Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1IQB
DownloadVisualize
BU of 1iqb by Molmil
Crystal Structure of Urtica dioica Agglutinin Isolectin I
Descriptor: AGGLUTININ ISOLECTIN I, ZINC ION
Authors:Harata, K, Schubert, W.D, Muraki, M.
Deposit date:2001-07-15
Release date:2001-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Urtica dioica agglutinin isolectin I: dimer formation mediated by two zinc ions bound at the sugar-binding site.
Acta Crystallogr.,Sect.D, 57, 2001
2NX3
DownloadVisualize
BU of 2nx3 by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase
Descriptor: (2R,4R,5R,6R,7R)-2,4,5,6,7-PENTAHYDROXY-2,8-BIS(PHOSPHONOOXY)OCTANOIC ACID, 2-dehydro-3-deoxyphosphooctonate aldolase, ARABINOSE-5-PHOSPHATE, ...
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-16
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2C8P
DownloadVisualize
BU of 2c8p by Molmil
lysozyme (60sec) and UV laser excited fluorescence
Descriptor: LYSOZYME C
Authors:Vernede, X, Lavault, B, Ohana, J, Nurizzo, D, Joly, J, Jacquamet, L, Felisaz, F, Cipriani, F, Bourgeois, D.
Deposit date:2005-12-06
Release date:2006-03-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Uv Laser-Excited Fluorescence as a Tool for the Visualization of Protein Crystals Mounted in Loops.
Acta Crystallogr.,Sect.D, 62, 2006
2IYN
DownloadVisualize
BU of 2iyn by Molmil
The co-factor-induced pre-active conformation in PhoB
Descriptor: MAGNESIUM ION, PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB
Authors:Sola, M, Drew, D.L, Blanco, A.G, Gomis-Ruth, F.X, Coll, M.
Deposit date:2006-07-19
Release date:2006-08-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The Cofactor-Induced Pre-Active Conformation in Phob.
Acta Crystallogr.,Sect.D, 62, 2006
2IYA
DownloadVisualize
BU of 2iya by Molmil
The crystal structure of macrolide glycosyltransferases: A blueprint for antibiotic engineering
Descriptor: (3S,5R,6S,7R,8R,11R,12S,13R,14S,15S)-6-HYDROXY-5,7,8,11,13,15-HEXAMETHYL-4,10-DIOXO-14-{[3,4,6-TRIDEOXY-3-(DIMETHYLAMINO)-BETA-D-XYLO-HEXOPYRANOSYL]OXY}-1,9-DIOXASPIRO[2.13]HEXADEC-12-YL 2,6-DIDEOXY-3-O-METHYL-ALPHA-L-ARABINO-HEXOPYRANOSIDE, OLEANDOMYCIN GLYCOSYLTRANSFERASE, URIDINE-5'-DIPHOSPHATE
Authors:Bolam, D.N, Roberts, S.M, Proctor, M.R, Turkenburg, J.P, Dodson, E.J, Martinez-Fleites, C, Yang, M, Davis, B.G, Davies, G.J, Gilbert, H.J.
Deposit date:2006-07-13
Release date:2007-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Two Macrolide Glycosyltransferases Provides a Blueprint for Host Cell Antibiotic Immunity.
Proc.Natl.Acad.Sci.USA, 104, 2007
1SY8
DownloadVisualize
BU of 1sy8 by Molmil
Structure of DNA sequence d-TGATCA by two-dimensional nuclear magnetic resonance spec and restrained molecular dynamics
Descriptor: 5'-D(P*TP*GP*AP*TP*CP*A)-3'
Authors:Barthwal, R, Awasthi, P, Narang, M, Sharma, U, Srivastava, N.
Deposit date:2004-04-01
Release date:2005-01-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of DNA sequence d-TGATCA by two-dimensional nuclear magnetic resonance spectroscopy and restrained molecular dynamics
J.STRUCT.BIOL., 148, 2004
2J79
DownloadVisualize
BU of 2j79 by Molmil
Beta-glucosidase from Thermotoga maritima in complex with galacto- hydroximolactam
Descriptor: (2E,3R,4R,5R,6S)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)-2-PIPERIDINONE, ACETATE ION, BETA-GLUCOSIDASE A, ...
Authors:Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
Deposit date:2006-10-06
Release date:2006-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
1YXC
DownloadVisualize
BU of 1yxc by Molmil
Structure of E. coli dihydrodipicolinate synthase to 1.9 A
Descriptor: CHLORIDE ION, POTASSIUM ION, dihydrodipicolinate synthase
Authors:Dobson, R.C.J, Griffin, M.D.W, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-02-20
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structures of native and (S)-lysine-bound dihydrodipicolinate synthase from Escherichia coli with improved resolution show new features of biological significance.
Acta Crystallogr.,Sect.D, 61, 2005
4CJO
DownloadVisualize
BU of 4cjo by Molmil
Spectroscopically-validated structure of ferrous cytochrome c prime from Alcaligenes xylosoxidans, reduced at 180K using X-rays
Descriptor: CYTOCHROME C', HEME C
Authors:Kekilli, D, Dworkowski, F, Antonyuk, S, Hough, M.A.
Deposit date:2013-12-21
Release date:2014-05-21
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Fingerprinting Redox and Ligand States in Haemprotein Crystal Structures Using Resonance Raman Spectroscopy.
Acta Crystallogr.,Sect.D, 70, 2014
2O1S
DownloadVisualize
BU of 2o1s by Molmil
1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Escherichia coli
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xiang, S, Usunow, G, Lange, G, Busch, M, Tong, L.
Deposit date:2006-11-29
Release date:2006-12-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of 1-Deoxy-D-xylulose 5-Phosphate Synthase, a Crucial Enzyme for Isoprenoids Biosynthesis.
J.Biol.Chem., 282, 2007
1OZ0
DownloadVisualize
BU of 1oz0 by Molmil
CRYSTAL STRUCTURE OF THE HOMODIMERIC BIFUNCTIONAL TRANSFORMYLASE AND CYCLOHYDROLASE ENZYME AVIAN ATIC IN COMPLEX WITH A MULTISUBSTRATE ADDUCT INHIBITOR BETA-DADF.
Descriptor: 2-[4-((2-AMINO-4-OXO-3,4-DIHYDRO-PYRIDO[3,2-D]PYRIMIDIN-6-YLMETHYL)-{3-[5-CARBAMOYL-3-(3,4- DIHYDROXY-5-PHOSPHONOOXYMETHYL-TETRAHYDRO-FURAN-2-YL)-3H-IMIDAZOL-4-YL]-ACRYLOYL}-AMINO)-BENZOYLAMINO]- PENTANEDIOIC ACID, Bifunctional purine biosynthesis protein PURH, PHOSPHATE ION, ...
Authors:Wolan, D.W, Greasley, S.E, Wall, M.J, Benkovic, S.J, Wilson, I.A.
Deposit date:2003-04-07
Release date:2003-09-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Avian AICAR Transformylase with a Multisubstrate Adduct Inhibitor beta-DADF Identifies the Folate Binding Site.
Biochemistry, 42, 2003
2IFN
DownloadVisualize
BU of 2ifn by Molmil
PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA
Descriptor: PF1 FILAMENTOUS BACTERIOPHAGE
Authors:Marvin, D.A.
Deposit date:1994-01-16
Release date:1996-01-01
Last modified:2024-02-21
Method:FIBER DIFFRACTION (4 Å)
Cite:Pf1 filamentous bacteriophage: refinement of a molecular model by simulated annealing using 3.3 A resolution X-ray fibre diffraction data.
Acta Crystallogr.,Sect.D, 51, 1995
2BCH
DownloadVisualize
BU of 2bch by Molmil
A possible of Second calcium ion in interfacial binding: Atomic and Medium resolution crystal structures of the quadruple mutant of phospholipase A2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Sekar, K, Yogavel, M, Velmurugan, D, Poi, M.J, Dauter, Z, Tsai, M.D.
Deposit date:2005-10-19
Release date:2006-07-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr.,Sect.D, 62, 2006
2HTB
DownloadVisualize
BU of 2htb by Molmil
Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form
Descriptor: Putative enzyme related to aldose 1-epimerase
Authors:Chittori, S, Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-07-25
Release date:2007-01-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the putative mutarotase YeaD from Salmonella typhimurium: structural comparison with galactose mutarotases.
Acta Crystallogr.,Sect.D, 63, 2007
1KBZ
DownloadVisualize
BU of 1kbz by Molmil
Crystal Structure of apo-dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) from Salmonella enterica serovar Typhimurium
Descriptor: MAGNESIUM ION, dTDP-glucose oxidoreductase
Authors:Blankenfeldt, W, Kerr, I.D, Giraud, M.F, McMiken, H.J, Leonard, G.A, Whitfield, C, Messner, P, Graninger, M, Naismith, J.H.
Deposit date:2001-11-07
Release date:2002-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Variation on a theme of SDR. dTDP-6-deoxy-L- lyxo-4-hexulose reductase (RmlD) shows a new Mg2+-dependent dimerization mode.
Structure, 10, 2002
5TBG
DownloadVisualize
BU of 5tbg by Molmil
The Solution Structure of the Magnesium-bound Conantokin-R1B Mutant
Descriptor: Conantokin-R1B
Authors:Castellino, F.J, Yuan, Y.
Deposit date:2016-09-12
Release date:2017-06-28
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:Discerning the Role of the Hydroxyproline Residue in the Structure of Conantokin Rl-B and Its Role in GluN2B Subunit-Selective Antagonistic Activity toward N-Methyl-d-Aspartate Receptors.
Biochemistry, 55, 2016
1RK0
DownloadVisualize
BU of 1rk0 by Molmil
Mhc Class I H-2Kb Heavy Chain Complexed With beta-2 Microglobulin and Herpes Simplex Virus Glycoprotein B peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, Glycoprotein B, ...
Authors:Miley, M.J, Messaoudi, I, Nikolich-Zugich, J, Fremont, D.H.
Deposit date:2003-11-20
Release date:2004-12-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Basis for the Restoration of TCR Recognition of an MHC Allelic Variant by Peptide Secondary Anchor Substitution
J.Exp.Med., 200, 2004
1OOC
DownloadVisualize
BU of 1ooc by Molmil
Mutations in the T1.5 loop of pectate lyase A
Descriptor: Pectate lyase A
Authors:Dehdashti, S.J, Doan, C.N, Chao, K, Vordtriede, P.B, Yoder, M.D.
Deposit date:2003-03-03
Release date:2004-03-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Effect of mutations in the T1.5 loop of pectate lyase A from Erwinia chrysanthemi EC16.
Acta Crystallogr.,Sect.D, 59, 2003
2D3O
DownloadVisualize
BU of 2d3o by Molmil
Structure of Ribosome Binding Domain of the Trigger Factor on the 50S ribosomal subunit from D. radiodurans
Descriptor: 23S RIBOSOMAL RNA, 50S RIBOSOMAL PROTEIN L23, 50S RIBOSOMAL PROTEIN L24, ...
Authors:Schluenzen, F, Wilson, D.N, Hansen, H.A, Tian, P, Harms, J.M, McInnes, S.J, Albrecht, R, Buerger, J, Wilbanks, S.M, Fucini, P.
Deposit date:2005-09-30
Release date:2005-12-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:The Binding Mode of the Trigger Factor on the Ribosome: Implications for Protein Folding and SRP Interaction
Structure, 13, 2005
1RM0
DownloadVisualize
BU of 1rm0 by Molmil
Crystal Structure of Myo-Inositol 1-Phosphate Synthase From Saccharomyces cerevisiae In Complex With NAD+ and 2-deoxy-D-glucitol 6-(E)-vinylhomophosphonate
Descriptor: (3,4,5,7-TETRAHYDROXY-HEPT-1-ENYL)-PHOSPHONIC ACID, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, X, Foley, K.M, Geiger, J.H.
Deposit date:2003-11-26
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of the 1L-myo-inositol-1-phosphate synthase-NAD+-2-deoxy-D-glucitol 6-(E)-vinylhomophosphonate complex demands a revision of the enzyme mechanism.
J.Biol.Chem., 279, 2004
3W2Q
DownloadVisualize
BU of 3w2q by Molmil
EGFR kinase domain T790M/L858R mutant with HKI-272
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Epidermal growth factor receptor, N-(4-{[3-chloro-4-(pyridin-2-ylmethoxy)phenyl]amino}-3-cyano-7-ethoxyquinolin-6-yl)-4-(dimethylamino)butanamide
Authors:Sogabe, S, Kawakita, Y, Igaki, S.
Deposit date:2012-12-03
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Approach for the Discovery of Pyrrolo[3,2-d]pyrimidine-Based EGFR T790M/L858R Mutant Inhibitors.
Acs Med.Chem.Lett., 4, 2013
4BLJ
DownloadVisualize
BU of 4blj by Molmil
Galectin-3c in complex with Bisamido-thiogalactoside derivate 2
Descriptor: Bis-(3-deoxy-3-(3-methoxy-benzamido)-b-D-galactopyranosyl)-sulfide, GALECTIN-3
Authors:Noresson, A.L, Oberg, C.T, Engstrom, O, Hakansson, M, Logan, D.T, Leffler, H, Nilsson, U.J.
Deposit date:2013-05-03
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Controlling Protein Conformation Through Electronic Fine-Tuning of Arginine-Arene Interactions: Synthetic, Structural, and Biological Studies
To be Published
1OZ9
DownloadVisualize
BU of 1oz9 by Molmil
Crystal structure of AQ_1354, a hypothetical protein from Aquifex aeolicus
Descriptor: Hypothetical protein AQ_1354
Authors:Oganesyan, V, Busso, D, Brandsen, J, Chen, S, Jancarik, J, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2003-04-08
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.894 Å)
Cite:Structure of the hypothetical protein AQ_1354 from Aquifex aeolicus.
Acta Crystallogr.,Sect.D, 59, 2003
1TDR
DownloadVisualize
BU of 1tdr by Molmil
EXPRESSION, CHARACTERIZATION, AND CRYSTALLOGRAPHIC ANALYSIS OF TELLUROMETHIONYL DIHYDROFOLATE REDUCTASE
Descriptor: CALCIUM ION, CHLORIDE ION, METHOTREXATE, ...
Authors:Lewinski, K, Lebioda, L.
Deposit date:1995-04-13
Release date:1995-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Expression, characterization and crystallographic analysis of telluromethionyl dihydrofolate reductase.
Acta Crystallogr.,Sect.D, 51, 1995
232D
DownloadVisualize
BU of 232d by Molmil
THE HIGH RESOLUTION CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGGCATGCCT)
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*AP*GP*GP*CP*AP*TP*GP*CP*CP*T)-3')
Authors:Nunn, C.M, Neidle, S.
Deposit date:1995-09-05
Release date:1996-03-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The high resolution crystal structure of the DNA decamer d(AGGCATGCCT).
J.Mol.Biol., 256, 1996

225681

건을2024-10-02부터공개중

PDB statisticsPDBj update infoContact PDBjnumon