Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3CSD
DownloadVisualize
BU of 3csd by Molmil
Actinorhodin Polyketide Ketoreductase Mutant P94L bound to NADPH and the Inhibitor Emodin
Descriptor: 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative ketoacyl reductase
Authors:Javidpour, P.
Deposit date:2008-04-09
Release date:2009-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Actinorhodin Polyketide Ketoreductase Mutant P94L bound to NADPH and the Inhibitor Emodin
To be Published
6JPD
DownloadVisualize
BU of 6jpd by Molmil
Mouse receptor-interacting protein kinase 3 (RIP3) amyloid structure by solid-state NMR
Descriptor: Receptor-interacting serine/threonine-protein kinase 3
Authors:Wu, X.L, Hu, H, Zhang, J, Dong, X.Q, Wang, J, Schwieters, C, Wang, H.Y, Lu, J.X.
Deposit date:2019-03-26
Release date:2020-10-28
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:The amyloid structure of mouse RIPK3 (receptor interacting protein kinase 3) in cell necroptosis.
Nat Commun, 12, 2021
4GEJ
DownloadVisualize
BU of 4gej by Molmil
N-terminal domain of VDUP-1
Descriptor: CALCIUM ION, Thioredoxin-interacting protein
Authors:Polekhina, G, Kok, S.F, Ascher, D.B, Waltham, M.
Deposit date:2012-08-02
Release date:2013-02-27
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the N-terminal domain of human thioredoxin-interacting protein.
Acta Crystallogr.,Sect.D, 69, 2013
2DWG
DownloadVisualize
BU of 2dwg by Molmil
RUN domain of Rap2 interacting protein x, crystallized in P2(1)2(1)2(1) space group
Descriptor: Protein RUFY3
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-11
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Crystal Structure of the RUN Domain of the RAP2-interacting Protein x
J.Biol.Chem., 281, 2006
2KE4
DownloadVisualize
BU of 2ke4 by Molmil
The NMR structure of the TC10 and Cdc42 interacting domain of CIP4
Descriptor: Cdc42-interacting protein 4
Authors:Kumeta, H, Kanoh, D, Kobashigawa, Y, Inagaki, F.
Deposit date:2009-01-22
Release date:2009-03-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The NMR structure of the TC10- and Cdc42-interacting domain of CIP4.
J.Biomol.Nmr, 44, 2009
2DWK
DownloadVisualize
BU of 2dwk by Molmil
Crystal structure of the RUN domain of mouse Rap2 interacting protein x
Descriptor: Protein RUFY3
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-15
Release date:2006-08-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the RUN Domain of the RAP2-interacting Protein x
J.Biol.Chem., 281, 2006
6OQP
DownloadVisualize
BU of 6oqp by Molmil
U-AITx-Ate1
Descriptor: SER-LYS-TRP-ILE-CYS-ALA-ASN-ARG-SER-VAL-CYS-PRO-ILE
Authors:Elnahriry, K.A, Wai, D.C.C, Norton, R.S.
Deposit date:2019-04-28
Release date:2019-07-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and functional characterisation of a novel peptide from the Australian sea anemone Actinia tenebrosa.
Toxicon, 168, 2019
7AV8
DownloadVisualize
BU of 7av8 by Molmil
Crystal Structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group P21212
Descriptor: PH-interacting protein
Authors:Krojer, T, Talon, R, Fairhead, M, Szykowska, A, Burgess-Brown, N.A, Brennan, P.E, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2020-11-04
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal Structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group P21212
To Be Published
3QWE
DownloadVisualize
BU of 3qwe by Molmil
Crystal structure of the N-terminal domain of the GEM interacting protein
Descriptor: GEM-interacting protein, UNKNOWN ATOM OR ION
Authors:Guan, X, Tempel, W, Tong, Y, Shen, L, Wang, H, Wernimont, A.K, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2011-02-28
Release date:2011-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the N-terminal domain of the GEM interacting protein
to be published
4U10
DownloadVisualize
BU of 4u10 by Molmil
Probing the structure and mechanism of de-N-acetylase from aggregatibacter actinomycetemcomitans
Descriptor: CHLORIDE ION, Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase, ZINC ION
Authors:Varudharasu, D, Narayanan, R.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Probing the structure and mechanism of de-N-acetylase from aggregatibacter actinomycetemcomitans
To Be Published
7MRS
DownloadVisualize
BU of 7mrs by Molmil
Zebrafish CNTN4 APPb complex
Descriptor: Amyloid-beta A4 protein, Contactin-4
Authors:Bouyain, S, Karuppan, S.J.
Deposit date:2021-05-09
Release date:2022-01-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Members of the vertebrate contactin and amyloid precursor protein families interact through a conserved interface.
J.Biol.Chem., 298, 2021
4DUK
DownloadVisualize
BU of 4duk by Molmil
Carboxypeptidase T with L-BENZYLSUCCINIC ACID
Descriptor: CALCIUM ION, Carboxypeptidase T, GLYCEROL, ...
Authors:Kuznetsov, S.A, Timofeev, V.I, Akparov, V.K, Kuranova, I.P.
Deposit date:2012-02-22
Release date:2013-02-27
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural insights into the broad substrate specificity of carboxypeptidase T from Thermoactinomyces vulgaris.
Febs J., 282, 2015
7MRK
DownloadVisualize
BU of 7mrk by Molmil
Chicken CNTN4 APP complex
Descriptor: Amyloid-beta A4 protein, Contactin-4, DI(HYDROXYETHYL)ETHER
Authors:Bouyain, S, Karuppan, S.J.
Deposit date:2021-05-07
Release date:2022-01-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Members of the vertebrate contactin and amyloid precursor protein families interact through a conserved interface.
J.Biol.Chem., 298, 2021
173D
DownloadVisualize
BU of 173d by Molmil
MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
Authors:Kamitori, S, Takusagawa, F.
Deposit date:1994-04-18
Release date:1994-10-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Multiple Binding Modes of Anticancer Drug Actinomycin D: X-Ray, Molecular Modeling, and Spectroscopic Studies of D(Gaagcttc)2-Actinomycin D Complexes and its Host DNA
J.Am.Chem.Soc., 116, 1994
1DSD
DownloadVisualize
BU of 1dsd by Molmil
NMR STUDY OF DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3') T:T MISMATCHED DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3')
Authors:Lian, C, Robinson, H, Wang, A.H.-J.
Deposit date:1996-08-10
Release date:1996-12-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structure of Actinomycin D Bound with (Gaagcttc)2 and (Gatgcttc)2 and its Binding to the (Cag)N:(Ctg)N Triplet Sequence by NMR Analysis
J.Am.Chem.Soc., 118, 1996
1DSC
DownloadVisualize
BU of 1dsc by Molmil
NMR STUDY OF DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
Authors:Lian, C, Robinson, H, Wang, A.H.-J.
Deposit date:1996-08-10
Release date:1996-12-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structure of Actinomycin D Bound with (Gaagcttc)2 and (Gatgcttc)2 and its Binding to the (Cag)N:(Ctg)N Triplet Sequence by NMR Analysis
J.Am.Chem.Soc., 118, 1996
6K2G
DownloadVisualize
BU of 6k2g by Molmil
Structure of FraE in the monomer state
Descriptor: FraE
Authors:Caaveiro, J.M.M, Morante, K, Tsumoto, K.
Deposit date:2019-05-14
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The Isolation of New Pore-Forming Toxins from the Sea AnemoneActinia fragaceaProvides Insights into the Mechanisms of Actinoporin Evolution.
Toxins, 11, 2019
4XGT
DownloadVisualize
BU of 4xgt by Molmil
Structure of RNA Helicase FRH a Critical Component of the Neurospora Crassa Circadian Clock
Descriptor: FRQ-interacting RNA helicase
Authors:Conrad, K.S, Crane, B.C.
Deposit date:2015-01-02
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock.
Embo J., 35, 2016
5GWF
DownloadVisualize
BU of 5gwf by Molmil
FraC with GlcNAc(6S) bound
Descriptor: 2-acetamido-2-deoxy-6-O-sulfo-alpha-D-glucopyranose, CHLORIDE ION, DELTA-actitoxin-Afr1a, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2016-09-11
Release date:2017-06-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Haemolytic actinoporins interact with carbohydrates using their lipid-binding module
Philos. Trans. R. Soc. Lond., B, Biol. Sci., 372, 2017
4N68
DownloadVisualize
BU of 4n68 by Molmil
Crystal structure of an internal FN3 domain from human Contactin-5 [PSI-NYSGRC-005804]
Descriptor: Contactin-5, SULFATE ION
Authors:Kumar, P.R, Banu, R, Bhosle, R, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S.J, Glenn, A.S, Hillerich, B, Khafizov, K, Attonito, J, Love, J.D, Patel, H, Patel, R, Seidel, R.D, Smith, B, Stead, M, Toro, R, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2013-10-11
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of an internal FN3 domain from human Contactin-5 [PSI-NYSGRC-005804]
to be published
5UGZ
DownloadVisualize
BU of 5ugz by Molmil
Crystal structure of ClbQ from the colibactin NRPS/PKS pathway
Descriptor: BETA-MERCAPTOETHANOL, Putative thioesterase
Authors:Guntaka, N.S, Bruner, S.D.
Deposit date:2017-01-10
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.983 Å)
Cite:Structure and Functional Analysis of ClbQ, an Unusual Intermediate-Releasing Thioesterase from the Colibactin Biosynthetic Pathway.
ACS Chem. Biol., 12, 2017
5AA5
DownloadVisualize
BU of 5aa5 by Molmil
Actinobacterial-type NiFe-hydrogenase from Ralstonia eutropha H16 at 2.85 Angstrom resolution
Descriptor: IRON/SULFUR CLUSTER, MALONIC ACID, NIFE-HYDROGENASE LARGE SUBUNIT, ...
Authors:Schaefer, C, Bommer, M, Hennig, S, Jeoung, J.H, Dobbek, H, Lenz, O.
Deposit date:2015-07-23
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Structure of an Actinobacterial-Type [Nife]-Hydrogenase Reveals Insight Into O2-Tolerant H2 Oxidation.
Structure, 24, 2016
1WGL
DownloadVisualize
BU of 1wgl by Molmil
Solution Structure of CUE domain in the C-terminal of Human Toll-interacting Protein (Tollip)
Descriptor: Toll-interacting protein
Authors:Zhao, C, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of CUE domain in the C-terminal of Human Toll-interacting Protein (Tollip)
To be Published
4MJG
DownloadVisualize
BU of 4mjg by Molmil
Crystal structure of a DUF4853 family protein (ACTODO_00621) from Actinomyces odontolyticus ATCC 17982 at 2.65 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-09-03
Release date:2013-10-16
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of a hypothetical protein (ACTODO_00621) from Actinomyces odontolyticus ATCC 17982 at 2.65 A resolution
To be published
1G2A
DownloadVisualize
BU of 1g2a by Molmil
THE CRYSTAL STRUCTURE OF E.COLI PEPTIDE DEFORMYLASE COMPLEXED WITH ACTINONIN
Descriptor: ACTINONIN, NICKEL (II) ION, POLYPEPTIDE DEFORMYLASE
Authors:Clements, J.M, Beckett, P, Brown, A, Catlin, C, Lobell, M, Palan, S, Thomas, W, Whittaker, M, Baker, P.J, Rodgers, H.F, Barynin, V, Rice, D.W, Hunter, M.G.
Deposit date:2000-10-18
Release date:2001-10-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Antibiotic activity and characterization of BB-3497, a novel peptide deformylase inhibitor.
Antimicrob.Agents Chemother., 45, 2001

222036

건을2024-07-03부터공개중

PDB statisticsPDBj update infoContact PDBjnumon