2D17

Solution RNA structure of stem-bulge-stem region of the HIV-1 dimerization initiation site

Summary for 2D17

Related2D18 2D19 2D1A 2D1B
Descriptor5'-R(*CP*GP*GP*CP*AP*AP*GP*AP*GP*GP*CP*GP*AP*CP*CP*C)-3', 5'-R(*GP*GP*GP*UP*CP*GP*GP*CP*UP*UP*GP*CP*UP*G)-3' (2 entities in total)
Functional Keywordsdis, hiv-1, rna
Total number of polymer chains2
Total molecular weight9685.88
Authors
Baba, S.,Takahashi, K.,Noguchi, S.,Takaku, H.,Koyanagi, Y.,Yamamoto, N.,Kawai, G. (deposition date: 2005-08-15, release date: 2005-11-01, Last modification date: 2011-07-13)
Primary citation
Baba, S.,Takahashi, K.,Noguchi, S.,Takaku, H.,Koyanagi, Y.,Yamamoto, N.,Kawai, G.
Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138:583-592, 2005
PubMed: 16272570 (PDB entries with the same primary citation)
DOI: 10.1093/jb/mvi158
MImport into Mendeley
Experimental method
SOLUTION NMR
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Structure validation

ClashscoreRNA backbone10.69MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures