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3PZM
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BU of 3pzm by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with three glycerol molecules
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
5YCE
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BU of 5yce by Molmil
Sperm whale myoglobin swMb
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Nakagawa, T, Tsuneshige, A, Shirai, T.
Deposit date:2017-09-07
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.77 Å)
Cite:Tracing whale myoglobin evolution by resurrecting ancient proteins.
Sci Rep, 8, 2018
3PZN
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BU of 3pzn by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with citrate and glycerol
Descriptor: CITRIC ACID, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
5YCJ
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BU of 5ycj by Molmil
Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly) imidazole-ligand
Descriptor: Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly), IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Nakagawa, T, Tsuneshige, A, Shirai, T.
Deposit date:2017-09-07
Release date:2018-09-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Tracing whale myoglobin evolution by resurrecting ancient proteins.
Sci Rep, 8, 2018
4YNP
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BU of 4ynp by Molmil
ASH1L SET domain S2259M mutant in complex with S-adenosyl methionine (SAM)
Descriptor: Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ZINC ION
Authors:Rogawski, D.S, Ndoj, J, Cho, H.-J, Maillard, I, Grembecka, J, Cierpicki, T.
Deposit date:2015-03-10
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.
Biochemistry, 54, 2015
5W99
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BU of 5w99 by Molmil
Pyridine synthase, PbtD, from GE2270 biosynthesis bound to TSP
Descriptor: 2,2'-(6-(2'-(aminomethyl)-[2,4'-bithiazol]-4-yl)pyridine-2,5-diyl)bis(thiazole-4-carboxylic acid), PbtD, SULFATE ION
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2017-06-22
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3R12
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BU of 3r12 by Molmil
Crystal structure of a Deoxyribose-phosphate aldolase (TM_1559) from THERMOTOGA MARITIMA at 1.75 A resolution
Descriptor: CITRIC ACID, Deoxyribose-phosphate aldolase, GLYCEROL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-03-09
Release date:2011-04-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a Deoxyribose-phosphate aldolase (TM_1559) from THERMOTOGA MARITIMA at 1.75 A resolution
To be published
3PZG
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BU of 3pzg by Molmil
I222 crystal form of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, ...
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
1S12
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BU of 1s12 by Molmil
Crystal structure of TM1457
Descriptor: ACETATE ION, hypothetical protein TM1457
Authors:Shin, D.H, Lou, Y, Jancarik, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-05
Release date:2004-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of TM1457 from Thermotoga maritima.
J.Struct.Biol., 152, 2005
3PZQ
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BU of 3pzq by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with maltose and glycerol
Descriptor: Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
2N5K
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BU of 2n5k by Molmil
Regnase-1 Zinc finger domain
Descriptor: Ribonuclease ZC3H12A, ZINC ION
Authors:Yokogawa, M, Tsushima, T, Noda, N.N, Kumeta, H, Adachi, W, Enokizono, Y, Yamashita, K, Standley, D.M, Takeuchi, O, Akira, S, Inagaki, F.
Deposit date:2015-07-18
Release date:2016-03-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016
4YNH
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BU of 4ynh by Molmil
Structure of the C. elegans SAS-5 Implico dimerization domain
Descriptor: Spindle assembly abnormal protein 5
Authors:Rogala, K.B, Vakonakis, I, Hatzopoulos, G.N.
Deposit date:2015-03-10
Release date:2015-06-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:The Caenorhabditis elegans protein SAS-5 forms large oligomeric assemblies critical for centriole formation.
Elife, 4, 2015
4YPU
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BU of 4ypu by Molmil
ASH1L SET domain K2264L mutant in complex with S-adenosyl methionine (SAM)
Descriptor: Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ZINC ION
Authors:Rogawski, D.S, Ndoj, J, Cho, H.J, Maillard, I, Grembecka, J, Cierpicki, T.
Deposit date:2015-03-13
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.
Biochemistry, 54, 2015
5XJA
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BU of 5xja by Molmil
The Crystal Structure of the Minimal Core Domain of the Microtubule Depolymerizer KIF2C Complexed with ADP-Mg-AlFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Kinesin-like protein KIF2C, ...
Authors:Ogawa, T, Jiang, X, Hirokawa, N.
Deposit date:2017-04-30
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:Mechanism of Catalytic Microtubule Depolymerization via KIF2-Tubulin Transitional Conformation
Cell Rep, 20, 2017
4YV4
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BU of 4yv4 by Molmil
Structure of the C. elegans SAS-5 coiled coil domain
Descriptor: PHOSPHATE ION, SULFATE ION, Spindle assembly abnormal protein 5
Authors:Rogala, K.B, Hatzopoulos, G.N, Vakonakis, I.
Deposit date:2015-03-19
Release date:2015-06-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Caenorhabditis elegans protein SAS-5 forms large oligomeric assemblies critical for centriole formation.
Elife, 4, 2015
4YPG
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BU of 4ypg by Molmil
Structural Insights Into the Neutralization Properties of a Human Anti-Interferon Monoclonal Antibody
Descriptor: Interferon alpha-2, NICKEL (II) ION, Sifalimumab heavy chain, ...
Authors:Oganesyan, V, Dall'Acqua, W.F.
Deposit date:2015-03-12
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights into the Neutralization Properties of the Fully Human, Anti-interferon Monoclonal Antibody Sifalimumab.
J.Biol.Chem., 290, 2015
2N5J
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BU of 2n5j by Molmil
Regnase-1 N-terminal domain
Descriptor: Ribonuclease ZC3H12A
Authors:Yokogawa, M, Tsushima, T, Noda, N.N, Kumeta, H, Adachi, W, Enokizono, Y, Yamashita, K, Standley, D.M, Takeuchi, O, Akira, S, Inagaki, F.
Deposit date:2015-07-18
Release date:2016-03-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016
5XJB
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BU of 5xjb by Molmil
The Crystal Structure of the Minimal Core Domain of the Microtubule Depolymerizer KIF2C Complexed with ADP-Mg-BeFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Kinesin-like protein KIF2C, ...
Authors:Ogawa, T, Jiang, X, Hirokawa, N.
Deposit date:2017-04-30
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism of Catalytic Microtubule Depolymerization via KIF2-Tubulin Transitional Conformation
Cell Rep, 20, 2017
4YPE
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BU of 4ype by Molmil
ASH1L SET domain H2193F mutant in complex with S-adenosyl methionine (SAM)
Descriptor: Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ZINC ION
Authors:Rogawski, D.S, Ndoj, J, Cho, H.J, Maillard, I, Grembecka, J, Cierpicki, T.
Deposit date:2015-03-12
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.
Biochemistry, 54, 2015
5W98
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BU of 5w98 by Molmil
Pyridine synthase, PbtD, from GE2270 biosynthesis
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PbtD
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2017-06-22
Release date:2017-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4YNM
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BU of 4ynm by Molmil
ASH1L wild-type SET domain in complex with S-adenosyl methionine (SAM)
Descriptor: Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ZINC ION
Authors:Rogawski, D.S, Ndoj, J, Cho, H.-J, Maillard, I, Grembecka, J, Cierpicki, T.
Deposit date:2015-03-10
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.
Biochemistry, 54, 2015
6J61
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BU of 6j61 by Molmil
Crystal Structure of Thymidylate Synthase, Thy1, from Thermus thermophilus having an Extra C Terminal Domain
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent thymidylate synthase, PHOSPHATE ION
Authors:Ogawa, A, Sampei, G, Kawai, G.
Deposit date:2019-01-12
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the flavin-dependent thymidylate synthase Thy1 from Thermus thermophilus with an extra C-terminal domain.
Acta Crystallogr.,Sect.F, 75, 2019
1RQ0
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BU of 1rq0 by Molmil
Crystal structure of peptide releasing factor 1
Descriptor: Peptide chain release factor 1
Authors:Shin, D.H, Brandsen, J, Jancarik, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2003-12-03
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural analyses of peptide release factor 1 from Thermotoga maritima reveal domain flexibility required for its interaction with the ribosome.
J.Mol.Biol., 341, 2004
1T6R
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BU of 1t6r by Molmil
Solution structure of TM1442, a putative anti sigma factor antagonist in phosphorylated state
Descriptor: Putative anti-sigma factor antagonist TM1442
Authors:Etezady-Esfarjani, T, Placzek, W, Herrmann, T, Lesley, S.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2004-05-07
Release date:2005-05-24
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structures of the putative anti-sigma-factor antagonist TM1442 from Thermotoga maritima in the free and phosphorylated states.
Magn.Reson.Chem., 44 Spec No, 2006
5WA3
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BU of 5wa3 by Molmil
Pyridine synthase, TbtD, from thiomuracin biosynthesis
Descriptor: Pyridine synthase TbtD
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2017-06-24
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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