PDB: 45331 resultsInfo pagesStatus searchChemie searchBIRD

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5H9V	Crystal structure of Regnase PIN domain, form I Descriptor: Ribonuclease ZC3H12A, SODIUM ION Authors: Yokogawa, M, Tsushima, T, Adachi, W, Noda, N.N, Inagaki, F. Deposit date: 2015-12-29 Release date: 2016-03-16 Last modified: 2020-02-19 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions Sci Rep, 6, 2016
6HCT	Crystal structure of Archeoglobus fulgidus L7Ae bound to its cognate UTR k-turn Descriptor: 50S ribosomal protein L7Ae, RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*G)-3'), RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*GP*CP*AP*UP*GP*AP*AP*GP*C)-3'), ... Authors: Huang, L, Lilley, D.M.J. Deposit date: 2018-08-16 Release date: 2018-10-31 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (3.091 Å) Cite: The role of RNA structure in translational regulation by L7Ae protein in archaea. RNA, 25, 2019
7YF7	NMR solution structures of the DNA minidumbbell formed by two ATTTT repeats Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*AP*TP*TP*TP*T)-3'), SODIUM ION Authors: Wan, L, Li, J, Guo, P. Deposit date: 2022-07-07 Release date: 2023-01-11 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution Nuclear Magnetic Resonance Structures of ATTTT and ATTTC Pentanucleotide Repeats Associated with SCA37 and FAMEs. Acs Chem Neurosci, 14, 2023
7VM9	Solution NMR structures of DNA minidumbbell formed with two regular CTTTG pentaloops Descriptor: DNA (5'-D(*CP*TP*TP*TP*GP*CP*TP*TP*TP*G)-3'), SODIUM ION Authors: Ngai, C.K, Guo, P. Deposit date: 2021-10-08 Release date: 2022-02-16 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: A purine and a backbone discontinuous site alter the structure and thermal stability of DNA minidumbbells containing two pentaloops. Febs Lett., 596, 2022
3USK	Crystal structure of LeuT bound to L-leucine in space group P21 from lipid bicelles Descriptor: LEUCINE, SODIUM ION, Transporter Authors: Wang, H, Elferich, J, Gouaux, E. Deposit date: 2011-11-23 Release date: 2012-01-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (4.5 Å) Cite: Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol., 19, 2012
8CV3	Human Excitatory excitatory amino acid transporter 3 (EAAT3) protomer at in an intermediate outward facing sodium-bound state Descriptor: Excitatory amino acid transporter 3, SODIUM ION Authors: Qiu, B, Boudker, O. Deposit date: 2022-05-17 Release date: 2023-05-10 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.04 Å) Cite: Symport and antiport mechanisms of human glutamate transporters. Nat Commun, 14, 2023
8CV2	Human excitatory amino acid transporter 3 (EAAT3) in an outward facing sodium-bound state Descriptor: Excitatory amino acid transporter 3, SODIUM ION Authors: Qiu, B, Boudker, O. Deposit date: 2022-05-17 Release date: 2023-05-10 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (2.44 Å) Cite: Symport and antiport mechanisms of human glutamate transporters. Nat Commun, 14, 2023
5LLU	Structure of the thermostabilized EAAT1 cryst-II mutant in complex with L-ASP Descriptor: ASPARTIC ACID, Excitatory amino acid transporter 1,Neutral amino acid transporter B(0),Excitatory amino acid transporter 1, SODIUM ION Authors: Canul-Tec, J, Assal, R, Legrand, P, Reyes, N. Deposit date: 2016-07-28 Release date: 2017-04-19 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.32 Å) Cite: Structure and allosteric inhibition of excitatory amino acid transporter 1. Nature, 544, 2017
6GTO	Structure of the AtaR antitoxin Descriptor: DUF1778 domain-containing protein, SODIUM ION Authors: Garcia-Pino, A, Jurenas, D. Deposit date: 2018-06-18 Release date: 2019-03-06 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.97 Å) Cite: Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol., 15, 2019
8SZZ	CryoEM Structure of Computationally Designed Nanocage O32-ZL4 Descriptor: O32-ZL4 Component A, O32-ZL4 Component B, SODIUM ION Authors: Weidle, C, Borst, A. Deposit date: 2023-05-30 Release date: 2023-11-01 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
7UGX	Asp-bound GltPh RSMR mutant in IFS-B1 state Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION Authors: Huang, Y, Boudker, O. Deposit date: 2022-03-25 Release date: 2023-03-29 Last modified: 2023-05-10 Method: ELECTRON MICROSCOPY (2.96 Å) Cite: Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19 F NMR and Cryo-EM. J.Am.Chem.Soc., 145, 2023
7UH6	Asp-bound GltPh RSMR mutant in IFS-B2 state Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION Authors: Huang, Y, Boudker, O. Deposit date: 2022-03-25 Release date: 2023-03-29 Last modified: 2023-05-10 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM J.Am.Chem.Soc., 145, 2023
7UH3	Asp-bound GltPh RSMR mutant in iOFS state Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION Authors: Huang, Y, Boudker, O. Deposit date: 2022-03-25 Release date: 2023-03-29 Last modified: 2023-05-10 Method: ELECTRON MICROSCOPY (2.99 Å) Cite: Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM J.Am.Chem.Soc., 145, 2023
2WSY	CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE Descriptor: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, TRYPTOPHAN SYNTHASE Authors: Schneider, T.R, Gerhardt, E, Lee, M, Liang, P.-H, Anderson, K.S, Schlichting, I. Deposit date: 1998-02-18 Release date: 1999-03-30 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (3.05 Å) Cite: Loop closure and intersubunit communication in tryptophan synthase. Biochemistry, 37, 1998
5CD1	Structure of an asymmetric tetramer of human tRNA m1A58 methyltransferase in a complex with SAH and tRNA3Lys Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, ... Authors: Finer-Moore, J, Czudnochowski, N, O'Connell III, J.D, Wang, A.L, Stroud, R.M. Deposit date: 2015-07-02 Release date: 2015-11-04 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Crystal Structure of the Human tRNA m(1)A58 Methyltransferase-tRNA3(Lys) Complex: Refolding of Substrate tRNA Allows Access to the Methylation Target. J.Mol.Biol., 427, 2015
3E0Y	The crystal structure of a conserved domain from a protein of Geobacter sulfurreducens PCA Descriptor: Conserved domain protein, SODIUM ION Authors: Tan, K, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2008-08-01 Release date: 2008-09-30 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3.1 Å) Cite: The crystal structure of a conserved domain from a protein of Geobacter sulfurreducens PCA To be Published
3USJ	Crystal structure of LeuT bound to L-leucine in space group P21 from lipid bicelles Descriptor: LEUCINE, SODIUM ION, Transporter Authors: Wang, H, Elferich, J, Gouaux, E. Deposit date: 2011-11-23 Release date: 2012-01-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol., 19, 2012
3USO	Crystal structure of LeuT bound to L-selenomethionine in space group P21212 from lipid bicelles Descriptor: SELENOMETHIONINE, SODIUM ION, Transporter Authors: Wang, H, Elferich, J, Gouaux, E. Deposit date: 2011-11-23 Release date: 2012-01-11 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (4.5 Å) Cite: Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol., 19, 2012
8W6N	NaS1 with sulfate in IN/OUT state Descriptor: SODIUM ION, SULFATE ION, Solute carrier family 13 member 1 Authors: Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R. Deposit date: 2023-08-29 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism. Sci Adv, 10, 2024
6H3Z	Crystal structure of a C-terminal MIF4G domain in NOT1 Descriptor: CCR4-not transcription complex subunit 1, SODIUM ION Authors: Raisch, T, Sandmeir, F, Weichenrieder, O, Valkov, E, Izaurralde, E. Deposit date: 2018-07-19 Release date: 2018-11-07 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural and biochemical analysis of a NOT1 MIF4G-like domain of the CCR4-NOT complex. J. Struct. Biol., 204, 2018
6CSE	Crystal structure of sodium/alanine symporter AgcS with L-alanine bound Descriptor: ALANINE, Monoclonal antibody FAB heavy chain, Monoclonal antibody FAB light chain, ... Authors: Ma, J, Reyes, F.E, Gonen, T. Deposit date: 2018-03-20 Release date: 2019-01-30 Last modified: 2019-02-20 Method: X-RAY DIFFRACTION (3.24 Å) Cite: Structural basis for substrate binding and specificity of a sodium-alanine symporter AgcS. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6X01	Crystal structure of the GltPh V216C-A391C mutant cross-linked in outward-facing state Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION Authors: Chen, I, Font, J, Ryan, R. Deposit date: 2020-05-15 Release date: 2021-02-17 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.65 Å) Cite: Glutamate transporters have a chloride channel with two hydrophobic gates. Nature, 591, 2021
6D8G	D341A D367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2 Descriptor: Glycosyl hydrolases family 2, sugar binding domain protein, SODIUM ION Authors: Walton, W.G, Pellock, S.J, Redinbo, M.R. Deposit date: 2018-04-26 Release date: 2018-10-17 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3 Å) Cite: Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis. J. Biol. Chem., 293, 2018
6ZD2	Structure of apo telomerase from Candida Tropicalis truncated from C-terminal domain Descriptor: SODIUM ION, Telomerase reverse transcriptase Authors: Zhai, L, Rety, S, Chen, W.F, Auguin, D, Xi, X.G. Deposit date: 2020-06-13 Release date: 2021-04-28 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.84 Å) Cite: Crystal structures of N-terminally truncated telomerase reverse transcriptase from fungi‡. Nucleic Acids Res., 49, 2021
2WG4	Crystal structure of the complex between human hedgehog-interacting protein HIP and sonic hedgehog without calcium Descriptor: HEDGEHOG-INTERACTING PROTEIN, SODIUM ION, SONIC HEDGEHOG PROTEIN N-PRODUCT, ... Authors: Bishop, B, Aricescu, A.R, Harlos, K, O'Callaghan, C.A, Jones, E.Y, Siebold, C. Deposit date: 2009-04-15 Release date: 2009-06-30 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Structural Insights Into Hedgehog Ligand Sequestration by the Human Hedgehog-Interacting Protein Hip Nat.Struct.Mol.Biol., 16, 2009

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