PDB: 19228 resultsInfo pagesStatus searchChemie searchBIRD

---

3L22	CRYSTAL STRUCTURE OF A SUSD SUPERFAMILY PROTEIN (BF_0597) FROM BACTEROIDES FRAGILIS AT 2.05 A RESOLUTION Descriptor: 1,2-ETHANEDIOL, ACETATE ION, SusD superfamily protein, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-12-14 Release date: 2010-01-12 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Crystal structure of SusD superfamily protein (YP_210307.1) from Bacteroides fragilis NCTC 9343 at 2.05 A resolution To be published
3L2J	Dimeric structure of the ligand-free extracellular domain of the human parathyroid hormone receptor (PTH1R) Descriptor: Fusion protein of Maltose-binding periplasmic protein and Parathyroid hormone/parathyroid hormone-related peptide receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose Authors: Pioszak, A.A, Xu, H.E. Deposit date: 2009-12-15 Release date: 2010-02-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.24 Å) Cite: Dimeric arrangement of the parathyroid hormone receptor and a structural mechanism for ligand-induced dissociation. J.Biol.Chem., 285, 2010
3KF0	HIV Protease with fragment 4D9 bound Descriptor: (1S,2S)-2-methylcyclohexanol, BETA-MERCAPTOETHANOL, DIMETHYL SULFOXIDE, ... Authors: Stout, C.D, Perryman, A.L. Deposit date: 2009-10-27 Release date: 2010-02-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Fragment-based screen against HIV protease. Chem.Biol.Drug Des., 75, 2010
3KFA	Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template Descriptor: 3-{(E)-2-[6-(cyclopropylamino)-9H-purin-9-yl]ethenyl}-4-methyl-N-[3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl]benzamide, Tyrosine-protein kinase ABL1 Authors: Zhou, T. Deposit date: 2009-10-27 Release date: 2009-12-22 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.22 Å) Cite: Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template. Chem.Biol.Drug Des., 75, 2010
3KFS	HIV Protease (PR) dimer with inhibitor TL-3 bound and fragment 2F4 in the outside/top of flap Descriptor: 1-benzothiophen-2-ylacetic acid, BETA-MERCAPTOETHANOL, DIMETHYL SULFOXIDE, ... Authors: Stout, C.D. Deposit date: 2009-10-28 Release date: 2010-02-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Fragment-based screen against HIV protease. Chem.Biol.Drug Des., 75, 2010
3KI4	Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-P Descriptor: (11bR)-3-oxo-1,2,3,11b-tetrahydrochromeno[4,3,2-de]isoquinoline-10-sulfonic acid, Cholix toxin, GLYCEROL Authors: Jorgensen, R, Edwards, P.R, Merrill, A.R. Deposit date: 2009-10-31 Release date: 2010-10-27 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae To be Published
8ANY	Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA Descriptor: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ... Authors: Singh, V, Itoh, Y, Amunts, A. Deposit date: 2022-08-06 Release date: 2023-08-16 Last modified: 2024-09-04 Method: ELECTRON MICROSCOPY (2.85 Å) Cite: Structural basis of LRPPRC-SLIRP-dependent translation by the mitoribosome. Nat.Struct.Mol.Biol., 2024
3KIZ	Crystal structure of Putative phosphoribosylformylglycinamidine cyclo-ligase (YP_676759.1) from CYTOPHAGA HUTCHINSONII ATCC 33406 at 1.50 A resolution Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Phosphoribosylformylglycinamidine cyclo-ligase Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-11-02 Release date: 2009-11-17 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of Putative phosphoribosylformylglycinamidine cyclo-ligase (YP_676759.1) from CYTOPHAGA HUTCHINSONII ATCC 33406 at 1.50 A resolution To be published
3KDU	Crystal structure of peroxisome proliferator-activatedeceptor alpha (PPARalpha) complex with N-3-((2-(4-Chlorophenyl)-5-methyl-1,3-oxazol-4-yl)methoxy)benzyl)-N-((4-methylphenoxy)carbonyl)glycine Descriptor: N-(3-{[2-(4-chlorophenyl)-5-methyl-1,3-oxazol-4-yl]methoxy}benzyl)-N-[(4-methylphenoxy)carbonyl]glycine, Peroxisome proliferator-activated receptor alpha Authors: Muckelbauer, J.K. Deposit date: 2009-10-23 Release date: 2010-04-28 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.07 Å) Cite: Discovery of an oxybenzylglycine based peroxisome proliferator activated receptor alpha selective agonist 2-((3-((2-(4-chlorophenyl)-5-methyloxazol-4-yl)methoxy)benzyl)(methoxycarbonyl)amino)acetic acid (BMS-687453). J.Med.Chem., 53, 2010
5J8A	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ... Authors: Cocozaki, A, Ferguson, A. Deposit date: 2016-04-07 Release date: 2016-07-06 Last modified: 2016-08-03 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors. Proc.Natl.Acad.Sci.USA, 113, 2016
3KEI	Crystal Structure of the GluA4 Ligand-Binding domain L651V mutant in complex with glutamate Descriptor: GLUTAMIC ACID, Glutamate receptor 4 Authors: Gill, A, Madden, D.R. Deposit date: 2009-10-26 Release date: 2010-02-09 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Enhanced efficacy without further cleft closure: reevaluating twist as a source of agonist efficacy in AMPA receptors. J.Neurosci., 30, 2010
5JFN	Crystal structure of Rhodopseudomonas palustris propionaldehyde dehydrogenase with bound CoA and acylated Cys330 Descriptor: Aldehyde dehydrogenase, COENZYME A, PENTAETHYLENE GLYCOL, ... Authors: Zarzycki, J, Sutter, M, Kerfeld, C.A. Deposit date: 2016-04-19 Release date: 2017-03-01 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.9 Å) Cite: In Vitro Characterization and Concerted Function of Three Core Enzymes of a Glycyl Radical Enzyme - Associated Bacterial Microcompartment. Sci Rep, 7, 2017
3KLB	Crystal structure of Putative Flavoprotein in Complex with FMN (YP_213683.1) from Bacteroides fragilis NCTC 9343 at 1.75 A resolution Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-11-07 Release date: 2010-01-26 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Crystal structure of Putative Flavoprotein in Complex with FMN (YP_213683.1) from Bacteroides fragilis NCTC 9343 at 1.75 A resolution To be published
3KF5	Structure of invertase from Schwanniomyces occidentalis Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Invertase Authors: Sanz-Aparicio, J, Polo, A. Deposit date: 2009-10-27 Release date: 2010-02-23 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural and kinetic analysis of Schwanniomyces occidentalis invertase reveals a new oligomerization pattern and the role of its supplementary domain in substrate binding J.Biol.Chem., 285, 2010
3KBZ	Crystal structure of human liver FBPase in complex with tricyclic inhibitor 6 Descriptor: Fructose-1,6-bisphosphatase 1, {[(2-amino-8H-indeno[1,2-d][1,3]thiazol-4-yl)oxy]methyl}phosphonic acid Authors: Takahashi, M, Sone, J, Hanzawa, H. Deposit date: 2009-10-20 Release date: 2010-02-02 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Structure-based drug design of tricyclic 8H-indeno[1,2-d][1,3]thiazoles as potent FBPase inhibitors. Bioorg.Med.Chem.Lett., 20, 2010
3KM5	Crystal Structure Analysis of the K2 Cleaved Adhesin Domain of Lys-gingipain (Kgp) Descriptor: CALCIUM ION, GLYCEROL, Lysine specific cysteine protease, ... Authors: Li, N, Collyer, C.A, Hunter, N. Deposit date: 2009-11-09 Release date: 2010-03-31 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structure determination and analysis of a haemolytic gingipain adhesin domain from Porphyromonas gingivalis Mol.Microbiol., 76, 2010
3KMG	The X-ray Crystal Structure of PPAR-gamma in Complex with an Indole Derivative Modulator, GSK538, and an SRC-1 Peptide Descriptor: 4'-[(2,3-dimethyl-5-{[(1S)-1-phenylpropyl]carbamoyl}-1H-indol-1-yl)methyl]biphenyl-2-carboxylic acid, Peroxisome proliferator-activated receptor gamma, Steroid Receptor Coactivator-1 Authors: Gampe, R. Deposit date: 2009-11-10 Release date: 2010-01-12 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Synthesis and biological activities of novel indole derivatives as potent and selective PPAR-gamma modulators TO BE PUBLISHED
8AEL	SYNJ2BP complex with a synthetic Vangl2 peptide (3mer). Descriptor: CALCIUM ION, GLY-GLY-GLY-THR-SER-VAL, GLYCEROL, ... Authors: Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G. Deposit date: 2022-07-13 Release date: 2023-08-16 Last modified: 2024-09-04 Method: X-RAY DIFFRACTION (2.2 Å) Cite: SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide. To Be Published
3KN7	Crystal Structure of Haemophilus influenzae Y195A mutant Holo Ferric ion-Binding Protein A Descriptor: FE (III) ION, Iron-utilization periplasmic protein, PHOSPHATE ION Authors: Shouldice, S.R, Schryvers, A.B. Deposit date: 2009-11-12 Release date: 2010-09-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.71 Å) Cite: The role of vicinal tyrosine residues in the function of Haemophilus influenzae ferric binding protein A. Biochem.J., 2010
3KDW	Crystal structure of Putative sugar binding protein (YP_001300177.1) from Bacteroides vulgatus ATCC 8482 at 1.70 A resolution Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-10-23 Release date: 2009-11-24 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of Putative sugar binding protein (YP_001300177.1) from Bacteroides vulgatus ATCC 8482 at 1.70 A resolution To be published
3KE5	Crystal structure of a PduO-Type ATP:Cob(I)alamin adenosyltransferase from Bacillus cereus in a complex with ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Hypothetical Cytosolic Protein, MAGNESIUM ION Authors: Park, A.K, Moon, J.H, Chi, Y.M. Deposit date: 2009-10-23 Release date: 2010-10-20 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of a PduO-Type ATP:Cob(I)alamin adenosyltransferase from Bacillus cereus in a complex with ATP To be Published
3KNC	Crystal structure of the CeNA-RNA hybrid octamer ce(GCGTAGCG):r(CGCUACGC) Descriptor: 5'-D(*(XGR)P*(XCR)P*(XGR)P*(XTR)P*(XAR)P*(XGR)P*(XCR)P*(XGR)P*(XGR))-3', 5'-R(*CP*GP*CP*UP*AP*CP*GP*C)-3', MAGNESIUM ION Authors: Ovaere, M, Van Meervelt, L. Deposit date: 2009-11-12 Release date: 2010-12-08 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.5 Å) Cite: The Crystal Structure of the CeNA:RNA Hybrid ce(GCGTAGCG):r(CGCUACGC). Chemistry, 17, 2011
3KNP	Crystal structure of DTD from Plasmodium falciparum Descriptor: D-tyrosyl-tRNA(Tyr) deacylase Authors: Manickam, Y, Bhatt, T.K, Sharma, A. Deposit date: 2009-11-12 Release date: 2009-12-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase J.Biol.Chem., 285, 2010
3KNZ	Crystal structure of Putative sugar binding protein (NP_459565.1) from Salmonella typhimurium LT2 at 2.50 A resolution Descriptor: 2-ETHOXYETHANOL, IMIDAZOLE, Putative sugar binding protein Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-11-12 Release date: 2009-12-01 Last modified: 2019-07-17 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structure of Putative sugar binding protein (NP_459565.1) from Salmonella typhimurium LT2 at 2.50 A resolution To be published
3KEZ	Crystal structure of Putative sugar binding protein (YP_001299726.1) from Bacteroides vulgatus ATCC 8482 at 1.90 A resolution Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, PHOSPHATE ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-10-26 Release date: 2009-11-10 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of Putative sugar binding protein (YP_001299726.1) from Bacteroides vulgatus ATCC 8482 at 1.90 A resolution To be published

<343344345346347348349350351352353354355356357358>