PDB: 92800 resultsInfo pagesStatus searchChemie searchBIRD

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3E5O	Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser off Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S. Deposit date: 2008-08-14 Release date: 2009-02-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin. Proc.Natl.Acad.Sci.USA, 106, 2009
3E90	West Nile vi rus NS2B-NS3protease in complexed with inhibitor Naph-KKR-H Descriptor: NS2B cofactor, NS3 protease, N~2~-(naphthalen-2-ylcarbonyl)-L-lysyl-N-[(1S)-4-carbamimidamido-1-formylbutyl]-L-lysinamide Authors: Martin, J.L, Robin, G. Deposit date: 2008-08-21 Release date: 2009-01-20 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Structure of West Nile virus NS3 protease: ligand stabilization of the catalytic conformation J.Mol.Biol., 385, 2009
1USI	L-leucine-binding protein with phenylalanine bound Descriptor: LEUCINE-SPECIFIC BINDING PROTEIN, PHENYLALANINE Authors: Magnusson, U, Salopek-Sondi, B, Luck, L.A, Mowbray, S.L. Deposit date: 2003-11-24 Release date: 2003-12-18 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: X-Ray Structures of the Leucine-Binding Protein Illustrate Conformational Changes and the Basis of Ligand Specificity J.Biol.Chem., 279, 2004
4NMG	2'-Trifluoromethylthio-2'-deoxyuridine-modified SRL Descriptor: 23S ribosomal RNA Sarcin Ricin Loop Authors: Ennifar, E, Micura, R, Kosutic, M. Deposit date: 2013-11-15 Release date: 2014-11-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.01 Å) Cite: Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids. J.Am.Chem.Soc., 136, 2014
2KZG	A Transient and Low Populated Protein Folding Intermediate at Atomic Resolution Descriptor: Pre-mRNA-processing factor 40 homolog A Authors: Korzhnev, D.M, Religa, T.L, Banachewicz, W, Fersht, A.R, Kay, L.E. Deposit date: 2010-06-17 Release date: 2010-09-29 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: A transient and low-populated protein-folding intermediate at atomic resolution. Science, 329, 2010
3AF3	Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with GMPPCP and Pantothenate Descriptor: GLYCEROL, PANTOTHENOIC ACID, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... Authors: Chetnani, B, Kumar, P, Surolia, A, Vijayan, M. Deposit date: 2010-02-22 Release date: 2010-05-26 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.35 Å) Cite: M. tuberculosis pantothenate kinase: dual substrate specificity and unusual changes in ligand locations J.Mol.Biol., 400, 2010
3OX0	Crystal structure of glycine riboswitch, unbound state Descriptor: Domain II of glycine riboswitch, MAGNESIUM ION Authors: Huang, L, Serganov, A, Patel, D.J. Deposit date: 2010-09-20 Release date: 2010-12-29 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.049 Å) Cite: Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch. Mol.Cell, 40, 2010
3AF1	Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with GDP Descriptor: CHLORIDE ION, CITRATE ANION, GLYCEROL, ... Authors: Chetnani, B, Kumar, P, Surolia, A, Vijayan, M. Deposit date: 2010-02-19 Release date: 2010-05-26 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.5 Å) Cite: M. tuberculosis pantothenate kinase: dual substrate specificity and unusual changes in ligand locations J.Mol.Biol., 400, 2010
1USK	L-leucine-binding protein with leucine bound Descriptor: LEUCINE, LEUCINE-SPECIFIC BINDING PROTEIN Authors: Magnusson, U, Salopek-Sondi, B, Luck, L.A, Mowbray, S.L. Deposit date: 2003-11-25 Release date: 2003-12-18 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2 Å) Cite: X-Ray Structures of the Leucine-Binding Protein Illustrate Conformational Changes and the Basis of Ligand Specificity J.Biol.Chem., 279, 2004
4A6K	Crystal structure of Slm1-PH domain in complex with D-myo-Inositol-4- phosphate Descriptor: D-MYO-INOSITOL-4-PHOSPHATE, PHOSPHATE ION, PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE-BINDING PROTEIN SLM1 Authors: Anand, K, Maeda, K, Gavin, A.C. Deposit date: 2011-11-04 Release date: 2012-06-13 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural Analyses of Slm1-Ph Domain Demonstrate Ligand Binding in the Non-Canonical Site Plos One, 7, 2012
4A6H	Crystal structure of Slm1-PH domain in complex with Inositol-4- phosphate Descriptor: D-MYO-INOSITOL-4-PHOSPHATE, PHOSPHATE ION, PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE-BINDING PROTEIN SLM1 Authors: Anand, K, Maeda, K, Gavin, A.C. Deposit date: 2011-11-03 Release date: 2012-06-13 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.449 Å) Cite: Structural Analyses of Slm1-Ph Domain Demonstrate Ligand Binding in the Non-Canonical Site Plos One, 7, 2012
2D8T	Solution structure of the RING domain of the human RING finger protein 146 Descriptor: RING finger protein 146, ZINC ION Authors: Miyamoto, K, Kigawa, T, Sato, M, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2005-12-08 Release date: 2006-06-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the RING domain of the human RING finger protein 146 To be Published
2GSX	Complement Receptor Type 2 Descriptor: Complement receptor type 2 Authors: Gilbert, H.E, Asokan, R, Holers, V.M, Perkins, S.J. Deposit date: 2006-04-27 Release date: 2006-09-26 Last modified: 2024-02-14 Method: SOLUTION SCATTERING Cite: The 15 SCR Flexible Extracellular Domains of Human Complement Receptor Type 2 can Mediate Multiple Ligand and Antigen Interactions. J.Mol.Biol., 362, 2006
4NLF	2'-trifluoromethylthio-2'-deoxycytidine-modified SRL Descriptor: 23S ribosomal RNA Sarcin Ricin Loop, SULFATE ION Authors: Ennifar, E, Micura, R, Kosutic, M. Deposit date: 2013-11-14 Release date: 2014-11-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1 Å) Cite: Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids. J.Am.Chem.Soc., 136, 2014
1MHQ	Crystal Structure Of Human GGA2 VHS Domain Descriptor: ADP-ribosylation factor binding protein GGA2 Authors: Zhu, G, Zhang, X.C. Deposit date: 2002-08-20 Release date: 2003-03-11 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of GGA2 VHS domain and its implication in plasticity in the ligand binding pocket FEBS LETT., 537, 2003
1UBZ	Crystal structure of Glu102-mutant human lysozyme doubly labeled with 2',3'-epoxypropyl beta-glycoside of N-acetyllactosamine Descriptor: GLYCEROL, Lysozyme C, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Muraki, M, Harata, K. Deposit date: 2003-04-07 Release date: 2003-04-22 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2 Å) Cite: X-ray structural analysis of the ligand-recognition mechanism in the dual-affinity labeling of c-type lysozyme with 2',3'-epoxypropyl beta-glycoside of N-acetyllactosamine J.MOL.RECOG., 16, 2003
3RBV	Crystal Structure of KijD10, a 3-ketoreductase from Actinomadura kijaniata incomplex with NADP Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... Authors: Holden, H.M, Kubiak, R.L. Deposit date: 2011-03-30 Release date: 2011-06-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Combined Structural and Functional Investigation of a C-3''-Ketoreductase Involved in the Biosynthesis of dTDP-l-Digitoxose. Biochemistry, 50, 2011
1UC0	Crystal structure of wild-type hen-egg white lysozyme singly labeled with 2',3'-epoxypropyl beta-glycoside of N-acetyllactosamine Descriptor: GLYCEROL, Lysozyme C, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Muraki, M, Harata, K. Deposit date: 2003-04-07 Release date: 2003-04-22 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.85 Å) Cite: X-ray structural analysis of the ligand-recognition mechanism in the dual-affinity labeling of c-type lysozyme with 2',3'-epoxypropyl beta-glycoside of N-acetyllactosamine J.MOL.RECOG., 16, 2003
3PV6	Crystal structure of NKp30 bound to its ligand B7-H6 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ig-like domain-containing protein DKFZp686O24166/DKFZp686I21167, ... Authors: Li, Y. Deposit date: 2010-12-06 Release date: 2011-03-16 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure of the activating natural killer cell receptor NKp30 bound to its ligand B7-H6 reveals basis for tumor cell recognition in humans to be published
2AR5	Crystal structure of the mammalian C2alpha-PI3 Kinase PX-domain Descriptor: GLYCEROL, Phosphoinositide 3-kinase Authors: Parkinson, G.N, Vines, D, Driscoll, P.C, Djordjevic, S. Deposit date: 2005-08-19 Release date: 2006-10-24 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Ligand-binding specificity of PI3Kinase C2alpha PX domain. To be Published
2QO6	Crystal structure of the glycine 55 arginine mutant of zebrafish liver bile acid-binding protein complexed with cholic acid Descriptor: CHOLIC ACID, GLYCEROL, ISOPROPYL ALCOHOL, ... Authors: Capaldi, S, Saccomani, G, Perduca, M, Monaco, H.L. Deposit date: 2007-07-20 Release date: 2007-07-31 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A Single Amino Acid Mutation in Zebrafish (Danio rerio) Liver Bile Acid-binding Protein Can Change the Stoichiometry of Ligand Binding. J.Biol.Chem., 282, 2007
2L9V	NMR structure of the FF domain L24A mutant's folding transition state Descriptor: Pre-mRNA-processing factor 40 homolog A Authors: Korzhnev, D.M, Vernon, R.M, Religa, T.L, Hansen, A, Baker, D, Fersht, A.R, Kay, L.E. Deposit date: 2011-02-24 Release date: 2011-09-28 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Nonnative interactions in the FF domain folding pathway from an atomic resolution structure of a sparsely populated intermediate: an NMR relaxation dispersion study. J.Am.Chem.Soc., 133, 2011
8EG3	Structure of human placental steroid (estrone/DHEA) sulfatase at 2.0 angstrom resolution Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, PHOSPHATE ION, ... Authors: Ghosh, D. Deposit date: 2022-09-10 Release date: 2022-12-07 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Structure of human placental steroid sulfatase at 2.0 angstrom resolution: Catalysis, quaternary association, and a secondary ligand site. J.Steroid Biochem.Mol.Biol., 227, 2022
1ITK	Crystal structure of catalase-peroxidase from Haloarcula marismortui Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... Authors: Yamada, Y, Fujiwara, T, Sato, T, Igarashi, N, Tanaka, N. Deposit date: 2002-01-18 Release date: 2002-08-28 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2 Å) Cite: The 2.0 A crystal structure of catalase-peroxidase from Haloarcula marismortui. Nat.Struct.Biol., 9, 2002
2QUE	Saturation of substrate-binding site using two natural ligands: Crystal structure of a ternary complex of phospholipase A2 with anisic acid and ajmaline at 2.25 A resolution Descriptor: 4-METHOXYBENZOIC ACID, AJMALINE, Phospholipase A2 VRV-PL-VIIIa Authors: Kumar, S, Singh, N, Sharma, S, Kaur, P, Singh, T.P. Deposit date: 2007-08-05 Release date: 2007-08-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Saturation of substrate-binding site using two natural ligands: Crystal structure of a ternary complex of phospholipase A2 with anisic acid and ajmaline at 2.25 A resolution To be Published

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