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7KCJ
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BU of 7kcj by Molmil
The crystal structure of the translation initiation factor EIF4E5 from Leishmania major
Descriptor: Eukaryotic translation initiation factor 4E type 5
Authors:Lima, G.B, Guimaraes, B.G.
Deposit date:2020-10-05
Release date:2021-06-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:The translation initiation factor EIF4E5 from Leishmania: crystal structure and interacting partners.
Rna Biol., 18, 2021
5T3T
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BU of 5t3t by Molmil
Ebola virus VP30 CTD bound to nucleoprotein
Descriptor: Fusion protein of Nucleoprotein and Minor nucleoprotein VP30, SULFATE ION
Authors:Kirchdoerfer, R.N, Moyer, C.L, Abelson, D.M, Saphire, E.O.
Deposit date:2016-08-26
Release date:2016-09-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Ebola Virus VP30-NP Interaction Is a Regulator of Viral RNA Synthesis.
Plos Pathog., 12, 2016
2Q0C
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BU of 2q0c by Molmil
Terminal uridylyl transferase 4 from Trypanosoma brucei with bound CTP
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA uridylyl transferase
Authors:Stagno, J, Luecke, H.
Deposit date:2007-05-21
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dual role of the RNA substrate in selectivity and catalysis by terminal uridylyl transferases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3AA3
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BU of 3aa3 by Molmil
A52L E. coli RNase HI
Descriptor: Ribonuclease HI
Authors:Takano, K.
Deposit date:2009-11-11
Release date:2010-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Protein core adaptability: crystal structures of the cavity-filling variants of Escherichia coli RNase HI
Protein Pept.Lett., 17, 2010
2Q0F
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BU of 2q0f by Molmil
Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UMP
Descriptor: MAGNESIUM ION, RNA uridylyl transferase, URIDINE 5'-TRIPHOSPHATE, ...
Authors:Stagno, J, Luecke, H.
Deposit date:2007-05-21
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dual role of the RNA substrate in selectivity and catalysis by terminal uridylyl transferases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3AA2
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BU of 3aa2 by Molmil
A52I E. coli RNase HI
Descriptor: Ribonuclease HI
Authors:Takano, K.
Deposit date:2009-11-11
Release date:2010-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein core adaptability: crystal structures of the cavity-filling variants of Escherichia coli RNase HI
Protein Pept.Lett., 17, 2010
3AA5
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BU of 3aa5 by Molmil
A52F E.coli RNase HI
Descriptor: Ribonuclease HI
Authors:Takano, K.
Deposit date:2009-11-11
Release date:2010-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein core adaptability: crystal structures of the cavity-filling variants of Escherichia coli RNase HI
Protein Pept.Lett., 17, 2010
4OIN
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BU of 4oin by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077
Descriptor: (2Z)-2-methylbut-2-enoic acid, 5'-D(*CP*CP*T*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', ...
Authors:Zhang, Y, Ebright, R.H, Arnold, E.
Deposit date:2014-01-20
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.
Elife, 3, 2014
4OIO
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Crystal structure of Thermus thermophilus pre-insertion substrate complex for de novo transcription initiation
Descriptor: 5'-D(*CP*CP*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, ...
Authors:Zhang, Y, Ebright, R.H, Arnold, E.
Deposit date:2014-01-20
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.
Elife, 3, 2014
2Q0E
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BU of 2q0e by Molmil
Terminal uridylyl transferase 4 from Trypanosoma brucei with bound GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA uridylyl transferase
Authors:Stagno, J, Luecke, H.
Deposit date:2007-05-21
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dual role of the RNA substrate in selectivity and catalysis by terminal uridylyl transferases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2Q0D
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BU of 2q0d by Molmil
Terminal uridylyl transferase 4 from Trypanosoma brucei with bound ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA uridylyl transferase
Authors:Stagno, J, Luecke, H.
Deposit date:2007-05-21
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dual role of the RNA substrate in selectivity and catalysis by terminal uridylyl transferases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7MRJ
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BU of 7mrj by Molmil
Crystal structure of a novel ubiquitin-like TINCR
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Forouhar, F, Morgado-Palacin, L, Brown, J.A, Martinez, T, Pedrero, J.M.G, Reglero, C, Chaudhry, I, Vaughan, J, Rodriguez-Perales, S, Allonca, E, Granda-Diaz, R, Quinn, S.A, Fernandez, A.F, Fraga, M.F, Kim, A.L, Santos-Juanes, J, Owens, D.M, Rodrigo, J.P, Saghatelian, A, Ferrando, A.A.
Deposit date:2021-05-07
Release date:2022-03-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:The TINCR ubiquitin-like microprotein is a tumor suppressor in squamous cell carcinoma.
Nat Commun, 14, 2023
2Q0G
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BU of 2q0g by Molmil
Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UPU
Descriptor: CHLORIDE ION, MAGNESIUM ION, RNA uridylyl transferase, ...
Authors:Stagno, J, Luecke, H.
Deposit date:2007-05-21
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dual role of the RNA substrate in selectivity and catalysis by terminal uridylyl transferases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3NCU
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BU of 3ncu by Molmil
Structural and functional insights into pattern recognition by the innate immune receptor RIG-I
Descriptor: 5'-R(*(GDP)P*AP*CP*GP*CP*UP*AP*GP*CP*GP*UP*C)-3', RIG-I, ZINC ION
Authors:Sheng, G, Li, H.
Deposit date:2010-06-05
Release date:2010-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural and functional insights into 5'-ppp RNA pattern recognition by the innate immune receptor RIG-I.
Nat.Struct.Mol.Biol., 17, 2010
3KTV
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BU of 3ktv by Molmil
Crystal structure of the human SRP19/S-domain SRP RNA complex
Descriptor: MAGNESIUM ION, POTASSIUM ION, SRP RNA, ...
Authors:Wild, K, Bange, G, Bozkurt, G, Sinning, I.
Deposit date:2009-11-26
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural insights into the assembly of the human and archaeal signal recognition particles.
Acta Crystallogr.,Sect.D, 66, 2010
1O9G
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BU of 1o9g by Molmil
rRNA methyltransferase aviRa from Streptomyces viridochromogenes at 1.5A
Descriptor: RRNA METHYLTRANSFERASE
Authors:Mosbacher, T.G, Schulz, G.E.
Deposit date:2002-12-13
Release date:2003-05-16
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of the Avilamycin Resistance-Conferring Methyltransferase Avira from Streptomyces Viridochromogenes
J.Mol.Biol., 329, 2003
6A4E
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BU of 6a4e by Molmil
Two linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H
Descriptor: Oligoribonuclease, RNA (5'-R(P*UP*UP*UP*UP*U)-3')
Authors:Lee, C.W, Park, S, Lee, J.H.
Deposit date:2018-06-19
Release date:2019-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis of small RNA hydrolysis by oligoribonuclease (CpsORN) from Colwellia psychrerythraea strain 34H.
Sci Rep, 9, 2019
3LD0
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BU of 3ld0 by Molmil
Crystal structure of B.licheniformis Anti-TRAP protein, an antagonist of TRAP-RNA interactions
Descriptor: Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA, MAGNESIUM ION, ...
Authors:Shevtsov, M.B, Chen, Y, Isupov, M.N, Gollnick, P, Antson, A.A.
Deposit date:2010-01-12
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacillus licheniformis Anti-TRAP can assemble into two types of dodecameric particles with the same symmetry but inverted orientation of trimers.
J.Struct.Biol., 170, 2010
2L3E
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BU of 2l3e by Molmil
Solution structure of P2a-J2a/b-P2b of human telomerase RNA
Descriptor: 35-MER
Authors:Zhang, Q, Kim, N, Peterson, R.D, Wang, Z, Feigon, J.
Deposit date:2010-09-13
Release date:2010-11-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Inaugural Article: Structurally conserved five nucleotide bulge determines the overall topology of the core domain of human telomerase RNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
1VEA
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BU of 1vea by Molmil
Crystal Structure of HutP, an RNA binding antitermination protein
Descriptor: Hut operon positive regulatory protein, N-(2-NAPHTHYL)HISTIDINAMIDE
Authors:Kumarevel, T.S, Fujimoto, Z, Karthe, P, Oda, M, Mizuno, H, Kumar, P.K.R.
Deposit date:2004-03-29
Release date:2004-07-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Activated HutP; An RNA Binding Protein that Regulates Transcription of the hut Operon in Bacillus subtilis
Structure, 12, 2004
4LK1
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BU of 4lk1 by Molmil
Crystal Structure Analysis of the E.coli holoenzyme
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Bae, B, Darst, S.A.
Deposit date:2013-07-05
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.8369 Å)
Cite:Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase involves misappropriation of sigma 70 domain 1.1.
Proc.Natl.Acad.Sci.USA, 110, 2013
4LJZ
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BU of 4ljz by Molmil
Crystal Structure Analysis of the E.coli holoenzyme
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Bae, B, Darst, S.A.
Deposit date:2013-07-05
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5871 Å)
Cite:Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase involves misappropriation of sigma 70 domain 1.1.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MST
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BU of 2mst by Molmil
MUSASHI1 RBD2, NMR
Descriptor: PROTEIN (MUSASHI1)
Authors:Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
Deposit date:1999-05-19
Release date:2000-05-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
2MSS
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BU of 2mss by Molmil
MUSASHI1 RBD2, NMR
Descriptor: PROTEIN (MUSASHI1)
Authors:Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
Deposit date:1999-05-19
Release date:2000-05-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
2J04
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BU of 2j04 by Molmil
The tau60-tau91 subcomplex of yeast transcription factor IIIC
Descriptor: HYPOTHETICAL PROTEIN YPL007C, YDR362CP
Authors:Mylona, A, Fernandez-Tornero, C, Legrand, P, Muller, C.W.
Deposit date:2006-07-31
Release date:2006-10-23
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the Tau60/Deltatau91 Subcomplex of Yeast Transcription Factor Iiic: Insights Into Preinitiation Complex Assembly
Mol.Cell, 24, 2006

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