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7DTE
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BU of 7dte by Molmil
SARS-CoV-2 RdRP catalytic complex with T33-1 RNA
Descriptor: Non-structural protein 7, Non-structural protein 8, RNA (33-MER), ...
Authors:Wang, Q, Gong, P.
Deposit date:2021-01-04
Release date:2021-10-20
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Remdesivir overcomes the S861 roadblock in SARS-CoV-2 polymerase elongation complex.
Cell Rep, 37, 2021
5I3P
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BU of 5i3p by Molmil
DENGUE SEROTYPE 3 RNA-DEPENDENT RNA POLYMERASE BOUND TO COMPOUND 27
Descriptor: 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-2,4-dimethoxy-N-[(3-methoxyphenyl)sulfonyl]benzamide, Genome polyprotein, ZINC ION
Authors:Noble, C.G.
Deposit date:2016-02-10
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling
Plos Pathog., 12, 2016
1YSV
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BU of 1ysv by Molmil
Solution structure of the central region of the human GluR-B R/G pre-mRNA
Descriptor: 27-MER
Authors:Stefl, R, Allain, F.H.
Deposit date:2005-02-09
Release date:2005-07-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel RNA pentaloop fold involved in targeting ADAR2.
Rna, 11, 2005
5I3Q
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BU of 5i3q by Molmil
DENGUE SEROTYPE 3 RNA-DEPENDENT RNA POLYMERASE BOUND TO COMPOUND 29
Descriptor: 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-4-methoxy-2-methyl-N-[(quinolin-8-yl)sulfonyl]benzamide, Genome polyprotein, ZINC ION
Authors:Noble, C.G.
Deposit date:2016-02-10
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling
Plos Pathog., 12, 2016
8PSN
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BU of 8psn by Molmil
Tilapia Lake Virus polymerase in vRNA initiation state (transcriptase conformation)
Descriptor: 5' vRNA end - vRNA loop (40-mer), DNA (5'-D(*(CTP))-3'), MAGNESIUM ION, ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PSO
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BU of 8pso by Molmil
Tilapia Lake Virus polymerase in vRNA initiation state (core only)
Descriptor: 5' vRNA end - vRNA loop (40-mer), DNA (5'-D(*(CTP))-3'), MAGNESIUM ION, ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PSS
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BU of 8pss by Molmil
Tilapia Lake Virus polymerase in cRNA pre-initiation state mode B (core-endo only)
Descriptor: 5' cRNA end - cRNA loop (40-mer), MAGNESIUM ION, Polymerase acidic protein (PA-like), ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PT2
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BU of 8pt2 by Molmil
Tilapia Lake Virus polymerase in vRNA pre-initiation state mode B (transcriptase conformation)
Descriptor: 5' vRNA end - vRNA loop (40-mer), Polymerase acidic protein (PA-like), Putative PB1, ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PT7
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BU of 8pt7 by Molmil
Tilapia Lake Virus polymerase in cRNA pre-initiation state mode A (core-endo only)
Descriptor: 5'/3' cRNA ends - cRNA loop (40-mer), MAGNESIUM ION, Polymerase acidic protein (PA-like), ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PTJ
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BU of 8ptj by Molmil
Tilapia Lake Virus polymerase in vRNA pre-initiation state mode B (close core | partial replicase conformation)
Descriptor: 3' vRNA end - vRNA loop (40-mer), Polymerase acidic protein (PA-like), Putative PB1, ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-14
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
7EJU
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BU of 7eju by Molmil
Junin virus(JUNV) RNA polymerase L complexed with Z protein
Descriptor: MAGNESIUM ION, RING finger protein Z, RNA-directed RNA polymerase L, ...
Authors:Chen, Y.
Deposit date:2021-04-02
Release date:2021-07-07
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for recognition and regulation of arenavirus polymerase L by Z protein.
Nat Commun, 12, 2021
8PSQ
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BU of 8psq by Molmil
Tilapia Lake Virus polymerase in cRNA pre-initiation state mode A (core only)
Descriptor: 5' cRNA end - cRNA loop (40-mer), MAGNESIUM ION, Polymerase acidic protein (PA-like), ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PSU
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BU of 8psu by Molmil
Tilapia Lake Virus polymerase in vRNA pre-initiation state mode A (core only)
Descriptor: 5' vRNA end - vRNA loop (40-mer), Polymerase acidic protein (PA-like), Putative PB1, ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PTH
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BU of 8pth by Molmil
Tilapia Lake Virus polymerase in vRNA pre-initiation state mode B (open core | partial replicase conformation)
Descriptor: 3' vRNA end - vRNA loop (40-mer), Polymerase acidic protein (PA-like), Putative PB1, ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-14
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PSX
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BU of 8psx by Molmil
Tilapia Lake Virus polymerase in vRNA elongation state (transcriptase conformation)
Descriptor: 5' vRNA end - vRNA loop (40-mer), MAGNESIUM ION, Polymerase acidic protein (PA-like), ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PT6
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BU of 8pt6 by Molmil
Tilapia Lake Virus polymerase in vRNA initiation state (replicase conformation)
Descriptor: 5' vRNA end - vRNA loop (40-mer), DNA (5'-D(*(CTP))-3'), MAGNESIUM ION, ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2023-12-27
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
8PSZ
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BU of 8psz by Molmil
Tilapia Lake Virus polymerase in vRNA elongation state with additional mode B promoter (transcriptase conformation)
Descriptor: 5' vRNA end - vRNA loop (40-mer), MAGNESIUM ION, Polymerase acidic protein (PA-like), ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-07-13
Release date:2024-01-10
Method:ELECTRON MICROSCOPY (2.42 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
3NYB
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BU of 3nyb by Molmil
Structure and function of the polymerase core of TRAMP, a RNA surveillance complex
Descriptor: Poly(A) RNA polymerase protein 2, Protein AIR2, ZINC ION
Authors:Reinisch, K.M, Hamill, S.
Deposit date:2010-07-14
Release date:2010-08-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7007 Å)
Cite:Structure and function of the polymerase core of TRAMP, a RNA surveillance complex.
Proc.Natl.Acad.Sci.USA, 107, 2010
2WK4
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BU of 2wk4 by Molmil
Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase
Descriptor: GLYCEROL, PROTEASE-POLYMERASE P70
Authors:Fullerton, S.W.B, Robel, I, Schuldt, L, Gebhardt, J, Tucker, P.A, Rohayem, J.
Deposit date:2009-06-05
Release date:2010-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Dimeric Structure of D347G D348G Mutant of the Sapporovirus Sapporovirus RNA Dependent RNA Polymerase
To be Published
2R7W
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BU of 2r7w by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/mRNA 5'-CAP (m7GpppG) complex
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-10
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
8QZ8
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BU of 8qz8 by Molmil
Tilapia Lake Virus polymerase in vRNA pre-termination state (transcriptase conformation)
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Polymerase acidic protein (PA-like), ...
Authors:Arragain, B, Cusack, S.
Deposit date:2023-10-26
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.
Nat Commun, 14, 2023
5U04
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BU of 5u04 by Molmil
Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase
Descriptor: PHOSPHATE ION, ZINC ION, Zika Virus NS5 RdRp
Authors:Godoy, A.S, Lima, G.M.A, Oliveira, K.I.Z, Torres, N.U, Maluf, F.V, Guido, R.V.C, Oliva, G.
Deposit date:2016-11-22
Release date:2017-02-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase.
Nat Commun, 8, 2017
5TRH
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BU of 5trh by Molmil
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 2-[(benzenecarbonyl)amino]-3-[(4-chlorophenyl)methoxy]benzoic acid
Descriptor: (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid, 2-[(benzenecarbonyl)amino]-3-[(4-chlorophenyl)methoxy]benzoic acid, NS5B RNA-DEPENDENT RNA POLYMERASE, ...
Authors:Sheriff, S.
Deposit date:2016-10-26
Release date:2016-11-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery and initial optimization of alkoxyanthranilic acid derivatives as inhibitors of HCV NS5B polymerase.
Bioorg. Med. Chem. Lett., 27, 2017
5TRI
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BU of 5tri by Molmil
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 3-[(4-chlorophenyl)methoxy]-2-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)benzoic acid
Descriptor: (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid, 3-[(4-chlorophenyl)methoxy]-2-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)benzoic acid, NS5B RNA-DEPENDENT RNA POLYMERASE, ...
Authors:Sheriff, S.
Deposit date:2016-10-26
Release date:2016-11-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery and initial optimization of alkoxyanthranilic acid derivatives as inhibitors of HCV NS5B polymerase.
Bioorg. Med. Chem. Lett., 27, 2017
4FLB
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BU of 4flb by Molmil
CID of human RPRD2
Descriptor: PRASEODYMIUM ION, Regulation of nuclear pre-mRNA domain-containing protein 2, SULFATE ION, ...
Authors:Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
Deposit date:2012-06-14
Release date:2012-08-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014

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