Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2G1S
DownloadVisualize
BU of 2g1s by Molmil
Ketopiperazine-Based Renin Inhibitors: Optimization of the C Ring
Descriptor: (2S)-6-(2,4-DIAMINO-6-ETHYLPYRIMIDIN-5-YL)-2-(3,5-DIFLUOROPHENYL)-4-(3-METHOXYPROPYL)-2H-1,4-BENZOXAZIN-3(4H)-ONE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin
Authors:Holsworth, D.D, Jalaiea, M, Zhanga, E, Mcconnella, P.
Deposit date:2006-02-14
Release date:2006-06-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ketopiperazine-Based Renin Inhibitors: Optimization of the "C" Ring
BIOORG.MED.CHEM.LETT., 16, 2006
2RCK
DownloadVisualize
BU of 2rck by Molmil
Crystal structure of juvenile hormone binding protein from Galleria mellonella hemolymph
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Juvenile hormone binding protein, ...
Authors:Kolodziejczyk, R, Bujacz, G, Jakob, M, Ozyhar, A, Jaskolski, M, Kochman, M.
Deposit date:2007-09-20
Release date:2008-03-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Insect Juvenile Hormone Binding Protein Shows Ancestral Fold Present in Human Lipid-Binding Proteins.
J.Mol.Biol., 377, 2008
7D7V
DownloadVisualize
BU of 7d7v by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+) and U1A protein
Descriptor: 17delU1A (58-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chen, H, Ren, A.M.
Deposit date:2020-10-06
Release date:2020-11-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
2G28
DownloadVisualize
BU of 2g28 by Molmil
E. Coli Pyruvate Dehydrogenase H407A variant Phosphonolactylthiamin Diphosphate Complex
Descriptor: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, MAGNESIUM ION, Pyruvate dehydrogenase E1 component
Authors:Furey, W, Arjunan, P, Chandrasekhar, K.
Deposit date:2006-02-15
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Thiamin-bound, Pre-decarboxylation Reaction Intermediate Analogue in the Pyruvate Dehydrogenase E1 Subunit Induces Large Scale Disorder-to-Order Transformations in the Enzyme and Reveals Novel Structural Features in the Covalently Bound Adduct.
J.Biol.Chem., 281, 2006
5HXX
DownloadVisualize
BU of 5hxx by Molmil
Crystal structure of AspAT from Corynebacterium glutamicum
Descriptor: 2-OXOGLUTARIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE, ...
Authors:Son, H.-F, Kim, K.-J.
Deposit date:2016-01-31
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into a novel class of aspartate aminotransferase from Corynebacterium glutamicum
To be published
7S5N
DownloadVisualize
BU of 7s5n by Molmil
Crystal Structure of a Putative uncharacterized protein from Mycobacterium marinum
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, MymaA.17060.a, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-09-10
Release date:2021-09-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of a Putative uncharacterized protein from Mycobacterium marinum
to be published
5HYA
DownloadVisualize
BU of 5hya by Molmil
Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchangerNCX_Mj soaked with 150 mM Na+ and nominal Ca2+
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ACETATE ION, CALCIUM ION, ...
Authors:Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D.
Deposit date:2016-02-01
Release date:2016-05-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger
Nat.Struct.Mol.Biol., 23, 2016
5HKV
DownloadVisualize
BU of 5hkv by Molmil
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 23s ribosomal RNA, 50S ribosomal protein L13, ...
Authors:Yonath, A, Matzov, D, Eyal, Z, Ben Hamou, R, Zimmerman, E, Rozenberg, H, Bashan, A, Fridman, M.
Deposit date:2016-01-14
Release date:2017-05-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.66 Å)
Cite:Structural insights of lincosamides targeting the ribosome of Staphylococcus aureus.
Nucleic Acids Res., 45, 2017
7S5E
DownloadVisualize
BU of 7s5e by Molmil
Crystal structure of a guanylate kinase from Stenotrophomonas maltophilia K279a with heterogeneous ligand states of GMP/ADP, GMP/-, GDP/-, and GMP/ATPgS
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-09-10
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a guanylate kinase from Stenotrophomonas maltophilia K279c with heterogeneous ligand states of GMP/ADP, GMP/-, GDP/-, and GMP/ATPgS.
To Be Published
2GAE
DownloadVisualize
BU of 2gae by Molmil
Crystal structure of MltA from E. coli
Descriptor: Membrane-bound lytic murein transglycosylase A
Authors:Powell, A.J, Liu, Z.J, Nicholas, R.A, Davies, C.
Deposit date:2006-03-08
Release date:2006-05-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
J.Mol.Biol., 359, 2006
5HYL
DownloadVisualize
BU of 5hyl by Molmil
Crystal structure of DR2231_E47A mutant in complex with dUMPNPP and magnesium
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DR2231, MAGNESIUM ION
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-02-01
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
6XF8
DownloadVisualize
BU of 6xf8 by Molmil
DLP 5 fold
Descriptor: Inner capsid protein lambda-1, Inner capsid protein sigma-2, Outer capsid protein mu-1, ...
Authors:Sutton, G, Sun, D.P, Fu, X.F, Kotecha, A, Hecksel, G.W, Clare, D.K, Zhang, P, Stuart, D, Boyce, M.
Deposit date:2020-06-15
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Assembly intermediates of orthoreovirus captured in the cell.
Nat Commun, 11, 2020
2GAU
DownloadVisualize
BU of 2gau by Molmil
Crystal structure of transcriptional regulator, Crp/Fnr family from Porphyromonas gingivalis (APC80792), Structural genomics, MCSG
Descriptor: transcriptional regulator, Crp/Fnr family
Authors:Rotella, F.J, Zhang, R.G, Mulligan, R, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-09
Release date:2006-04-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.9-A crystal structure of transcriptional regulator, Crp/Fnr family from Porphyromonas gingivalis
To be Published
2G4S
DownloadVisualize
BU of 2g4s by Molmil
Anomalous substructure of NBR1PB1
Descriptor: ACETIC ACID, CHLORIDE ION, Next to BRCA1 gene 1 protein
Authors:Mueller-Dieckmann, C, Weiss, M.S.
Deposit date:2006-02-22
Release date:2007-02-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths.
Acta Crystallogr.,Sect.D, 63, 2007
3L73
DownloadVisualize
BU of 3l73 by Molmil
Cytochrome BC1 complex from chicken with triazolone inhibitor
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 4-[7-(3,3-dimethylbut-1-yn-1-yl)naphthalen-1-yl]-5-methoxy-2-methyl-2,4-dihydro-3H-1,2,4-triazol-3-one, CARDIOLIPIN, ...
Authors:Huang, L, Berry, E.A.
Deposit date:2009-12-27
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors.
To be Published
7S14
DownloadVisualize
BU of 7s14 by Molmil
Crystal structure of putative NAD(P)H-flavin oxidoreductase from Haemophilus influenzae 86-028NP
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kim, Y, Maltseva, N, Endres, M, Crofts, T, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-08-31
Release date:2021-10-06
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Functional and Structural Characterization of Diverse NfsB Chloramphenicol Reductase Enzymes from Human Pathogens.
Microbiol Spectr, 10, 2022
2G6F
DownloadVisualize
BU of 2g6f by Molmil
Crystal Structure of the SH3 Domain of betaPIX in Complex with a High Affinity Peptide from PAK2
Descriptor: COBALT HEXAMMINE(III), Rho guanine nucleotide exchange factor 7
Authors:Hoelz, A.
Deposit date:2006-02-24
Release date:2006-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Crystal Structure of the SH3 Domain of betaPIX in Complex with a High Affinity Peptide from PAK2
J.Mol.Biol., 358, 2006
7D7Z
DownloadVisualize
BU of 7d7z by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
Descriptor: 18GAAA(52-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chen, H, Ren, A.M.
Deposit date:2020-10-06
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7S2N
DownloadVisualize
BU of 7s2n by Molmil
Crystal structure of the F337L mutation of Trypanosoma cruzi glucokinase in the apo form (open conformation)
Descriptor: Glucokinase 1
Authors:Carey, S.M, Nettles, R.B, Daneshian, L, Chruszcz, M, D'Antonio, E.L.
Deposit date:2021-09-03
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the F337L mutation of Trypanosoma cruzi glucokinase in the apo form (open conformation)
To Be Published
7SBC
DownloadVisualize
BU of 7sbc by Molmil
Crystal structure of a GMP synthase from Acinetobacter baumannii AB5075-UW
Descriptor: CHLORIDE ION, GMP synthase [glutamine-hydrolyzing], MAGNESIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-09-24
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of a GMP synthase from Acinetobacter baumannii AB5075-UW
To Be Published
2G8A
DownloadVisualize
BU of 2g8a by Molmil
Lactobacillus casei Y261M in complex with substrate, dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, thymidylate synthase
Authors:Finer-Moore, J.S, Stroud, R.M.
Deposit date:2006-03-02
Release date:2006-03-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261
Biochemistry, 45, 2006
6XRB
DownloadVisualize
BU of 6xrb by Molmil
Crystal structure of SciW from Salmonella typhimurium
Descriptor: SciW, TRIETHYLENE GLYCOL
Authors:Sachar, K, Ahmad, S, Whitney, J.C, Prehna, G.
Deposit date:2020-07-11
Release date:2020-12-30
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural basis for effector transmembrane domain recognition by type VI secretion system chaperones.
Elife, 9, 2020
5HGP
DownloadVisualize
BU of 5hgp by Molmil
Hexameric HIV-1 CA in complex with hexacarboxybenzene
Descriptor: BENZENE HEXACARBOXYLIC ACID, Capsid protein P24
Authors:Jacques, D.A, James, L.C.
Deposit date:2016-01-08
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:HIV-1 uses dynamic capsid pores to import nucleotides and fuel encapsidated DNA synthesis.
Nature, 536, 2016
7S2H
DownloadVisualize
BU of 7s2h by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in the apo form (open conformation)
Descriptor: CITRATE ANION, Glucokinase 1, putative, ...
Authors:Kearns, S.P, Daneshian, L, Swartz, P.D, Carey, S.M, Chruszcz, M, D'Antonio, E.L.
Deposit date:2021-09-03
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Trypanosoma cruzi glucokinase in the apo form (open conformation)
To Be Published
2RC3
DownloadVisualize
BU of 2rc3 by Molmil
Crystal structure of CBS domain, NE2398
Descriptor: BROMIDE ION, CBS domain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dong, A, Xu, X, Korniyenko, Y, Yakunin, A, Zheng, H, Walker, J.R, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-19
Release date:2007-10-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of CBS domain, NE2398.
To be Published

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon