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3FFU
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BU of 3ffu by Molmil
Structure of the RNA pyrophosphohydrolase BdRppH in complex with GTP and magnesium
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable pyrophosphohydrolase
Authors:Messing, S.A, Gabelli, S.B, Amzel, L.M.
Deposit date:2008-12-04
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and Biological Function of the RNA Pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus.
Structure, 17, 2009
4BFA
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BU of 4bfa by Molmil
Crystal structure of E. coli dihydrouridine synthase C (DusC)
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, NITRATE ION, ...
Authors:Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A.
Deposit date:2013-03-16
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
3LVJ
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BU of 3lvj by Molmil
Crystal Structure of E.coli IscS-TusA complex (form 1)
Descriptor: Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE, Sulfurtransferase tusA
Authors:Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-02-22
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.435 Å)
Cite:Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010
2D17
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BU of 2d17 by Molmil
Solution RNA structure of stem-bulge-stem region of the HIV-1 dimerization initiation site
Descriptor: 5'-R(*CP*GP*GP*CP*AP*AP*GP*AP*GP*GP*CP*GP*AP*CP*CP*C)-3', 5'-R(*GP*GP*GP*UP*CP*GP*GP*CP*UP*UP*GP*CP*UP*G)-3'
Authors:Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D18
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BU of 2d18 by Molmil
Solution RNA structure of loop region of the HIV-1 dimerization initiation site in the extended-duplex dimer
Descriptor: 5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3'
Authors:Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2LRS
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BU of 2lrs by Molmil
The second dsRBD domain from A. thaliana DICER-LIKE 1
Descriptor: Endoribonuclease Dicer homolog 1
Authors:Burdisso, P, Suarez, I, Bersch, B, Bologna, N, Palatnik, J, Boisbouvier, J, Rasia, R.
Deposit date:2012-04-12
Release date:2013-01-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Second Double-Stranded RNA Binding Domain of Dicer-like Ribonuclease 1: Structural and Biochemical Characterization.
Biochemistry, 51, 2012
3EPP
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BU of 3epp by Molmil
Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin
Descriptor: SINEFUNGIN, mRNA cap guanine-N7 methyltransferase
Authors:Amaya, M.F, Zeng, H, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Min, J, Plotnikov, A.N, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2008-09-29
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin.
To be Published
3J22
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BU of 3j22 by Molmil
The Enterovirus 71 A-particle
Descriptor: capsid protein VP0, capsid protein VP1, capsid protein VP3
Authors:Shingler, K.L.
Deposit date:2012-08-13
Release date:2013-04-03
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:The Enterovirus 71 A-particle Forms a Gateway to Allow Genome Release: A CryoEM Study of Picornavirus Uncoating.
Plos Pathog., 9, 2013
6G04
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BU of 6g04 by Molmil
NMR Solution Structure of Yeast TSR2(1-152) in Complex with S26A(100-119)
Descriptor: 40S ribosomal protein S26-A, Pre-rRNA-processing protein TSR2
Authors:Michel, E, Schuetz, S, Damberger, F.F, Allain, F.H.-T, Panse, V.G.
Deposit date:2018-03-16
Release date:2018-09-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular basis for disassembly of an importin:ribosomal protein complex by the escortin Tsr2.
Nat Commun, 9, 2018
3J23
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BU of 3j23 by Molmil
The Enterovirus 71 empty capsid
Descriptor: capsid protein VP0, capsid protein VP1, capsid protein VP3
Authors:Shingler, K.L.
Deposit date:2012-08-13
Release date:2013-04-03
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.2 Å)
Cite:The Enterovirus 71 A-particle Forms a Gateway to Allow Genome Release: A CryoEM Study of Picornavirus Uncoating.
Plos Pathog., 9, 2013
6VWT
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BU of 6vwt by Molmil
Transitional unit cell 1 of adenine riboswitch aptamer crystal phase transition upon ligand binding
Descriptor: ADENINE, MAGNESIUM ION, adenine riboswitch aptamer variant
Authors:Stagno, J.R, Wang, Y.-X.
Deposit date:2020-02-20
Release date:2020-11-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Synchronous RNA conformational changes trigger ordered phase transitions in crystals.
Nat Commun, 12, 2021
1MI6
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BU of 1mi6 by Molmil
Docking of the modified RF2 X-ray structure into the Low Resolution Cryo-EM map of RF2 E.coli 70S Ribosome
Descriptor: peptide chain release factor RF-2
Authors:Rawat, U.B.S, Zavialov, A.V, Sengupta, J, Valle, M, Grassucci, R.A, Linde, J, Vestergaard, B, Ehrenberg, M, Frank, J.
Deposit date:2002-08-22
Release date:2003-01-14
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12.8 Å)
Cite:A cryo-electron microscopic study of ribosome-bound termination factor RF2
Nature, 421, 2003
2DGO
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BU of 2dgo by Molmil
Solution structure of the RNA binding domain in cytotoxic granule-associated RNA binding protein 1
Descriptor: Cytotoxic granule-associated RNA binding protein 1
Authors:Abe, C, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-15
Release date:2006-09-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in cytotoxic granule-associated RNA binding protein 1
To be Published
7APN
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BU of 7apn by Molmil
Structure of Lipase TL from bulk agarose grown crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
7APP
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BU of 7app by Molmil
Structure of Lipase TL from capillary grown crystal in the presence of agarose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
6JOE
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BU of 6joe by Molmil
Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (guanine-N(1)-)-methyltransferase, ...
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2019-03-20
Release date:2019-09-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
1RQ4
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BU of 1rq4 by Molmil
Crystallographic Analysis of the Interaction of Nitric Oxide with Quaternary-T Human Hemoglobin, HEMOGLOBIN EXPOSED TO NO UNDER AEROBIC CONDITIONS
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, NITRIC OXIDE, ...
Authors:Chan, N.L, Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2003-12-04
Release date:2003-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystallographic analysis of the interaction of nitric oxide with quaternary-T human hemoglobin.
Biochemistry, 43, 2004
1RQ3
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BU of 1rq3 by Molmil
Crystallographic Analysis of the Interaction of Nitric Oxide with Quaternary-T Human Deoxyhemoglobin, Deoxyhemoglobin
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chan, N.L, Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2003-12-04
Release date:2003-12-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystallographic analysis of the interaction of nitric oxide with quaternary-T human hemoglobin.
Biochemistry, 43, 2004
1RPS
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BU of 1rps by Molmil
Crystallographic Analysis of the Interaction of Nitric Oxide with Quaternary-T Human Hemoglobin. Hemoglobin exposed to NO under anerobic conditions
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, NITRIC OXIDE, ...
Authors:Chan, N.-L, Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2003-12-03
Release date:2003-12-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystallographic analysis of the interaction of nitric oxide with quaternary-T human hemoglobin.
Biochemistry, 43, 2004
8F25
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BU of 8f25 by Molmil
Cryo-EM structure of Lumazine synthase nanoparticle linked to VP8* antigen
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase
Authors:Mangala Prasad, V, Lee, K.K.
Deposit date:2022-11-07
Release date:2023-04-12
Last modified:2024-01-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:mRNA-based VP8* nanoparticle vaccines against rotavirus are highly immunogenic in rodents.
Npj Vaccines, 8, 2023
1RQA
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BU of 1rqa by Molmil
Crystallographic Analysis of the Interaction of Nitric Oxide with Quaternary-T Human Hemoglobin. Beta W73E hemoglobin exposed to NO under anaerobic conditions
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, NITRIC OXIDE, ...
Authors:Chan, N.-L, Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2003-12-04
Release date:2005-01-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystallographic analysis of the interaction of nitric oxide with quaternary-T human hemoglobin.
Biochemistry, 43, 2004
3LVL
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BU of 3lvl by Molmil
Crystal Structure of E.coli IscS-IscU complex
Descriptor: Cysteine desulfurase, NifU-like protein, PYRIDOXAL-5'-PHOSPHATE
Authors:Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-02-22
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010
3Q3Y
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BU of 3q3y by Molmil
Complex structure of HEVB EV93 main protease 3C with Compound 1 (AG7404)
Descriptor: 1,2-ETHANEDIOL, AMMONIUM ION, HEVB EV93 3C protease, ...
Authors:Costenaro, L, Kaczmarska, Z, Arnan, C, Sola, M, Coutard, B, Norder, H, Canard, B, Coll, M.
Deposit date:2010-12-22
Release date:2011-09-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural Basis for Antiviral Inhibition of the Main Protease, 3C, from Human Enterovirus 93.
J.Virol., 85, 2011
1Z2Z
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BU of 1z2z by Molmil
Crystal Structure of the Putative tRNA pseudouridine synthase D (TruD) from Methanosarcina mazei, Northeast Structural Genomics Target MaR1
Descriptor: Probable tRNA pseudouridine synthase D
Authors:Forouhar, F, Yong, W, Ciano, M, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-03-10
Release date:2005-04-26
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Putative tRNA pseudouridine synthase D (TruD) from Methanosarcina mazei, Northeast Structural Genomics Target MaR1
To be Published
2DNH
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BU of 2dnh by Molmil
Solution structure of RNA binding domain in Bruno-like 5 RNA binding protein
Descriptor: Bruno-like 5, RNA binding protein
Authors:Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-26
Release date:2006-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RNA binding domain in Bruno-like 5 RNA binding protein
To be Published

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