Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MQW
DownloadVisualize
BU of 4mqw by Molmil
Structure of follicle-stimulating hormone in complex with the entire ectodomain of its receptor (P31)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Follicle-stimulating hormone receptor, ...
Authors:Jiang, X, Liu, H, Chen, X, He, X.
Deposit date:2013-09-16
Release date:2014-04-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Evidence for Follicle-stimulating Hormone Receptor as a Functional Trimer.
J.Biol.Chem., 289, 2014
4KCC
DownloadVisualize
BU of 4kcc by Molmil
Crystal Structure of the NMDA Receptor GluN1 Ligand Binding Domain Apo State
Descriptor: Glutamate receptor ionotropic, NMDA 1, PHOSPHATE ION
Authors:Berger, A.J, Lau, A.Y, Mayer, M.L.
Deposit date:2013-04-24
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.894 Å)
Cite:Conformational Analysis of NMDA Receptor GluN1, GluN2, and GluN3 Ligand-Binding Domains Reveals Subtype-Specific Characteristics.
Structure, 21, 2013
2VBD
DownloadVisualize
BU of 2vbd by Molmil
Isopenicillin N synthase with substrate analogue L,L,L-ACOMP (unexposed)
Descriptor: FE (II) ION, ISOPENICILLIN N SYNTHETASE, N^6^-[(1R)-2-[(1R)-1-carboxy-2-(methylsulfanyl)ethoxy]-2-oxo-1-(sulfanylmethyl)ethyl]-6-oxo-L-lysine
Authors:Ge, W, Clifton, I.J, Adlington, R.M, Baldwin, J.E, Rutledge, P.J.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of an Lll-Configured Depsipeptide Substrate Analogue Bound to Isopenicillin N Synthase.
Org.Biomol.Chem., 8, 2010
2VG9
DownloadVisualize
BU of 2vg9 by Molmil
Crystal structure of Loop Swap mutant of Necallimastix patriciarum Xyn11A
Descriptor: ACETATE ION, BIFUNCTIONAL ENDO-1,4-BETA-XYLANASE A, CADMIUM ION
Authors:Vardakou, M, Dumon, C, Flint, J.E, Murray, J.W, Christakopoulos, P, Weiner, D.P, Juge, N, Lewis, R.J, Gilbert, H.J.
Deposit date:2007-11-09
Release date:2007-12-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the Structural Basis for Substrate and Inhibitor Recognition in Eukaryotic Gh11 Xylanases.
J.Mol.Biol., 375, 2008
2V6O
DownloadVisualize
BU of 2v6o by Molmil
Structure of Schistosoma mansoni Thioredoxin-Glutathione Reductase (SmTGR)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NITRATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Miele, A.E, Angelucci, F, Boumis, G, Dimastrogiovanni, D, Bellelli, A, Brunori, M.
Deposit date:2007-07-19
Release date:2008-03-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Glutathione Reductase and Thioredoxin Reductase at the Crossroad: The Structure of Schistosoma Mansoni Thioredoxin Glutathione Reductase
Proteins, 72, 2008
4HR6
DownloadVisualize
BU of 4hr6 by Molmil
Crystal structure of snake gourd (Trichosanthes anguina) seed lectin, a three chain homologue of type II RIPs
Descriptor: LECTIN, methyl alpha-D-galactopyranoside
Authors:Sharma, A, Pohlentz, G, Bobbili, K.B, Jeyaprakash, A.A, Chandran, T, Mormann, M, Swamy, M.J, Vijayan, M.
Deposit date:2012-10-26
Release date:2013-08-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The sequence and structure of snake gourd (Trichosanthes anguina) seed lectin, a three-chain nontoxic homologue of type II RIPs.
Acta Crystallogr.,Sect.D, 69, 2013
4HTK
DownloadVisualize
BU of 4htk by Molmil
Mitigation of X-ray damage in macromolecular crystallography by submicrometer line focusing; total dose 2.17 x 10e+12 X-ray photons
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Duke, N.E.C, Finfrock, Y.Z, Stern, E.A, Alkire, R.W, Lazarski, K, Joachimiak, A.
Deposit date:2012-11-01
Release date:2013-05-15
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Mitigation of X-ray damage in macromolecular crystallography by submicrometre line focusing.
Acta Crystallogr.,Sect.D, 69, 2013
4N7O
DownloadVisualize
BU of 4n7o by Molmil
Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of half-liganded human haemoglobin with phosphate at 2.5 A resolution.
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sugiyama, K, Shibayama, N, Park, S.Y.
Deposit date:2013-10-16
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Capturing the hemoglobin allosteric transition in a single crystal form
J.Am.Chem.Soc., 136, 2014
3ZNV
DownloadVisualize
BU of 3znv by Molmil
Crystal structure of the OTU domain of OTULIN at 1.3 Angstroms.
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Keusekotten, K, Elliott, P.R, Glockner, L, Kulathu, Y, Wauer, T, Krappmann, D, Hofmann, K, Komander, D.
Deposit date:2013-02-18
Release date:2013-06-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Otulin Antagonizes Lubac Signaling by Specifically Hydrolyzing met1-Linked Polyubiquitin.
Cell(Cambridge,Mass.), 153, 2013
4OQU
DownloadVisualize
BU of 4oqu by Molmil
Structure of the SAM-I/IV riboswitch (env87(deltaU92))
Descriptor: MAGNESIUM ION, S-ADENOSYLMETHIONINE, SAM-I/IV riboswitch
Authors:Trausch, J.J, Reyes, F.E, Edwards, A.L, Batey, R.T.
Deposit date:2014-02-10
Release date:2014-06-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for diversity in the SAM clan of riboswitches.
Proc.Natl.Acad.Sci.USA, 111, 2014
4KF3
DownloadVisualize
BU of 4kf3 by Molmil
Crystal Structure of Myotoxin II (MjTX-II), a myotoxic Lys49-phospholipase A2 from Bothrops moojeni.
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Basic phospholipase A2 homolog 2, ISOPROPYL ALCOHOL
Authors:Salvador, G.H.M, dos Santos, J.I, Fontes, M.R.M.
Deposit date:2013-04-26
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like.
Toxicon, 72C, 2013
4JMH
DownloadVisualize
BU of 4jmh by Molmil
Crystal structure of synthetic protein in complex with double pY peptide
Descriptor: Clamp Shc1_pY239/240, SHC-transforming protein 1
Authors:Yasui, N, Smith, L, Koide, S.
Deposit date:2013-03-14
Release date:2014-04-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.408 Å)
Cite:Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation.
Mol.Cell, 54, 2014
4JRU
DownloadVisualize
BU of 4jru by Molmil
Structure of haze forming proteins in white wines: Vitis vinifera thaumatin-like proteins
Descriptor: GLYCEROL, thaumatin-like protein
Authors:Marangon, M, Menz, R.I, Waters, E.J, Van Sluyter, S.C.
Deposit date:2013-03-22
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of Haze Forming Proteins in White Wines: Vitis vinifera Thaumatin-Like Proteins.
Plos One, 9, 2014
4KTC
DownloadVisualize
BU of 4ktc by Molmil
NS3/NS4A protease with inhibitor
Descriptor: (2R,6S,13aR,14aR,16aS)-6-{[(cyclopentyloxy)carbonyl]amino}-14a-[(cyclopropylsulfonyl)carbamoyl]-5,16-dioxooctadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-2-yl 3,4-dihydroisoquinoline-2(1H)-carboxylate, NS4A peptide, Serine protease NS3, ...
Authors:Zhang, H, Ballard, J, Vigers, G.P.A, Brandhuber, B.J.
Deposit date:2013-05-20
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of Danoprevir (ITMN-191/R7227), a Highly Selective and Potent Inhibitor of Hepatitis C Virus (HCV) NS3/4A Protease.
J.Med.Chem., 57, 2014
8JLA
DownloadVisualize
BU of 8jla by Molmil
Cryo-EM structure of the human nucleosome lacking N-terminal region of H2A, H2B, H3, and H4
Descriptor: DNA (193-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Oishi, T, Hatazawa, S, Kujirai, T, Kato, J, Kobayashi, Y, Ogasawara, M, Akatsu, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-06-02
Release date:2023-10-04
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Contributions of histone tail clipping and acetylation in nucleosome transcription by RNA polymerase II.
Nucleic Acids Res., 51, 2023
1JLL
DownloadVisualize
BU of 1jll by Molmil
Crystal Structure Analysis of the E197betaA Mutant of E. coli SCS
Descriptor: COENZYME A, PHOSPHATE ION, SULFATE ION, ...
Authors:Fraser, M.E.
Deposit date:2001-07-16
Release date:2002-01-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Two glutamate residues, Glu 208 alpha and Glu 197 beta, are crucial for phosphorylation and dephosphorylation of the active-site histidine residue in succinyl-CoA synthetase.
Biochemistry, 41, 2002
7WGI
DownloadVisualize
BU of 7wgi by Molmil
Crystal structure of AflSQS from Aspergillus flavus
Descriptor: INDOLE, PHOSPHATE ION, Squalene synthase
Authors:Shang, N, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2021-12-28
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Structural and Bioinformatics Investigation of a Fungal Squalene Synthase and Comparisons with Other Membrane Proteins.
Acs Omega, 7, 2022
7WGH
DownloadVisualize
BU of 7wgh by Molmil
Crystal structure of AflSQS from Aspergillus flavus in complex with FSPP
Descriptor: PHOSPHATE ION, PYROPHOSPHATE 2-, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE, ...
Authors:Shang, N, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2021-12-28
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:A Structural and Bioinformatics Investigation of a Fungal Squalene Synthase and Comparisons with Other Membrane Proteins.
Acs Omega, 7, 2022
7F8J
DownloadVisualize
BU of 7f8j by Molmil
Cryo-EM structure of human pannexin-1 in a nanodisc
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1
Authors:Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
Deposit date:2021-07-02
Release date:2022-01-26
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
7F8O
DownloadVisualize
BU of 7f8o by Molmil
Cryo-EM structure of the C-terminal deletion mutant of human PANX1 in a nanodisc
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1
Authors:Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
Deposit date:2021-07-02
Release date:2022-01-26
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
7WNB
DownloadVisualize
BU of 7wnb by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
Authors:Yamamoto, A, Higashiura, A.
Deposit date:2022-01-18
Release date:2023-04-19
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
3O21
DownloadVisualize
BU of 3o21 by Molmil
High resolution structure of GluA3 N-terminal domain (NTD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 3, PHOSPHATE ION
Authors:Rossmann, M, Sukumaran, M, Penn, A.C, Veprintsev, D.B, Babu, M.M, Jensen, M.H, Greger, I.H.
Deposit date:2010-07-22
Release date:2011-03-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Dynamics and allosteric potential of the AMPA receptor N-terminal domain
Embo J., 30, 2011
6YOS
DownloadVisualize
BU of 6yos by Molmil
Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pT524 pS617 peptide
Descriptor: 14-3-3 protein zeta/delta, Glucocorticoid receptor,Glucocorticoid receptor
Authors:Munier, C.C, Edman, K, Perry, M.W.D, Ottmann, C.
Deposit date:2020-04-15
Release date:2021-03-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Glucocorticoid receptor Thr524 phosphorylation by MINK1 induces interactions with 14-3-3 protein regulators.
J.Biol.Chem., 296, 2021
6YO8
DownloadVisualize
BU of 6yo8 by Molmil
Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pT524 peptide
Descriptor: 14-3-3 protein zeta/delta, Glucocorticoid receptor
Authors:Munier, C.C, Edman, K, Perry, M.W.D, Ottmann, C.
Deposit date:2020-04-14
Release date:2021-03-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Glucocorticoid receptor Thr524 phosphorylation by MINK1 induces interactions with 14-3-3 protein regulators.
J.Biol.Chem., 296, 2021
6YHY
DownloadVisualize
BU of 6yhy by Molmil
A lid blocking mechanism of a cone snail toxin revealed at the atomic level
Descriptor: Conk-S1
Authors:Saikia, C, Altman-Gueta, H, Dym, O, Frolow, F, Gurevitz, M, Gordon, D, Reuveny, E, Karbat, I.
Deposit date:2020-03-31
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A Molecular Lid Mechanism of K + Channel Blocker Action Revealed by a Cone Peptide.
J.Mol.Biol., 433, 2021

225399

건을2024-09-25부터공개중

PDB statisticsPDBj update infoContact PDBjnumon