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3DMO
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BU of 3dmo by Molmil
1.6 A crystal structure of cytidine deaminase from Burkholderia pseudomallei
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Cytidine deaminase, PHOSPHATE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-07-01
Release date:2008-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:1.6 A crystal structure of cytidine deaminase from Burkholderia pseudomallei
To be Published
3DN7
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BU of 3dn7 by Molmil
Cyclic nucleotide binding regulatory protein from Cytophaga hutchinsonii.
Descriptor: 1,2-ETHANEDIOL, Cyclic nucleotide binding regulatory protein, GLYCEROL
Authors:Osipiuk, J, Maltseva, N, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-07-01
Release date:2008-08-26
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of cyclic nucleotide binding regulatory protein from Cytophaga hutchinsonii.
To be Published
3DP0
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BU of 3dp0 by Molmil
Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3m
Descriptor: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, BENZAMIDINE, CHLORIDE ION, ...
Authors:Zhang, L, He, L, Liu, X, Liu, H, Shen, X, Jiang, H.
Deposit date:2008-07-07
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovering potent inhibitors against the beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Helicobacter pylori: structure-based design, synthesis, bioassay, and crystal structure determination.
J.Med.Chem., 52, 2009
3DPI
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BU of 3dpi by Molmil
Crystal Structure of NAD+ synthetase from Burkholderia Pseudomallei
Descriptor: ACETATE ION, NAD+ synthetase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-07-08
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of NAD+ synthetase from Burkholderia Pseudomallei
To be Published
3DQ9
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BU of 3dq9 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 1: Structure 15 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQM
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BU of 3dqm by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 750 Atmospheres: Structure 4 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DP7
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BU of 3dp7 by Molmil
CRYSTAL STRUCTURE OF SAM-dependent methyltransferase from Bacteroides vulgatus ATCC 8482
Descriptor: SAM-dependent methyltransferase
Authors:Malashkevich, V.N, Toro, R, Ramagopal, U, Meyer, A.J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-07
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:CRYSTAL STRUCTURE OF SAM-dependent methyltransferase from Bacteroides vulgatus ATCC 8482
To be Published
3DPO
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BU of 3dpo by Molmil
Crystal structure of the substrate binding domain of E. coli DnaK in complex with a short pyrrhocoricin-derived inhibitor peptide
Descriptor: Chaperone protein dnaK, SULFATE ION, inhibitor peptide
Authors:Roujeinikova, A.
Deposit date:2008-07-09
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Allosteric coupling between the lid and interdomain linker in DnaK revealed by inhibitor binding studies
J.Bacteriol., 191, 2009
3DQ2
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BU of 3dq2 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 1: Structure 23 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQC
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BU of 3dqc by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 3: Structure 13 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DUR
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BU of 3dur by Molmil
Crystal structure of SAG173-04
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ...
Authors:Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V.
Deposit date:2008-07-17
Release date:2008-12-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments.
Acta Crystallogr.,Sect.D, 64, 2008
3DV2
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BU of 3dv2 by Molmil
Crystal Structure of nicotinic acid mononucleotide adenylyltransferase from Bacillus anthracis
Descriptor: Nicotinate (Nicotinamide) nucleotide adenylyltransferase, SULFATE ION
Authors:Lu, S, Smith, C.D, Yang, Z, Pruett, P.S, Nagy, L, McCombs, D.P, DeLucas, L.J, Brouillette, W.J, Brouillette, C.G.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of nicotinic acid mononucleotide adenylyltransferase from Bacillus anthracis.
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
3DWR
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BU of 3dwr by Molmil
Leishmania major coproporphyrinogen III oxidase with bound ligand
Descriptor: ACETATE ION, Coproporphyrinogen III oxidase, cyclopentylacetic acid
Authors:Le Trong, I, Merritt, E.A, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2008-07-22
Release date:2008-09-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Leishmania major coproporphyrinogen III oxidase with bound ligand
To be Published
3DX2
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BU of 3dx2 by Molmil
Golgi mannosidase II complex with MANNOSTATIN B
Descriptor: (1R,2R,3R,4S,5R)-4-amino-5-[(R)-methylsulfinyl]cyclopentane-1,2,3-triol, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Kuntz, D.A, Zhong, W, Guo, J, Rose, D.R, Boons, G.-J.
Deposit date:2008-07-23
Release date:2009-07-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The molecular basis of inhibition of Golgi alpha-mannosidase II by mannostatin A.
Chembiochem, 10, 2009
3DZ7
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BU of 3dz7 by Molmil
Human AdoMetDC with 5'-[(carboxamidomethyl)methylamino]-5'-deoxy-8-methyladenosine
Descriptor: 1,4-DIAMINOBUTANE, 2-[{[(2R,3S,4R,5R)-5-(6-amino-8-methyl-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(methyl)amino]acetamide, S-adenosylmethionine decarboxylase alpha chain, ...
Authors:Bale, S, McCloskey, D.E, Pegg, A.E, Secrist III, J.A, Guida, W.C, Ealick, S.E.
Deposit date:2008-07-29
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:New Insights into the Design of Inhibitors of Human S-Adenosylmethionine Decarboxylase: Studies of Adenine C8 Substitution in Structural Analogues of S-Adenosylmethionine
J.Med.Chem., 52, 2009
3DZN
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BU of 3dzn by Molmil
Thaumatin by LB nanotemplate method before high X-Ray dose on ESRF ID29 beamline
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2008-07-30
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3E0Q
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BU of 3e0q by Molmil
Crystal structure of Schistosoma mansoni purine nucleoside phosphorylase complexed with a novel monocyclic inhibitor
Descriptor: 6-amino-5-bromo-1,2,3,4-tetrahydropyrimidine-2,4-dione, DIMETHYL SULFOXIDE, Purine-nucleoside phosphorylase
Authors:Pereira, H.M, Berdini, V, Ferri, M.R, Cleasby, A, Garratt, R.C.
Deposit date:2008-07-31
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Schistosoma purine nucleoside phosphorylase complexed with a novel monocyclic inhibitor.
Acta Trop., 114, 2010
3DJJ
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BU of 3djj by Molmil
Catalytic cycle of human glutathione reductase near 1 A resolution
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Glutathione reductase, ...
Authors:Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A.
Deposit date:2008-06-23
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Catalytic cycle of human glutathione reductase near 1 A resolution.
J.Mol.Biol., 382, 2008
3DZD
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BU of 3dzd by Molmil
Crystal structure of sigma54 activator NTRC4 in the inactive state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Transcriptional regulator (NtrC family)
Authors:Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E.
Deposit date:2008-07-29
Release date:2008-11-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
3DK4
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BU of 3dk4 by Molmil
Catalytic cycle of human glutathione reductase near 1 A resolution
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, Glutathione reductase, ...
Authors:Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A.
Deposit date:2008-06-24
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Catalytic cycle of human glutathione reductase near 1 A resolution.
J.Mol.Biol., 382, 2008
3DZU
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BU of 3dzu by Molmil
Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with BVT.13, 9-cis Retinoic Acid and NCOA2 Peptide
Descriptor: (9cis)-retinoic acid, 2-[(2,4-DICHLOROBENZOYL)AMINO]-5-(PYRIMIDIN-2-YLOXY)BENZOIC ACID, DNA (5'-D(*DCP*DAP*DAP*DAP*DCP*DTP*DAP*DGP*DGP*DTP*DCP*DAP*DAP*DAP*DGP*DGP*DTP*DCP*DAP*DG)-3'), ...
Authors:Chandra, V, Huang, P, Hamuro, Y, Raghuram, S, Wang, Y, Burris, T.P, Rastinejad, F.
Deposit date:2008-07-30
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the intact PPAR-gamma-RXR- nuclear receptor complex on DNA.
Nature, 456, 2008
3DKR
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BU of 3dkr by Molmil
Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
Descriptor: ACETATE ION, Esterase D
Authors:Bennett, M.D, Delabre, M.-L, Holland, R, Norris, G.E.
Deposit date:2008-06-25
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of esterase D from lactobacillus rhamnosus
To be Published
3E0A
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BU of 3e0a by Molmil
Thaumatin by Classical hanging drop method after high X-Ray dose on ESRF ID29 beamline
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2008-07-31
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DNC
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BU of 3dnc by Molmil
Carboxysome shell protein, CcmK2 C-terminal deletion mutant, with a closer spacing between hexamers
Descriptor: Carbon dioxide-concentrating mechanism protein ccmK homolog 2, GLYCEROL, SULFATE ION
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2008-07-01
Release date:2009-01-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Insights from multiple structures of the shell proteins from the beta-carboxysome.
Protein Sci., 18, 2009
3DOC
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BU of 3doc by Molmil
Crystal Structure of TrkA glyceraldehyde-3-phosphate dehydrogenase from Brucella melitensis
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, glyceraldehyde 3-phosphate dehydrogenase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-07-03
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of TrkA glyceraldehyde-3-phosphate dehydrogenase from Brucella melitensis
To be Published

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