PDB: 75 resultsInfo pagesStatus searchChemie searchBIRD

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7TVM	Viral AMG chitosanase V-Csn, apo structure, crystal form 2 Descriptor: 1,2-ETHANEDIOL, Viral chitosanase V-Csn Authors: Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K. Deposit date: 2022-02-05 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase. Nat Commun, 13, 2022
7VME	Crystal structure of a hydrolase in apo form 2 Descriptor: CALCIUM ION, hydrolase Authors: Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R. Deposit date: 2021-10-08 Release date: 2022-10-12 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Crystal structure of a hydrolase in apo form 2 to be published
7VPB	Crystal structure of a novel hydrolase in apo form Descriptor: 4-(2-hydroxyethylcarbamoyl)benzoic acid, ACETATE ION, plastic degrading hydrolase Ple629 Authors: Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R. Deposit date: 2021-10-15 Release date: 2022-10-19 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.68 Å) Cite: Structural insight and engineering of a plastic degrading hydrolase Ple629. Biochem.Biophys.Res.Commun., 626, 2022
8ERK	Acheta domesticus segmented densovirus, high buoyancy (HB) capsid, a mixed population of empty and immature full particles Descriptor: Acheta domesticus segmented densovirus major capsid protein Authors: Penzes, J.J, McKenna, R, Tijssen, P. Deposit date: 2022-10-12 Release date: 2022-11-09 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Bipartite genome and structural organization of the parvovirus Acheta domesticus segmented densovirus. Nat Commun, 14, 2023
8EU6	Acheta domesticus segmented densovirus high buoyancy fraction 1 (HB1) empty capsid structure Descriptor: Capsid protein Authors: Penzes, J.J, McKenna, R, Tijssen, P. Deposit date: 2022-10-18 Release date: 2022-11-09 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3 Å) Cite: Bipartite genome and structural organization of the parvovirus Acheta domesticus segmented densovirus. Nat Commun, 14, 2023
8EU5	Acheta domesticus segmented densovirus high buoyancy fraction 2 empty capsid structure Descriptor: Capsid protein Authors: Penzes, J.J, McKenna, R, Tijssen, P. Deposit date: 2022-10-18 Release date: 2022-11-09 Last modified: 2023-06-14 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural and molecular biology of Acheta domesticus segmented densovirus, the first parvovirus to harbor a bipartite genome To Be Published
8ER8	Acheta domesticus segmented densovirus, mature virion capsid structure Descriptor: Acheta domesticus segmented densovirus major capsid protein, DNA (5'-D(P*AP*AP*TP*AP*A)-3') Authors: Penzes, J.J, McKenna, R, Tijssen, P. Deposit date: 2022-10-11 Release date: 2022-11-09 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: Bipartite genome and structural organization of the parvovirus Acheta domesticus segmented densovirus. Nat Commun, 14, 2023
8EU7	Acheta domesticus segmented densovirus VP-ORF1 virus-like particle Descriptor: Capsid protein Authors: Penzes, J.J, McKenna, R, Tijssen, P. Deposit date: 2022-10-18 Release date: 2022-11-09 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Bipartite genome and structural organization of the parvovirus Acheta domesticus segmented densovirus. Nat Commun, 14, 2023
7SIF	Crystal Structure of HLA B*3505 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-2-microglobulin, ... Authors: Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. Deposit date: 2021-10-14 Release date: 2022-11-23 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (1.73 Å) Cite: Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
7SIG	Crystal Structure of HLA B*3501 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I Descriptor: Beta-2-microglobulin, CITRATE ANION, MHC class I antigen, ... Authors: Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. Deposit date: 2021-10-14 Release date: 2022-11-23 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (1.741 Å) Cite: Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
7SIH	Crystal Structure of HLA B*3503 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ... Authors: Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. Deposit date: 2021-10-14 Release date: 2022-11-23 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
8A2C	The crystal structure of the S178A mutant of PET40, a PETase enzyme from an unclassified Amycolatopsis Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... Authors: Costanzi, E, Applegate, V, Port, A, Smits, S.H.J. Deposit date: 2022-06-03 Release date: 2023-06-14 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: The metagenome-derived esterase PET40 hydrolyses polyethylene terephthalate (PET) and is well conserved in the GC-rich gram-positives Amycolatopsis and Streptomyces To Be Published
8GYA	Crystal structure of Alongshan virus methyltransferase bound to Sinefungin Descriptor: Methyltransferase, SINEFUNGIN Authors: Chen, H, Lin, S, Lu, G.W. Deposit date: 2022-09-21 Release date: 2023-09-27 Last modified: 2024-04-10 Method: X-RAY DIFFRACTION (2.005 Å) Cite: Structural and functional basis of low-affinity SAM/SAH-binding in the conserved MTase of the multi-segmented Alongshan virus distantly related to canonical unsegmented flaviviruses. Plos Pathog., 19, 2023
8GY9	Crystal structure of Alongshan virus methyltransferase bound to S-adenosyl-L-methionine Descriptor: Methyltransferase, S-ADENOSYLMETHIONINE Authors: Chen, H, Lin, S, Lu, G.W. Deposit date: 2022-09-21 Release date: 2023-09-27 Last modified: 2024-04-10 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural and functional basis of low-affinity SAM/SAH-binding in the conserved MTase of the multi-segmented Alongshan virus distantly related to canonical unsegmented flaviviruses. Plos Pathog., 19, 2023
8GYB	Crystal structure of Alongshan virus methyltransferase bound to S-adenosyl-L-homocysteine Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE Authors: Chen, H, Lin, S, Lu, G.W. Deposit date: 2022-09-22 Release date: 2023-09-27 Last modified: 2024-04-10 Method: X-RAY DIFFRACTION (2.101 Å) Cite: Structural and functional basis of low-affinity SAM/SAH-binding in the conserved MTase of the multi-segmented Alongshan virus distantly related to canonical unsegmented flaviviruses. Plos Pathog., 19, 2023
8GY4	Crystal structure of Alongshan virus methyltransferase Descriptor: Methyltransferase Authors: Chen, H, Lin, S, Lu, G.W. Deposit date: 2022-09-21 Release date: 2023-09-27 Last modified: 2024-04-10 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural and functional basis of low-affinity SAM/SAH-binding in the conserved MTase of the multi-segmented Alongshan virus distantly related to canonical unsegmented flaviviruses. Plos Pathog., 19, 2023
8HXK	BANAL-20-236 S1 in complex with R. Affinis ACE2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ... Authors: Wang, X, Xu, G. Deposit date: 2023-01-04 Release date: 2024-01-10 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: The selective effect of fecal-oral transmission on the S proteins of bat SARS-CoV-2 related coronaviruses in favor of stability over infectivity To Be Published
8HXJ	BANAL-20-52 Spike trimer Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Wang, X, Xu, G. Deposit date: 2023-01-04 Release date: 2024-01-10 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: The selective effect of fecal-oral transmission on the S proteins of bat SARS-CoV-2 related coronaviruses in favor of stability over infectivity To Be Published
8I3W	BANAL-20-236 Spike trimer Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Wang, X, Xu, G. Deposit date: 2023-01-18 Release date: 2024-01-24 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: The selective effect of fecal-oral transmission on the S proteins of bat SARS-CoV-2 related coronaviruses in favor of stability over infectivity To Be Published
8KEE	Cyanophage A-1(L) sheath-tube Descriptor: sheath, tube Authors: Yu, R.C, Li, Q, Zhou, C.Z. Deposit date: 2023-08-11 Release date: 2024-04-10 Method: ELECTRON MICROSCOPY (3.26 Å) Cite: Structure of the intact tail machine of Anabaena myophage A-1(L). Nat Commun, 15, 2024
8KEA	Cyanophage A-1(L) baseplate-initiators Descriptor: baseplate gp16, central spike, hub, ... Authors: Yu, R.C, Li, Q, Zhou, C.Z. Deposit date: 2023-08-11 Release date: 2024-04-10 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Structure of the intact tail machine of Anabaena myophage A-1(L). Nat Commun, 15, 2024
8KEC	Cyanophage A-1(L) tail fiber Descriptor: Long tail fiber, short tail fiber Authors: Yu, R.C, Li, Q, Zhou, C.Z. Deposit date: 2023-08-11 Release date: 2024-04-10 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structure of the intact tail machine of Anabaena myophage A-1(L). Nat Commun, 15, 2024
8KE9	The CBD domain of cyanophage A-1(L) short tail fiber Descriptor: Tail fiber protein Authors: Yu, R.C, Li, Q, Zhou, C.Z. Deposit date: 2023-08-11 Release date: 2024-04-10 Method: ELECTRON MICROSCOPY (3.76 Å) Cite: Structure of the intact tail machine of Anabaena myophage A-1(L). Nat Commun, 15, 2024
8KEG	Cyanophage A-1(L) neck/gp5-neck fiber Descriptor: Neck gp5, neck fiber gp82N Authors: Yu, R.C, Li, Q, Zhou, C.Z. Deposit date: 2023-08-11 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.66 Å) Cite: Structure of the intact tail machine of Anabaena myophage A-1(L). Nat Commun, 15, 2024
8KEF	Cyanophage A-1(L) neck/gp7-terminator Descriptor: Neck gp7, Terminator gp8 Authors: Yu, R.C, Li, Q, Zhou, C.Z. Deposit date: 2023-08-11 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Structure of the intact tail machine of Anabaena myophage A-1(L). Nat Commun, 15, 2024

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