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4BXE
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BU of 4bxe by Molmil
CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANHYDROMURAMIC PENTAPEPTIDE
Descriptor: ACETATE ION, AMPDH3, ANHYDROMURAMIC PEPTIDE, ...
Authors:Artola-Recolons, C, Hermoso, J.A.
Deposit date:2013-07-10
Release date:2013-10-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
6CCE
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BU of 6cce by Molmil
Crystal structure of a Mycobacterium smegmatis RNA polymerase transcription initiation complex with inhibitor Kanglemycin A
Descriptor: 1,2-ETHANEDIOL, DNA (57-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lilic, M, Darst, S.A, Campbell, E.A.
Deposit date:2018-02-07
Release date:2018-08-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Rifamycin congeners kanglemycins are active against rifampicin-resistant bacteria via a distinct mechanism.
Nat Commun, 9, 2018
4CP4
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BU of 4cp4 by Molmil
CRYSTAL STRUCTURE OF THE CYTOCHROME P450-CAM ACTIVE SITE MUTANT THR252ALA
Descriptor: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
Authors:Raag, R, Poulos, T.L.
Deposit date:1991-06-04
Release date:1993-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the cytochrome P-450CAM active site mutant Thr252Ala.
Biochemistry, 30, 1991
6DRT
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BU of 6drt by Molmil
Crystal structure of the processivity clamp GP45 complexed with recognition peptide of ligase from bacteriophage T4
Descriptor: 1,2-ETHANEDIOL, DNA polymerase clamp, GP45 recognition loop
Authors:Shi, K, Aihara, H.
Deposit date:2018-06-13
Release date:2018-09-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.117 Å)
Cite:T4 DNA ligase structure reveals a prototypical ATP-dependent ligase with a unique mode of sliding clamp interaction.
Nucleic Acids Res., 46, 2018
4BXD
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BU of 4bxd by Molmil
CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, AMPDH3, PEPTIDE, ...
Authors:Artola-Recolons, C, Hermoso, J.A.
Deposit date:2013-07-10
Release date:2013-10-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
5M61
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BU of 5m61 by Molmil
Clathrin heavy chain N-terminal domain bound to an extended amphiphysin clathrin-box motif
Descriptor: Amphiphysin, Clathrin heavy chain 1, GLYCEROL
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-23
Release date:2016-11-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5M5T
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BU of 5m5t by Molmil
Clathrin heavy chain N-terminal domain bound to a non-natural clathrin-box motif peptide (Amph4T1)
Descriptor: Amphiphysin, Clathrin heavy chain 1, GLYCEROL
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-22
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5M5S
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BU of 5m5s by Molmil
Clathrin heavy chain N-terminal domain bound to amphiphysin clathrin-box motif
Descriptor: Amphiphysin, Clathrin heavy chain 1, GLYCEROL
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-22
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
4BPA
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BU of 4bpa by Molmil
Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with NAG-NAM-NAG-NAM tetrasaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside, AMPDH2, ZINC ION
Authors:Artola-Recolons, C, Martinez-Caballero, S, Lee, M, Carrasco-Lopez, C, Hesek, D, Spink, E, Lastochkin, E, Zhang, W, Hellman, L, Boggess, B, Mobashery, S, Hermoso, J.A.
Deposit date:2013-05-23
Release date:2013-07-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Reaction Products and the X-Ray Structure of Ampdh2, a Virulence Determinant of Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
6B2W
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BU of 6b2w by Molmil
C. Jejuni C315S Agmatine Deiminase with Substrate Bound
Descriptor: AGMATINE, POTASSIUM ION, Putative peptidyl-arginine deiminase family protein
Authors:Shek, R, Hicks, K.A, French, J.B.
Deposit date:2017-09-20
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Functional Basis for Targeting Campylobacter jejuni Agmatine Deiminase To Overcome Antibiotic Resistance.
Biochemistry, 56, 2017
6B10
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BU of 6b10 by Molmil
C. Jejuni Agmatine Deiminase
Descriptor: PHOSPHATE ION, POTASSIUM ION, Putative peptidyl-arginine deiminase family protein
Authors:Shek, R, Hicks, K.A, French, J.B.
Deposit date:2017-09-15
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and Functional Basis for Targeting Campylobacter jejuni Agmatine Deiminase To Overcome Antibiotic Resistance.
Biochemistry, 56, 2017
7EVP
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BU of 7evp by Molmil
Cryo-EM structure of the Gp168-beta-clamp complex
Descriptor: Beta sliding clamp, Sliding clamp inhibitor
Authors:Liu, B, Li, S, Liu, Y, Chen, H, Hu, Z, Wang, Z, Gou, L, Zhang, L, Ma, B, Wang, H, Matthews, S, Wang, Y, Zhang, K.
Deposit date:2021-05-21
Release date:2022-02-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Bacteriophage Twort protein Gp168 is a beta-clamp inhibitor by occupying the DNA sliding channel.
Nucleic Acids Res., 49, 2021
6K4D
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BU of 6k4d by Molmil
Ancestral luciferase AncLamp in complex with ATP and D-luciferin
Descriptor: (4S)-2-(6-hydroxy-1,3-benzothiazol-2-yl)-4,5-dihydro-1,3-thiazole-4-carboxylic acid, Ancestral luciferase AncLamp, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (4S)-2-(6-oxidanyl-1,3-benzothiazol-2-yl)-4,5-dihydro-1,3-thiazole-4-carboxylate
Authors:Oba, Y, Konishi, K, Yano, D, Kato, D, Shirai, T.
Deposit date:2019-05-23
Release date:2020-05-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Resurrecting the ancient glow of the fireflies.
Sci Adv, 6, 2020
6K4C
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BU of 6k4c by Molmil
Ancestral luciferase AncLamp in complex with DLSA
Descriptor: 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE, Ancestral luciferase AncLamp, MAGNESIUM ION
Authors:Oba, Y, Konishi, K, Yano, D, Kato, D, Shirai, T.
Deposit date:2019-05-23
Release date:2020-05-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Resurrecting the ancient glow of the fireflies.
Sci Adv, 6, 2020
7U4B
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BU of 7u4b by Molmil
Ampicillin-CTX-M-15
Descriptor: (2S,4S)-2-[(1S)-1-{[(2S)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase, SULFATE ION
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-02-28
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022
2RNL
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BU of 2rnl by Molmil
Solution structure of the EGF-like domain from human Amphiregulin
Descriptor: Amphiregulin
Authors:Qin, X, Hayashi, F, Terada, T, Shirouzu, M, Watanabe, S, Kigawa, T, Yabuta, N, Nojima, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-01-11
Release date:2009-01-20
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the EGF-like domain from human Amphiregulin
To be Published
4WK3
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BU of 4wk3 by Molmil
Structure of Staphyloccus aureus PstA
Descriptor: CHLORIDE ION, PstA
Authors:Mueller, M, Hopfner, K.-P, Witte, G.
Deposit date:2014-10-01
Release date:2014-11-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:c-di-AMP recognition by Staphylococcus aureus PstA.
Febs Lett., 589, 2015
4RWW
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BU of 4rww by Molmil
Crystal Structure of L. monocytogenes PstA in complex with cyclic-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Lmo2692 protein
Authors:Choi, P.H, Tong, L.
Deposit date:2014-12-07
Release date:2014-12-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular basis for the recognition of cyclic-di-AMP by PstA, a PII -like signal transduction protein.
Microbiologyopen, 4, 2015
1YXI
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BU of 1yxi by Molmil
R-State AMP Complex Reveals Initial Steps of the Quaternary Transition of Fructose-1,6-bisphosphatase
Descriptor: 6-O-phosphono-beta-D-fructofuranose, Fructose-1,6-bisphosphatase, MAGNESIUM ION, ...
Authors:Iancu, C.V, Mukund, S, Fromm, H.J, Honzatko, R.B.
Deposit date:2005-02-21
Release date:2005-03-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:R-state AMP complex reveals initial steps of the quaternary transition of fructose-1,6-bisphosphatase.
J.Biol.Chem., 280, 2005
3T5A
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BU of 3t5a by Molmil
Crystal structure of N-terminal domain of FAAL28 G330W mutant from Mycobacterium tuberculosis
Descriptor: Long-chain-fatty-acid--AMP ligase FadD28
Authors:Goyal, A, Sankaranarayanan, R.
Deposit date:2011-07-27
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular basis of the functional divergence of fatty acyl-AMP ligase biosynthetic enzymes of Mycobacterium tuberculosis.
J.Mol.Biol., 416, 2012
1YDT
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BU of 1ydt by Molmil
STRUCTURE OF CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT IN COMPLEX WITH H89 PROTEIN KINASE INHIBITOR N-[2-(4-BROMOCINNAMYLAMINO)ETHYL]-5-ISOQUINOLINE
Descriptor: C-AMP-DEPENDENT PROTEIN KINASE, N-[2-(4-BROMOCINNAMYLAMINO)ETHYL]-5-ISOQUINOLINE SULFONAMIDE, PROTEIN KINASE INHIBITOR PEPTIDE
Authors:Engh, R.A, Girod, A, Kinzel, V, Huber, R, Bossemeyer, D.
Deposit date:1996-07-24
Release date:1997-04-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of catalytic subunit of cAMP-dependent protein kinase in complex with isoquinolinesulfonyl protein kinase inhibitors H7, H8, and H89. Structural implications for selectivity.
J.Biol.Chem., 271, 1996
5KQ8
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BU of 5kq8 by Molmil
PANK3-AMPPN complex
Descriptor: 1,2-ETHANEDIOL, AMP PHOSPHORAMIDATE, MAGNESIUM ION, ...
Authors:White, S.W, Yun, M.
Deposit date:2016-07-05
Release date:2016-08-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Allosteric Regulation of Mammalian Pantothenate Kinase.
J.Biol.Chem., 291, 2016
1YDS
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BU of 1yds by Molmil
Structure of CAMP-dependent protein kinase, alpha-catalytic subunit in complex with H8 protein kinase inhibitor [N-(2-methylamino)ethyl]-5-isoquinolinesulfonamide
Descriptor: C-AMP-DEPENDENT PROTEIN KINASE, N-[2-(METHYLAMINO)ETHYL]-5-ISOQUINOLINESULFONAMIDE, PROTEIN KINASE INHIBITOR PEPTIDE
Authors:Engh, R.A, Girod, A, Kinzel, V, Huber, R, Bossemeyer, D.
Deposit date:1996-07-24
Release date:1997-04-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of catalytic subunit of cAMP-dependent protein kinase in complex with isoquinolinesulfonyl protein kinase inhibitors H7, H8, and H89. Structural implications for selectivity.
J.Biol.Chem., 271, 1996
1YBF
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BU of 1ybf by Molmil
Crystal structure of AMP nucleosidase from Bacteroides thetaiotaomicron VPI-5482
Descriptor: AMP nucleosidase
Authors:Krishnamurthy, N.R, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-12-20
Release date:2005-01-04
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of AMP nucleosidase from Bacteroides thetaiotaomicron
To be published
4GA5
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BU of 4ga5 by Molmil
Crystal structure of AMP phosphorylase C-terminal deletion mutant in the apo-form
Descriptor: Putative thymidine phosphorylase
Authors:Nishitani, Y, Aono, R, Nakamura, A, Sato, T, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2012-07-25
Release date:2013-05-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure analysis of archaeal AMP phosphorylase reveals two unique modes of dimerization
J.Mol.Biol., 425, 2013

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