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2AB5
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BU of 2ab5 by Molmil
bI3 LAGLIDADG Maturase
Descriptor: SULFATE ION, mRNA maturase
Authors:Longo, A, Leonard, C.W, Bassi, G.S, Berndt, D, Krahn, J.M, Hall, T.M, Weeks, K.M.
Deposit date:2005-07-14
Release date:2005-08-30
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Evolution from DNA to RNA recognition by the bI3 LAGLIDADG maturase
Nat.Struct.Mol.Biol., 12, 2005
3OXG
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BU of 3oxg by Molmil
human lysine methyltransferase Smyd3 in complex with AdoHcy (Form III)
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SET and MYND domain-containing protein 3, ZINC ION
Authors:Xu, S, Wu, J, Sun, B, Zhong, C, Ding, J.
Deposit date:2010-09-21
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Structural and biochemical studies of human lysine methyltransferase Smyd3 reveal the important functional roles of its post-SET and TPR domains and the regulation of its activity by DNA binding.
Nucleic Acids Res., 39, 2011
3OXF
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BU of 3oxf by Molmil
Human lysine methyltransferase Smyd3 in complex with AdoHcy (Form I)
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SET and MYND domain-containing protein 3, ZINC ION
Authors:Xu, S, Wu, J, Sun, B, Zhong, C, Ding, J.
Deposit date:2010-09-21
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structural and biochemical studies of human lysine methyltransferase Smyd3 reveal the important functional roles of its post-SET and TPR domains and the regulation of its activity by DNA binding.
Nucleic Acids Res., 39, 2011
4K6B
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BU of 4k6b by Molmil
Atomic structure of bacteriophage HS1 tail needle knob
Descriptor: GLUTAMIC ACID, HS1 knob domain, PHOSPHATE ION
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2013-04-15
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.101 Å)
Cite:The tip of the tail needle affects the rate of DNA delivery by bacteriophage p22.
Plos One, 8, 2013
9IOZ
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BU of 9ioz by Molmil
Structure of the bacteriophage T5 tail tip complex
Descriptor: Baseplate hub protein pb3, Baseplate tube protein p140, Distal tail protein pb9
Authors:Peng, Y.N, Liu, H.R.
Deposit date:2024-07-10
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of Mature and Urea-Treated Empty Bacteriophage T5: Insights into Siphophage Infection and DNA Ejection.
Int J Mol Sci, 25, 2024
9INY
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BU of 9iny by Molmil
Structure of bacteriophage T5 tail tube
Descriptor: Tail tube protein pb6
Authors:Peng, Y.N, Liu, H.R.
Deposit date:2024-07-08
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of Mature and Urea-Treated Empty Bacteriophage T5: Insights into Siphophage Infection and DNA Ejection.
Int J Mol Sci, 25, 2024
7AKO
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BU of 7ako by Molmil
Crystal structure of CHK1 kinase domain in complex with a CLASPIN phosphopeptide
Descriptor: 1,2-ETHANEDIOL, Claspin, STAUROSPORINE, ...
Authors:Day, M, Oliver, A.W, Pearl, L.H.
Deposit date:2020-10-01
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for recruitment of the CHK1 DNA damage kinase by the CLASPIN scaffold protein.
Structure, 29, 2021
7AKM
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BU of 7akm by Molmil
Crystal structure of CHK1 kinase domain in complex with ATPyS
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, MAGNESIUM ION, ...
Authors:Day, M, Oliver, A.W, Pearl, L.H.
Deposit date:2020-10-01
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural basis for recruitment of the CHK1 DNA damage kinase by the CLASPIN scaffold protein.
Structure, 29, 2021
2LVS
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BU of 2lvs by Molmil
NMR solution structure of a CRISPR repeat binding protein
Descriptor: Putative uncharacterized protein
Authors:Kenchappa, C.S, Heidarsson, P.O, Garrett, R.A, Poulsen, F.M.
Deposit date:2012-07-11
Release date:2013-01-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution properties of the archaeal CRISPR DNA repeat-binding homeodomain protein Cbp2.
Nucleic Acids Res., 41, 2013
9ILV
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BU of 9ilv by Molmil
Structure of the bacteriophage T5 connector complex
Descriptor: Tail tube terminator protein p142
Authors:Peng, Y.N, Liu, H.R.
Deposit date:2024-07-01
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structures of Mature and Urea-Treated Empty Bacteriophage T5: Insights into Siphophage Infection and DNA Ejection.
Int J Mol Sci, 25, 2024
2BRF
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BU of 2brf by Molmil
Crystal Structure of the FHA Domain of Human Polynucleotide Kinase 3' Phosphatase
Descriptor: BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE, SULFATE ION
Authors:Oliver, A.W, Ali, A.A.E, Pearl, L.H.
Deposit date:2005-05-04
Release date:2005-05-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Specific Recognition of a Multiply Phosphorylated Motif in the DNA Repair Scaffold Xrcc1 by the Fha Domain of Human Pnk.
Nucleic Acids Res., 37, 2009
7LWR
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BU of 7lwr by Molmil
Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging
Descriptor: Terminase, small subunit
Authors:Ortega, M.E.
Deposit date:2021-03-01
Release date:2022-03-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging
To Be Published
7LXS
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BU of 7lxs by Molmil
Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging
Descriptor: Terminase, small subunit
Authors:Ortega, M.E.
Deposit date:2021-03-04
Release date:2022-03-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging
To Be Published
7JTA
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BU of 7jta by Molmil
Crystal structure of a putative nuclease with anti-Cas9 activity from an uncultured Clostridia bacterium
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, NITRATE ION, NTF2-like nuclease/anti-CRISPR
Authors:Werther, R, Forsberg, K.J, Stoddard, B.L.
Deposit date:2020-08-17
Release date:2021-09-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The novel anti-CRISPR AcrIIA22 relieves DNA torsion in target plasmids and impairs SpyCas9 activity.
Plos Biol., 19, 2021
2HK4
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BU of 2hk4 by Molmil
Dimeric solution structure of the cyclic octamer d(CCGTCCGT)
Descriptor: 5'-D(P*CP*CP*GP*TP*CP*CP*GP*T)-3'
Authors:Escaja, N, Gomez-Pinto, I, Pedroso, E, Gonzalez, C.
Deposit date:2006-07-03
Release date:2007-03-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Four-stranded DNA structures can be stabilized by two different types of minor groove G:C:G:C tetrads.
J.Am.Chem.Soc., 129, 2007
6GHF
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BU of 6ghf by Molmil
Crystal structure of a GST variant
Descriptor: PvGmGSTUG
Authors:Papageorgiou, A.C, Chronopoulou, E.G, Labrou, N.E.
Deposit date:2018-05-07
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Expanding the Plant GSTome Through Directed Evolution: DNA Shuffling for the Generation of New Synthetic Enzymes With Engineered Catalytic and Binding Properties.
Front Plant Sci, 9, 2018
2B2B
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BU of 2b2b by Molmil
Structural distortions in psoralen cross-linked DNA
Descriptor: 4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN, 5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3', CALCIUM ION, ...
Authors:Hays, F.A, Yonggang, H, Eichman, B.F, Kong, W, Hearst, J, Ho, P.S.
Deposit date:2005-09-19
Release date:2006-10-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural distortions in psoralen cross-linked DNA
To be Published
3FT6
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BU of 3ft6 by Molmil
Crystal Structure of Proflavine in Complex with a DNA hexamer duplex
Descriptor: 5'-D(*CP*GP*AP*TP*CP*G)-3', COBALT HEXAMMINE(III), PROFLAVIN
Authors:Maehigashi, T, Persil, O, Hud, N.V, Williams, L.D.
Deposit date:2009-01-12
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Crystal Structure of Proflavine in Complex with a DNA hexamer duplex
To be Published
5ZWZ
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BU of 5zwz by Molmil
Crystal structure of Arabidopsis thaliana AGDP1 AGD34
Descriptor: Agenet domain-containing protein
Authors:Du, X, Du, J.
Deposit date:2018-05-17
Release date:2018-11-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin
Nat Commun, 9, 2018
5ZWX
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BU of 5zwx by Molmil
Crystal structure of Raphanus sativus AGDP1 AGD12 in complex with an H3K9me2 peptide
Descriptor: DUF724 domain-containing protein 6-like, H3(1-15)K9me2 peptide
Authors:Du, X, Du, J.
Deposit date:2018-05-17
Release date:2018-11-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin
Nat Commun, 9, 2018
3CE5
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BU of 3ce5 by Molmil
A bimolecular parallel-stranded human telomeric quadruplex in complex with a 3,6,9-trisubstituted acridine molecule BRACO19
Descriptor: 9-[4-(n,n-dimethylamino)phenylamino]-3,6-bis(3-pyrrolidinopropionamido) acridine, DNA (5'-D(*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3'), POTASSIUM ION
Authors:Campbell, N.H, Parkinson, G.N, Reszka, A.P, Neidle, S.
Deposit date:2008-02-28
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of DNA quadruplex recognition by an acridine drug.
J.Am.Chem.Soc., 130, 2008
3GJH
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BU of 3gjh by Molmil
Crystal structure of a DNA duplex containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-one
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(B7C)P*GP*CP*G)-3', 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE
Authors:Takenaka, A, Juan, E.C.M, Shimizu, S, Haraguchi, T, Xiao, M, Kurose, T.
Deposit date:2009-03-09
Release date:2010-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insights into the stabilizing contributions of bicyclic cytosine analogues: crystal structures of DNA duplexes containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-one
To be Published
3L6T
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BU of 3l6t by Molmil
Crystal Structure of an N-terminal Mutant of the Plasmid pCU1 TraI Relaxase Domain
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CITRIC ACID, ...
Authors:Redinbo, M.R, Nash, R.P.
Deposit date:2009-12-24
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The mechanism and control of DNA transfer by the conjugative relaxase of resistance plasmid pCU1.
Nucleic Acids Res., 38, 2010
3LX6
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BU of 3lx6 by Molmil
Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
Descriptor: Cytosine-specific methyltransferase
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-02-24
Release date:2010-03-23
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published
3ME5
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BU of 3me5 by Molmil
Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
Descriptor: Cytosine-specific methyltransferase
Authors:Ramagopal, U.A, Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-03-31
Release date:2010-04-21
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published

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