8cgy by Molmil
Trypanosoma brucei IMP dehydrogenase (ori) crystallized in High Five cells reveals native ligands ATP, GDP and phosphate. Diffraction data collection at 100 K in cellulo; XDS processing
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, ...
Authors:Boger, J, Schoenherr, R, Lahey-Rudolph, J.M, Harms, M, Kaiser, J, Nachtschatt, S, Wobbe, M, Duden, R, Bourenkov, G, Schneider, T, Redecke, L.
Deposit date:2023-02-06
Release date:2024-02-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:A streamlined approach to structure elucidation using in cellulo crystallized recombinant proteins, InCellCryst.
Nat Commun, 15, 2024
8CD5
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BU of 8cd5 by Molmil
structure of HEX-1 from N. crassa crystallized in cellulo, diffracted at 100K and resolved using CrystFEL
Descriptor: Woronin body major protein
Authors:Boger, J, Schoenherr, R, Lahey-Rudolph, J.M, Harms, M, Kaiser, J, Nachtschatt, S, Wobbe, M, Koenig, P, Bourenkov, G, Schneider, T, Redecke, L.
Deposit date:2023-01-30
Release date:2024-02-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:A streamlined approach to structure elucidation using in cellulo crystallized recombinant proteins, InCellCryst.
Nat Commun, 15, 2024
5KHA
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BU of 5kha by Molmil
Structure of glutamine-dependent NAD+ synthetase from Acinetobacter baumannii in complex with adenosine diphosphate (ADP)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-06-14
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of glutamine-dependent NAD+ synthetase from Acinetobacter baumannii in complex with adenosine diphosphate (ADP)
to be published
1NNA
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THREE-DIMENSIONAL STRUCTURE OF INFLUENZA A N9 NEURAMINIDASE AND ITS COMPLEX WITH THE INHIBITOR 2-DEOXY 2,3-DEHYDRO-N-ACETYL NEURAMINIC ACID
Descriptor: CALCIUM ION, NEURAMINIDASE
Authors:Bossart-Whitaker, P, Carson, M, Babu, Y.S, Smith, C.D, Laver, W.G, Air, G.M.
Deposit date:1993-03-08
Release date:1994-04-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of influenza A N9 neuraminidase and its complex with the inhibitor 2-deoxy 2,3-dehydro-N-acetyl neuraminic acid.
J.Mol.Biol., 232, 1993
6IPU
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BU of 6ipu by Molmil
Human nucleosome core particle containing 145 bp of DNA
Descriptor: CHLORIDE ION, DNA (145-MER), Histone H2A type 1-B/E, ...
Authors:DeFalco, L, Davey, C.A.
Deposit date:2018-11-04
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019

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