PDB: 41522 resultsInfo pagesStatus searchChemie searchBIRD

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6DOT	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 40 s at 21 C Descriptor: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of uncleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', 5'-R(P*CP*G)-3' portion of uncleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-09 Release date: 2018-08-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.423 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
4UE9	Complex of D. melanogaster eIF4E with the 4E-binding protein 4E-T Descriptor: EUKARYOTIC TRANSLATION INITIATION FACTOR 4E, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TRANSPORTER Authors: Peter, D, Weichenrieder, O. Deposit date: 2014-12-16 Release date: 2015-02-25 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Molecular Architecture of 4E-BP Translational Inhibitors Bound to Eif4E. Mol.Cell, 57, 2015
6DPA	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 4 mM Mn2+ and 200 mM K+ for 40 s at 21 C Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-09 Release date: 2018-08-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.489 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
6DW1	Cryo-EM structure of the benzodiazepine-sensitive alpha1beta1gamma2S tri-heteromeric GABAA receptor in complex with GABA (ECD map) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1, ... Authors: Phulera, S, Zhu, H, Yu, J, Yoshioka, C, Gouaux, E. Deposit date: 2018-06-26 Release date: 2018-08-08 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM structure of the benzodiazepine-sensitive alpha 1 beta 1 gamma 2S tri-heteromeric GABAAreceptor in complex with GABA. Elife, 7, 2018
6DPL	Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 200 mM Rb+ for 720 s at 21 C Descriptor: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', 5'-R(P*CP*G)-3' portion of cleaved RNA (5'-R(*AP*CP*AP*UP*CP*G)-3'), ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-09 Release date: 2018-08-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
4UE0	Structure of the bovine atadenovirus type 4 fibre head protein Descriptor: CARBONATE ION, FIBER, THIOCYANATE ION Authors: Nguyen, T.H, van Raaij, M.J. Deposit date: 2014-12-14 Release date: 2015-06-03 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.17 Å) Cite: Crystal structure of the fibre head domain of bovine adenovirus 4, a ruminant atadenovirus. Virol. J., 12, 2015
4UDV	Cryo-EM structure of TMV at 3.35 A resolution Descriptor: 5'-D(*GP*AP*AP)-3', CAPSID PROTEIN Authors: Fromm, S.A, Bharat, T.A.M, Jakobi, A.J, Hagen, W.J.H, Sachse, C. Deposit date: 2014-12-11 Release date: 2014-12-31 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.35 Å) Cite: Seeing Tobacco Mosaic Virus Through Direct Electron Detectors. J.Struct.Biol., 189, 2015
2R7P	Crystal Structure of H225A NSP2 and AMPPNP complex Descriptor: Non-structural RNA-binding protein 35, PHOSPHATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER Authors: Kumar, M, Prasad, B.V.V. Deposit date: 2007-09-09 Release date: 2007-10-23 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystallographic and Biochemical Analysis of Rotavirus NSP2 with Nucleotides Reveals a Nucleoside Diphosphate Kinase-Like Activity J.Virol., 81, 2007
6DQP	Crystal structure of SsuE FMN reductase Delta118 mutant in apo form Descriptor: FMN reductase (NADPH), GLYCEROL Authors: McFarlane, J.S, Ellis, H.R, Lamb, A.L. Deposit date: 2018-06-11 Release date: 2019-01-09 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.546 Å) Cite: Not as easy as pi : An insertional residue does not explain the pi-helix gain-of-function in two-component FMN reductases. Protein Sci., 28, 2019
4UHN	Characterization of a Novel Transaminase from Pseudomonas sp. Strain AAC Descriptor: ACETIC ACID, GLYCEROL, MAGNESIUM ION, ... Authors: Wilding, M, Peat, T.S, Newman, J, Scott, C. Deposit date: 2015-03-25 Release date: 2016-04-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.21 Å) Cite: A Beta-Alanine Catabolism Pathway Containing a Highly Promiscuous Omega-Transaminase in the 12-Aminododecanate-Degrading Pseudomonas Sp. Strain Aac. Appl.Environ.Microbiol., 82, 2016
2R9K	Crystal Structure of Misteltoe Lectin I in Complex with Phloretamide Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(4-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-hydroxyphenyl)propanamide, ... Authors: Meyer, A, Rypniewski, W, Celewicz, L, Erdmann, V.A, Voelter, W, Betzel, C. Deposit date: 2007-09-13 Release date: 2007-10-30 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The mistletoe lectin I--phloretamide structure reveals a new function of plant lectins. Biochem.Biophys.Res.Commun., 364, 2007
2RA3	Human cationic trypsin complexed with bovine pancreatic trypsin inhibitor (BPTI) Descriptor: CALCIUM ION, Pancreatic trypsin inhibitor, SULFATE ION, ... Authors: Salameh, M.A, Soares, A.S, Radisky, E.S. Deposit date: 2007-09-14 Release date: 2007-12-11 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Structural Basis for Accelerated Cleavage of Bovine Pancreatic Trypsin Inhibitor (BPTI) by Human Mesotrypsin. J.Biol.Chem., 283, 2008
2RA4	Crystal Structure of Human Monocyte Chemoattractant Protein 4 (MCP-4/CCL13) Descriptor: SULFATE ION, Small-inducible cytokine A13, trifluoroacetic acid Authors: Lubkowski, J, Barinka, C. Deposit date: 2007-09-14 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structure of human monocyte chemoattractant protein 4 (MCP-4/CCL13). Acta Crystallogr.,Sect.D, 64, 2008
2RCV	Crystal structure of the Bacillus subtilis superoxide dismutase Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn] Authors: Liu, P, Ewis, H.E, Huang, Y.J, Lu, C.D, Tai, P.C, Weber, I.T. Deposit date: 2007-09-20 Release date: 2008-02-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure of Bacillus subtilis superoxide dismutase. Acta Crystallogr.,Sect.F, 63, 2007
6DJP	Integrin alpha-v beta-8 in complex with the Fabs 8B8 and 68 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 68 heavy chain Fab, ... Authors: Cormier, A, Campbell, M.G, Nishimura, S.L, Cheng, Y. Deposit date: 2018-05-25 Release date: 2018-07-25 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: Cryo-EM structure of the alpha v beta 8 integrin reveals a mechanism for stabilizing integrin extension. Nat. Struct. Mol. Biol., 25, 2018
4UMY	IDH1 R132H in complex with cpd 1 Descriptor: GLYCEROL, ISOCITRATE DEHYDROGENASE [NADP] CYTOPLASMIC, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... Authors: McLean, L, Zhang, Y, Mathieu, M. Deposit date: 2014-05-22 Release date: 2014-11-19 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.07 Å) Cite: Selective Inhibition of Mutant Isocitrate Dehydrogenase 1 (Idh1) Via Disruption of a Metal Binding Network by an Allosteric Small Molecule. J.Biol.Chem., 290, 2015
1WPO	HYDROLYTIC ENZYME HUMAN CYTOMEGALOVIRUS PROTEASE Descriptor: HUMAN CYTOMEGALOVIRUS PROTEASE, SULFATE ION Authors: Tong, L. Deposit date: 1996-07-23 Release date: 1997-10-15 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2 Å) Cite: A new serine-protease fold revealed by the crystal structure of human cytomegalovirus protease. Nature, 383, 1996
4UN2	Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin Descriptor: UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2 Authors: Michielssens, S, Peters, J.H, Ban, D, Pratihar, S, Seeliger, D, Sharma, M, Giller, K, Sabo, T.M, Becker, S, Lee, D, Griesinger, C, de Groot, B.L. Deposit date: 2014-05-23 Release date: 2014-08-27 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.51 Å) Cite: A Designed Conformational Shift to Control Protein Binding Specificity. Angew.Chem.Int.Ed.Engl., 53, 2014
4UNG	Human insulin B26Asn mutant crystal structure Descriptor: INSULIN A CHAIN, INSULIN B CHAIN, SULFATE ION Authors: Zakova, L, Klevtikova, E, Lepsik, M, Collinsova, M, Watson, C.J, Turkenburg, J.P, Jiracek, J, Brzozowski, A.M. Deposit date: 2014-05-28 Release date: 2014-10-15 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Human Insulin Analogues Modified at the B26 Site Reveal a Hormone Conformation that is Undetected in the Receptor Complex Acta Crystallogr.,Sect.D, 70, 2014
6DMV	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soaked for 40 s in 2 mM Mg2+ and 200 mM K+ at 21 C Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-05 Release date: 2018-08-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.52 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
5OS9	Structure of the B3 DNA-Binding Domain of NGA1 Descriptor: B3 domain-containing transcription factor NGA1 Authors: Sasnauskas, G, Manakova, E. Deposit date: 2017-08-17 Release date: 2018-09-05 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: DNA recognition by Arabidopsis transcription factors ABI3 and NGA1. FEBS J., 285, 2018
6DOA	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 480 s at 21 C Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-09 Release date: 2018-08-15 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.474 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
6DOI	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid (1.54 Angstrom wavelength): Soak in 0.5 mM EGTA and 200 mM K+ at 21 C Descriptor: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of intact RNA (5'-R(*AP*CP*AP*UP*CP*G)-3'), 5'-R(P*CP*G)-3' portion of intact RNA (5'-R(*AP*CP*AP*UP*CP*G)-3'), ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-09 Release date: 2018-08-22 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.948 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
6DOQ	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C (dataset 2) Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-09 Release date: 2018-08-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.422 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
6DP5	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 40 mM Mg2+ and 75 mM K+ for 40 s at 21 C Descriptor: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', 5'-R(P*CP*G)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', ... Authors: Samara, N.L, Yang, W. Deposit date: 2018-06-09 Release date: 2018-08-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.432 Å) Cite: Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018

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