PDB: 2243 resultsInfo pagesStatus searchChemie searchBIRD

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3GPG	Crystal structure of macro domain of Chikungunya virus Descriptor: Non-structural protein 3 Authors: Malet, H, Jamal, S, Coutard, B, Canard, B. Deposit date: 2009-03-23 Release date: 2009-07-21 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.65 Å) Cite: The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket J.Virol., 83, 2009
3GPQ	Crystal structure of macro domain of Chikungunya virus in complex with RNA Descriptor: Non-structural protein 3, RNA (5'-R(*AP*AP*A)-3') Authors: Malet, H, Jamal, S, Coutard, B, Canard, B. Deposit date: 2009-03-23 Release date: 2009-07-21 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket J.Virol., 83, 2009
5ISN	NMR solution structure of macro domain from Venezuelan equine encephalitis virus Descriptor: Non-structural polyprotein Authors: Makrynitsa, G.I, Ntonti, D, Marousis, K.D, Tsika, A.C, Papageorgiou, N, Coutard, B, Bentrop, D, Spyroulias, G.A. Deposit date: 2016-03-15 Release date: 2017-11-29 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Conformational plasticity of the VEEV macro domain is important for binding of ADP-ribose. J.Struct.Biol., 206, 2019
3JZT	Structure of a cubic crystal form of X (ADRP) domain from FCoV with ADP-ribose Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CHLORIDE ION, SODIUM ION, ... Authors: Wojdyla, J.A, Manolaridis, I, Tucker, P.A. Deposit date: 2009-09-24 Release date: 2010-01-12 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3.91 Å) Cite: Structure of the X (ADRP) domain of nsp3 from feline coronavirus Acta Crystallogr.,Sect.D, 65, 2009
3EW5	Structure of the tetragonal crystal form of X (ADRP) domain from FCoV Descriptor: CHLORIDE ION, SN-GLYCEROL-1-PHOSPHATE, SULFATE ION, ... Authors: Wojdyla, J.A, Manolaridis, I, Tucker, P.A. Deposit date: 2008-10-14 Release date: 2009-10-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structure of the X (ADRP) domain of nsp3 from feline coronavirus Acta Crystallogr.,Sect.D, 65, 2009
3ETI	Structure of a cubic crystal form of X (ADRP) domain from FCoV Descriptor: macro domain of Non-structural protein 3 Authors: Wojdyla, J.A, Manolaridis, I, Tucker, P.A. Deposit date: 2008-10-08 Release date: 2009-10-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure of the X (ADRP) domain of nsp3 from feline coronavirus Acta Crystallogr.,Sect.D, 65, 2009
5W6F	Crystal structure of Bacteriophage CBA120 tailspike protein 3 (TSP3, orf212) Descriptor: CHLORIDE ION, tailspike protein 3 Authors: Plattner, M, Shneider, M.M, Leiman, P.G. Deposit date: 2017-06-16 Release date: 2018-10-24 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120. J.Mol.Biol., 431, 2019
6SP3	mouse Interleukin-12 subunit beta - p80 homodimer in space group P21 crystal form 1 Descriptor: CHLORIDE ION, Interleukin-12 subunit beta, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Bloch, Y, Savvides, S.N. Deposit date: 2019-08-30 Release date: 2020-09-09 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3 Å) Cite: Around she goes: the structure of mouse Interleukin-12 p80 To Be Published
8SP3	Asymmetric dimer of MapSPARTA bound with gRNA/tDNA hybrid Descriptor: MAGNESIUM ION, TIR-APAZ, guide RNA, ... Authors: Shen, Z.F, Yang, X.Y, Fu, T.M. Deposit date: 2023-05-01 Release date: 2023-08-23 Last modified: 2023-09-20 Method: ELECTRON MICROSCOPY (3.52 Å) Cite: Oligomerization-mediated activation of a short prokaryotic Argonaute. Nature, 621, 2023
3SP3	Lysozyme in 20% sucrose Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION, ... Authors: Sharma, P, Solanki, A.K, Ashish Deposit date: 2011-07-01 Release date: 2011-07-27 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.801 Å) Cite: Lysozyme in 20% sucrose to be published
1SP3	Crystal structure of octaheme cytochrome c from Shewanella oneidensis Descriptor: HEME C, THIOCYANATE ION, cytochrome c, ... Authors: Mowat, C.G, Rothery, E, Miles, C.S, McIver, L, Doherty, M.K, Drewette, K, Taylor, P, Walkinshaw, M.D, Chapman, S.K, Reid, G.A. Deposit date: 2004-03-16 Release date: 2004-09-21 Last modified: 2021-03-03 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Octaheme tetrathionate reductase is a respiratory enzyme with novel heme ligation. Nat.Struct.Mol.Biol., 11, 2004
7SP3	E. coli RppH bound to Ap4A Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, CHLORIDE ION, FLUORIDE ION, ... Authors: Serganov, A.A, Vasilyev, N, Nuthanakanti, A. Deposit date: 2021-11-02 Release date: 2022-03-09 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.6 Å) Cite: A distinct RNA recognition mechanism governs Np 4 decapping by RppH. Proc.Natl.Acad.Sci.USA, 119, 2022
3T6U	Crystal Structure of Lysozyme in 40% sucrose Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION, ... Authors: Sharma, P, Singh, S, Ashish Deposit date: 2011-07-29 Release date: 2011-08-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.213 Å) Cite: Crystal Structure of Lysozyme in 40% sucrose to be published
1RE1	CRYSTAL STRUCTURE OF CASPASE-3 WITH A NICOTINIC ACID ALDEHYDE INHIBITOR Descriptor: (3S)-3-{[(5-BROMOPYRIDIN-3-YL)CARBONYL]AMINO}-4-OXOBUTANOIC ACID, Caspase-3 Authors: Becker, J.W, Rotonda, J, Soisson, S.M. Deposit date: 2003-11-06 Release date: 2004-05-11 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Reducing the Peptidyl Features of Caspase-3 Inhibitors: A Structural Analysis J.Med.Chem., 47, 2004
1RHM	CRYSTAL STRUCTURE OF THE COMPLEX OF CASPASE-3 WITH A NICOTINIC ACID ALDEHYDE INHIBITOR Descriptor: 4-[5-(2-CARBOXY-1-FORMYL-ETHYLCARBAMOYL)-PYRIDIN-3-YL]-BENZOIC ACID, CASP-3 Authors: Becker, J.W, Rotonda, J, Soisson, S.M. Deposit date: 2003-11-14 Release date: 2004-05-11 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Reducing the Peptidyl Features of Caspase-3 Inhibitors: A Structural Analysis. J.Med.Chem., 47, 2004
1RHR	CRYSTAL STRUCTURE OF THE COMPLEX OF CASPASE-3 WITH A CINNAMIC ACID METHYL ESTER INHIBITOR Descriptor: (3S)-5-[(2-CHLORO-6-FLUOROBENZYL)SULFANYL]-3-{[N-({2-ETHOXY-5-[(1E)-3-METHOXY-3-OXOPROP-1-ENYL]PHENYL}ACETYL)-D-VALYL]AMINO}-4-OXOPENTANOIC ACID, Caspase-3 Authors: Becker, J.W, Rotonda, J, Soisson, S.M. Deposit date: 2003-11-14 Release date: 2004-05-11 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3 Å) Cite: Reducing the Peptidyl Features of Caspase-3 Inhibitors: A Structural Analysis. J.Med.Chem., 47, 2004
1RHJ	CRYSTAL STRUCTURE OF THE COMPLEX OF CASPASE-3 WITH A PRYAZINONE INHIBITOR Descriptor: 3-(2-{5-TERT-BUTYL-3-[(4-METHYL-FURAZAN-3-YLMETHYL)-AMINO]-2-OXO-2H-PYRAZIN-1-YL}-BUTYRYLAMINO)-5-(HEXYL-METHYL-AMINO)-4-OXO-PENTANOIC ACID ANION, Caspase-3 Authors: Becker, J.W, Rotonda, J, Soisson, S.M. Deposit date: 2003-11-14 Release date: 2004-05-11 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Reducing the Peptidyl Features of Caspase-3 Inhibitors: A Structural Analysis. J.Med.Chem., 47, 2004
6IEA	Structure of RVFV Gn and human monoclonal antibody R13 Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, NSmGnGc, ... Authors: Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F. Deposit date: 2018-09-13 Release date: 2019-04-10 Last modified: 2019-07-10 Method: X-RAY DIFFRACTION (2 Å) Cite: Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus. Nat Microbiol, 4, 2019
6IEB	Structure of RVFV Gn and human monoclonal antibody R15 Descriptor: NSmGnGc, R15 H chain, R15 L chain Authors: Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F. Deposit date: 2018-09-13 Release date: 2019-04-10 Last modified: 2019-07-10 Method: X-RAY DIFFRACTION (2.409 Å) Cite: Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus. Nat Microbiol, 4, 2019
6IEC	Structure of RVFV Gn and human monoclonal antibody R17 Descriptor: NSmGnGc, R17 H chain, R17 L chain Authors: Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F. Deposit date: 2018-09-13 Release date: 2019-04-10 Last modified: 2019-07-10 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus. Nat Microbiol, 4, 2019
6IEK	Structure of RVFV Gn and human monoclonal antibody R12 Descriptor: Heavy chain of Fab R12, Light chain of Fab R12, NSmGnGc Authors: Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F. Deposit date: 2018-09-14 Release date: 2019-04-10 Last modified: 2019-07-10 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus. Nat Microbiol, 4, 2019
6X8I	Caspase-3 in complex with ketomethylene inhibitor reveals tetrahedral adduct Descriptor: Caspase-3, ketomethylene inhibitor Authors: Solania, A, Xu, J.H, Wolan, D.W. Deposit date: 2020-06-01 Release date: 2021-06-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Caspase-3 in complex with ketomethylene inhibitor reveals tetrahedral adduct To Be Published
6X8K	Caspase-3 in complex with elongated ketomethylene inhibitor Descriptor: Caspase-3, ketomethylene inhibitor Authors: Solania, A, Xu, J.H, Wolan, D.W. Deposit date: 2020-06-01 Release date: 2021-06-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.17 Å) Cite: Caspase-3 in complex with elongated ketomethylene inhibitor To Be Published
5IBP	Caspase 3 V266M Descriptor: ACE-ASP-GLU-VAL-ASK, AZIDE ION, Caspase-3 Authors: Maciag, J.J, Mackenzie, S.H, Tucker, M.B, Schipper, J.L, Swartz, P.D, Clark, A.C. Deposit date: 2016-02-22 Release date: 2016-10-26 Method: X-RAY DIFFRACTION (1.38 Å) Cite: Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA, 113, 2016
5I9B	Caspase 3 V266A Descriptor: ACE-ASP-GLU-VAL-ASK, Caspase-3, SODIUM ION Authors: Maciag, J.J, Mackenzie, S.H, Tucker, M.B, Schipper, J.L, Swartz, P.D, Clark, A.C. Deposit date: 2016-02-19 Release date: 2016-10-26 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA, 113, 2016

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