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5TI8
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BU of 5ti8 by Molmil
Crystal Structure of an aspartate aminotransferase from Pseudomonas
Descriptor: Aminotransferase, CALCIUM ION
Authors:Peat, T.S, Newman, J.
Deposit date:2016-10-01
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of a putrescine aminotransferase from Pseudomonas sp. strain AAC.
Acta Crystallogr F Struct Biol Commun, 73, 2017
3ONB
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BU of 3onb by Molmil
Bond breakage and relocation of a covalently bound bromine of IDD594 in a complex with hAR T113A mutant after extensive radiation dose
Descriptor: Aldose reductase, BROMIDE ION, CITRIC ACID, ...
Authors:Koch, C, Heine, A, Klebe, G.
Deposit date:2010-08-28
Release date:2011-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Radiation damage reveals promising interaction position
J.SYNCHROTRON RADIAT., 18, 2011
5TM0
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BU of 5tm0 by Molmil
Solution NMR structures of two alternative conformations of E. coli tryptophan repressor in dynamic equilibrium
Descriptor: Trp operon repressor
Authors:Harish, B, Swapna, G.V.T, Kornhaber, G.J, Montelione, G.T, Carey, J, Northeast Structural Genomics Consortium (NESG)
Deposit date:2016-10-12
Release date:2017-10-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Multiple helical conformations of the helix-turn-helix region revealed by NOE-restrained MD simulations of tryptophan aporepressor, TrpR.
Proteins, 85, 2017
3LZW
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BU of 3lzw by Molmil
Crystal structure of ferredoxin-NADP+ oxidoreductase from bacillus subtilis (form I)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase 2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Komori, H, Seo, D, Sakurai, T, Higuchi, Y.
Deposit date:2010-03-02
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of Bacillus subtilis ferredoxin-NADP(+) oxidoreductase and the structural basis for its substrate selectivity
Protein Sci., 19, 2010
1H31
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BU of 1h31 by Molmil
Oxidised SoxAX complex from Rhodovulum sulfidophilum
Descriptor: CYTOCHROME C, DIHEME CYTOCHROME C, HEME C
Authors:Bamford, V.A, Bruno, S, Rasmussen, T, Appia-Ayme, C, Cheesman, M.R, Berks, B.C, Hemmings, A.M.
Deposit date:2002-08-21
Release date:2002-11-07
Last modified:2013-03-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Basis for the Oxidation of Thiosulfate by a Sulfur Cycle Enzyme
Embo J., 21, 2002
1H33
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BU of 1h33 by Molmil
Oxidised SoxAX complex from Rhodovulum sulfidophilum
Descriptor: CYTOCHROME C, DIHEME CYTOCHROME C, HEME C
Authors:Bamford, V.A, Bruno, S, Rasmussen, T, Appia-Ayme, C, Cheesman, M.R, Berks, B.C, Hemmings, A.M.
Deposit date:2002-08-21
Release date:2002-11-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for the Oxidation of Thiosulfate by a Sulfur Cycle Enzyme
Embo J., 21, 2002
1UPN
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BU of 1upn by Molmil
COMPLEX OF ECHOVIRUS TYPE 12 WITH DOMAINS 3 AND 4 OF ITS RECEPTOR DECAY ACCELERATING FACTOR (CD55) BY CRYO ELECTRON MICROSCOPY AT 16 A
Descriptor: COMPLEMENT DECAY-ACCELERATING FACTOR, ECHOVIRUS 11 COAT PROTEIN VP1, ECHOVIRUS 11 COAT PROTEIN VP2, ...
Authors:Bhella, D, Goodfellow, I.G, Roversi, P, Pettigrew, D, Chaudry, Y, Evans, D.J, Lea, S.M.
Deposit date:2003-10-08
Release date:2004-01-07
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (16 Å)
Cite:The Structure of Echovirus Type 12 Bound to a Two-Domain Fragment of its Cellular Attachment Protein Decay-Accelerating Factor (Cd 55)
J.Biol.Chem., 279, 2004
1H32
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BU of 1h32 by Molmil
Reduced SoxAX complex from Rhodovulum sulfidophilum
Descriptor: 1,2-ETHANEDIOL, CYTOCHROME C, DIHEME CYTOCHROME C, ...
Authors:Bamford, V.A, Bruno, S, Rasmussen, T, Appia-Ayme, C, Cheesman, M.R, Berks, B.C, Hemmings, A.M.
Deposit date:2002-08-21
Release date:2002-11-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis for the Oxidation of Thiosulfate by a Sulfur Cycle Enzyme
Embo J., 21, 2002
1ZM8
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BU of 1zm8 by Molmil
Apo Crystal structure of Nuclease A from Anabaena sp.
Descriptor: MANGANESE (II) ION, Nuclease, SODIUM ION, ...
Authors:Ghosh, M, Meiss, G, Pingoud, A, London, R.E, Pedersen, L.C.
Deposit date:2005-05-10
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into the Mechanism of Nuclease A, a beta beta alpha Metal Nuclease from Anabaena.
J.Biol.Chem., 280, 2005
3ONC
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BU of 3onc by Molmil
Bond breakage and relocation of a covalently bound bromine of IDD594 in a complex with hAR T113A mutant after moderate radiation dose
Descriptor: Aldose reductase, BROMIDE ION, CITRIC ACID, ...
Authors:Koch, C, Heine, A, Klebe, G.
Deposit date:2010-08-28
Release date:2011-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Radiation damage reveals promising interaction position
J.SYNCHROTRON RADIAT., 18, 2011
2NM2
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BU of 2nm2 by Molmil
Crystal structure of dihydroneopterin aldolase from S. aureus in complex with (1S,2R)-neopterin at 1.50 Angstrom resolution
Descriptor: Dihydroneopterin aldolase, L-NEOPTERIN
Authors:Blaszczyk, J, Ji, X, Yan, H.
Deposit date:2006-10-20
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the aldolase and epimerase activities of Staphylococcus aureus dihydroneopterin aldolase.
J.Mol.Biol., 368, 2007
2NM3
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BU of 2nm3 by Molmil
Crystal structure of dihydroneopterin aldolase from S. aureus in complex with (1S,2S)-monapterin at 1.68 angstrom resolution
Descriptor: ACETATE ION, D-MONAPTERIN, Dihydroneopterin aldolase
Authors:Blaszczyk, J, Ji, X, Yan, H.
Deposit date:2006-10-20
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis for the aldolase and epimerase activities of Staphylococcus aureus dihydroneopterin aldolase.
J.Mol.Biol., 368, 2007
2IHN
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BU of 2ihn by Molmil
Co-crystal of Bacteriophage T4 RNase H with a fork DNA substrate
Descriptor: 5'-D(*CP*TP*AP*AP*CP*TP*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*CP*C)-3', 5'-D(*GP*GP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*TP*AP*GP*TP*CP*AP*A)-3', Ribonuclease H
Authors:Devos, J.M, Mueser, T.C.
Deposit date:2006-09-26
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of bacteriophage T4 5' nuclease in complex with a branched DNA reveals how FEN-1 family nucleases bind their substrates.
J.Biol.Chem., 282, 2007
7EL3
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BU of 7el3 by Molmil
Crystal structure of HpaR-DNA complex from Acinetobacter baumannii
Descriptor: Chains: C, Chains: D, GLYCEROL, ...
Authors:Permsirivisarn, P, Pakotiprapha, D.
Deposit date:2021-04-07
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of transcription regulation by Acinetobacter baumannii HpaR in the catabolism of p-hydroxyphenylacetate.
Febs J., 289, 2022
5TMC
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BU of 5tmc by Molmil
Re-refinement of Thermus thermopiles DNA-directed RNA polymerase structure
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Wang, J.
Deposit date:2016-10-12
Release date:2016-11-23
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:On the validation of crystallographic symmetry and the quality of structures.
Protein Sci., 24, 2015
2IN2
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BU of 2in2 by Molmil
NMR Structure of the Apo Human Rhinovirus 3C Protease (serotype 14)
Descriptor: Picornain 3C
Authors:Bjorndahl, T.C, Semenchenko, V, Wishart, D.S.
Deposit date:2006-10-05
Release date:2006-10-24
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NMR solution structures of the apo and peptide-inhibited human rhinovirus 3C protease (Serotype 14): structural and dynamic comparison.
Biochemistry, 46, 2007
2JYM
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BU of 2jym by Molmil
Solution structure of stem-loop alpha of the hepatitis B virus post-transcriptional regulatory element
Descriptor: RNA (5'-R(*GP*GP*CP*UP*CP*GP*CP*AP*GP*CP*AP*GP*GP*UP*CP*UP*GP*GP*AP*GP*UP*C)-3')
Authors:Ohlenschlager, O, Gorlach, M, Schwalbe, M.
Deposit date:2007-12-14
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of stem-loop alpha of the hepatitis B virus post-transcriptional regulatory element
Nucleic Acids Res., 36, 2008
2K1E
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BU of 2k1e by Molmil
NMR studies of a channel protein without membranes: structure and dynamics of water-solubilized KcsA
Descriptor: water soluble analogue of potassium channel, KcsA
Authors:Ma, D, Xu, Y, Tillman, T, Tang, P, Meirovitch, E, Eckenhoff, R, Carnini, A.
Deposit date:2008-02-29
Release date:2008-11-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR studies of a channel protein without membranes: structure and dynamics of water-solubilized KcsA.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2M5E
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BU of 2m5e by Molmil
Structure of the C-domain of Calcium-saturated Calmodulin bound to the IQ motif of NaV1.2
Descriptor: CALCIUM ION, Calmodulin, Sodium channel protein type 2 subunit alpha
Authors:Fowler, C.A, Feldkamp, M.D, Yu, L, Shea, M.A.
Deposit date:2013-02-21
Release date:2014-07-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Calcium triggers reversal of calmodulin on nested anti-parallel sites in the IQ motif of the neuronal voltage-dependent sodium channel NaV1.2.
Biophys. Chem., 224, 2017
3LQS
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BU of 3lqs by Molmil
Complex Structure of D-Amino Acid Aminotransferase and 4-amino-4,5-dihydro-thiophenecarboxylic acid (ADTA)
Descriptor: 4-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]THIOPHENE-2-CARBOXYLIC ACID, ACETIC ACID, D-alanine aminotransferase
Authors:Lepore, B.W, Liu, D, Peng, Y, Fu, M, Yasuda, C, Manning, J.M, Silverman, R.B, Ringe, D.
Deposit date:2010-02-10
Release date:2010-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chiral discrimination among aminotransferases: inactivation by 4-amino-4,5-dihydrothiophenecarboxylic acid.
Biochemistry, 49, 2010
2M3L
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BU of 2m3l by Molmil
Solution structure of the C-terminal zinc-binding domain of HPV51 oncoprotein E6
Descriptor: Protein E6, ZINC ION
Authors:Mischo, A, Ohlenschlager, O, Gorlach, M.
Deposit date:2013-01-21
Release date:2013-05-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insights into a wildtype domain of the oncoprotein E6 and its interaction with a PDZ domain.
Plos One, 8, 2013
2MJX
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BU of 2mjx by Molmil
Solution NMR structure of a mismatch DNA
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*AP*CP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*CP*G)-3')
Authors:Ghosh, A, Kumar, K.R, Bhunia, A, Chatterjee, S.
Deposit date:2014-01-21
Release date:2014-03-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Double GC:GC mismatch in dsDNA enhances local dynamics retaining the DNA footprint: a high-resolution NMR study
Chemmedchem, 9, 2014
2M3M
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BU of 2m3m by Molmil
Solution structure of a complex consisting of hDlg/SAP-97 residues 318-406 and HPV51 oncoprotein E6 residues 141-151
Descriptor: Disks large homolog 1, Protein E6
Authors:Mischo, A, Ohlenschlager, O, Gorlach, M.
Deposit date:2013-01-22
Release date:2013-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural insights into a wildtype domain of the oncoprotein E6 and its interaction with a PDZ domain.
Plos One, 8, 2013
7L7G
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BU of 7l7g by Molmil
Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens (updated model of PDB ID: 6CAJ)
Descriptor: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
Authors:Tsai, J.C, Miller-Vedam, L.E, Anand, A, Jaishankar, P, Nguyen, H.C, Wang, L, Renslo, A.R, Frost, A, Walter, P.
Deposit date:2020-12-28
Release date:2021-03-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3 Å)
Cite:eIF2B conformation and assembly state regulates the integrated stress response.
Elife, 10, 2021
2HZP
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BU of 2hzp by Molmil
Crystal Structure of Homo Sapiens Kynureninase
Descriptor: Kynureninase, PYRIDOXAL-5'-PHOSPHATE
Authors:Lima, S, Khristoforov, R, Momany, C, Phillips, R.S.
Deposit date:2006-08-09
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Homo sapiens Kynureninase.
Biochemistry, 46, 2007

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