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PDB: 29 results

3IQD
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Structure of Octopine-dehydrogenase in complex with NADH and Agmatine
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, AGMATINE, Octopine dehydrogenase
Authors:Smits, S.H.J, Meyer, T, Mueller, A, Willbold, D, Grieshaber, M.K, Schmitt, L.
Deposit date:2009-08-20
Release date:2010-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into the mechanism of ligand binding to octopine dehydrogenase from Pecten maximus by NMR and crystallography
Plos One, 5, 2010
3CHG
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The compatible solute-binding protein OpuAC from Bacillus subtilis in complex with DMSA
Descriptor: (dimethyl-lambda~4~-sulfanyl)acetic acid, Glycine betaine-binding protein
Authors:Smits, S.H.J, Hoing, M, Lecher, J, Jebbar, M, Schmitt, L, Bremer, E.
Deposit date:2008-03-09
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Compatible-Solute-Binding Protein OpuAC from Bacillus subtilis: Ligand Binding, Site-Directed Mutagenesis, and Crystallographic Studies
J.Bacteriol., 190, 2008
3C7A
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A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH)
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Octopine dehydrogenase
Authors:Smits, S.H.J, Mueller, A, Schmitt, L, Grieshaber, M.K.
Deposit date:2008-02-07
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structural basis for substrate selectivity and stereoselectivity in octopine dehydrogenase from Pecten maximus.
J.Mol.Biol., 381, 2008
3C7D
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A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH-Pyruvate)
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Octopine dehydrogenase, PYRUVIC ACID
Authors:Smits, S.H.J, Mueller, A, Schmitt, L, Grieshaber, M.K.
Deposit date:2008-02-07
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A structural basis for substrate selectivity and stereoselectivity in octopine dehydrogenase from Pecten maximus.
J.Mol.Biol., 381, 2008
3C7C
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A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH-L-Arginine)
Descriptor: ARGININE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Octopine dehydrogenase
Authors:Smits, S.H.J, Mueller, A, Schmitt, L, Grieshaber, M.K.
Deposit date:2008-02-07
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A structural basis for substrate selectivity and stereoselectivity in octopine dehydrogenase from Pecten maximus.
J.Mol.Biol., 381, 2008
8A2C
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The crystal structure of the S178A mutant of PET40, a PETase enzyme from an unclassified Amycolatopsis
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Costanzi, E, Applegate, V, Port, A, Smits, S.H.J.
Deposit date:2022-06-03
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The metagenome-derived esterase PET40 hydrolyses polyethylene terephthalate (PET) and is well conserved in the GC-rich gram-positives Amycolatopsis and Streptomyces
To Be Published
6Z68
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A novel metagenomic alpha/beta-fold esterase
Descriptor: Acetyl esterase/lipase, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Bollinger, A, Thies, S, Hoeppner, A, Kobus, S, Jaeger, K.-E, Smits, S.H.J.
Deposit date:2020-05-28
Release date:2020-12-30
Last modified:2021-06-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of a novel family IV esterase in free and substrate-bound form.
Febs J., 288, 2021
6Z69
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A novel metagenomic alpha/beta-fold esterase
Descriptor: 7-hydroxy-4-methyl-2H-chromen-2-one, Acetyl esterase/lipase, MAGNESIUM ION, ...
Authors:Bollinger, A, Thies, S, Hoeppner, A, Kobus, S, Jaeger, K.-E, Smits, S.H.J.
Deposit date:2020-05-28
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structures of a novel family IV esterase in free and substrate-bound form.
Febs J., 288, 2021
8B4U
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The crystal structure of PET46, a PETase enzyme from Candidatus bathyarchaeota
Descriptor: 1,2-ETHANEDIOL, Alpha/beta hydrolase, CHLORIDE ION, ...
Authors:Costanzi, E, Applegate, V, Schumacher, J, Smits, S.H.J.
Deposit date:2022-09-21
Release date:2023-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:An archaeal lid-containing feruloyl esterase degrades polyethylene terephthalate.
Commun Chem, 6, 2023
3B5J
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Crystal Structures of the S504A Mutant of an Isolated ABC-ATPase in Complex with TNP-ADP
Descriptor: 2',3'-O-[(1R,6R)-2,4,6-trinitrocyclohexa-2,4-diene-1,1-diyl]adenosine 5'-(trihydrogen diphosphate), Alpha-hemolysin translocation ATP-binding protein hlyB
Authors:Oswald, C, Jenewein, S, Smits, S.H.J, Holland, I.B, Schmitt, L.
Deposit date:2007-10-26
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Water-mediated protein-fluorophore interactions modulate the affinity of an ABC-ATPase/TNP-ADP complex
J.Struct.Biol., 162, 2008
1I1G
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CRYSTAL STRUCTURE OF THE LRP-LIKE TRANSCRIPTIONAL REGULATOR FROM THE ARCHAEON PYROCOCCUS FURIOSUS
Descriptor: TRANSCRIPTIONAL REGULATOR LRPA
Authors:Leonard, P.M, Smits, S.H.J, Sedelnikova, S.E, Brinkman, A.B, de Vos, W.M, van der Oost, J, Rice, D.W, Rafferty, J.B.
Deposit date:2001-02-01
Release date:2002-02-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus.
EMBO J., 20, 2001
3R6U
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BU of 3r6u by Molmil
Crystal structure of choline binding protein OpuBC from Bacillus subtilis
Descriptor: CHOLINE ION, Choline-binding protein
Authors:Pittelkow, M, Tschapek, B, Smits, S.H.J, Schmitt, L, Bremer, E.
Deposit date:2011-03-22
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The Crystal Structure of the Substrate-Binding Protein OpuBC from Bacillus subtilis in Complex with Choline.
J.Mol.Biol., 411, 2011
8B6E
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crystal structure of the DNA-binding short chromatophore-targeted protein sCTP-23166 from Paulinella chromatophora
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, sCTP-23166
Authors:Macorano, L, Applegate, V, Hoeppner, A, Smits, S.H.J, Nowack, E.C.M.
Deposit date:2022-09-27
Release date:2023-07-12
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:DNA-binding and protein structure of nuclear factors likely acting in genetic information processing in the Paulinella chromatophore.
Proc.Natl.Acad.Sci.USA, 120, 2023
5BXX
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Crystal structure of the ectoine synthase from the cold-adapted marine bacterium Sphingopyxis alaskensis
Descriptor: L-ectoine synthase
Authors:Widderich, N, Kobus, S, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2015-06-09
Release date:2016-04-27
Last modified:2016-07-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemistry and Crystal Structure of Ectoine Synthase: A Metal-Containing Member of the Cupin Superfamily.
Plos One, 11, 2016
5BY5
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High resolution structure of the ectoine synthase from the cold-adapted marine bacterium Sphingopyxis alaskensis
Descriptor: L-ectoine synthase, S-1,2-PROPANEDIOL
Authors:Widderich, N, Kobus, S, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2015-06-10
Release date:2016-04-27
Last modified:2016-07-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Biochemistry and Crystal Structure of Ectoine Synthase: A Metal-Containing Member of the Cupin Superfamily.
Plos One, 11, 2016
5DCM
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Structure of a lantibiotic response regulator: C-terminal domain of the nisin resistance regulator NsrR
Descriptor: PhoB family transcriptional regulator
Authors:Khosa, S, Kleinschrodt, D, Hoeppner, A, Smits, S.H.J.
Deposit date:2015-08-24
Release date:2016-07-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Response Regulator NsrR from Streptococcus agalactiae, Which Is Involved in Lantibiotic Resistance.
Plos One, 11, 2016
3FXB
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BU of 3fxb by Molmil
Crystal structure of the ectoine-binding protein UehA
Descriptor: (4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, TRAP dicarboxylate transporter, DctP subunit
Authors:Lecher, J, Pittelkow, M, Bursy, J, Smits, S.H.J, Schmitt, L, Bremer, E.
Deposit date:2009-01-20
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of UehA in complex with ectoine-A comparison with other TRAP-T binding proteins.
J.Mol.Biol., 389, 2009
3HCQ
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Structural analysis of the choline binding protein ChoX in a semi-closed and ligand-free conformation
Descriptor: Putative choline ABC transporter, periplasmic solute-binding component
Authors:Oswald, C, Smits, S.H.J, Hoeing, M, Bremer, E, Schmitt, L.
Deposit date:2009-05-06
Release date:2009-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural analysis of the choline-binding protein ChoX in a semi-closed and ligand-free conformation.
Biol.Chem., 390, 2009
6SCD
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BU of 6scd by Molmil
Polyester hydrolase PE-H Y250S mutant of Pseudomonas aestusnigri
Descriptor: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bollinger, A, Thies, S, Kobus, S, Hoeppner, A, Smits, S.H.J, Jaeger, K.-E.
Deposit date:2019-07-24
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A Novel Polyester Hydrolase From the Marine BacteriumPseudomonas aestusnigri -Structural and Functional Insights.
Front Microbiol, 11, 2020
6SBN
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Polyester hydrolase PE-H of Pseudomonas aestusnigri
Descriptor: ACETATE ION, SODIUM ION, polyester hydrolase
Authors:Bollinger, A, Thies, S, Kobus, S, Hoeppner, A, Smits, S.H.J, Jaeger, K.-E.
Deposit date:2019-07-22
Release date:2020-02-26
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:A Novel Polyester Hydrolase From the Marine BacteriumPseudomonas aestusnigri -Structural and Functional Insights.
Front Microbiol, 11, 2020
6SL8
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Diaminobutyrate acetyltransferase EctA from Paenibacillus lautus in complex with its substrate L-2,4-diaminobutyric acid (DAB)
Descriptor: 2,4-DIAMINOBUTYRIC ACID, GLYCEROL, L-2,4-diaminobutyric acid acetyltransferase, ...
Authors:Richter, A.A, Kobus, S, Czech, L, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2019-08-19
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.
J.Biol.Chem., 295, 2020
6SK1
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Diaminobutyrate acetyltransferase EctA from Paenibacillus lautus in complex with coenzyme A
Descriptor: ACETATE ION, COENZYME A, L-2,4-diaminobutyric acid acetyltransferase
Authors:Richter, A.A, Kobus, S, Czech, L, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2019-08-14
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.
J.Biol.Chem., 295, 2020
6SLL
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BU of 6sll by Molmil
Diaminobutyrate acetyltransferase EctA from Paenibacillus lautus in complex with its substrate L-2,4-diaminobutyric acid (DAB) and coenzyme A
Descriptor: 2,4-DIAMINOBUTYRIC ACID, COENZYME A, L-2,4-diaminobutyric acid acetyltransferase, ...
Authors:Richter, A.A, Kobus, S, Czech, L, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2019-08-20
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.
J.Biol.Chem., 295, 2020
6SJY
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Diaminobutyrate acetyltransferase EctA from Paenibacillus lautus in complex with its product ADABA
Descriptor: (2~{S})-4-acetamido-2-azanyl-butanoic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Richter, A.A, Kobus, S, Czech, L, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2019-08-14
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.
J.Biol.Chem., 295, 2020
6SLK
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Diaminobutyrate acetyltransferase EctA from Paenibacillus lautus
Descriptor: L-2,4-diaminobutyric acid acetyltransferase, SODIUM ION, SULFATE ION
Authors:Richter, A.A, Kobus, S, Czech, L, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2019-08-20
Release date:2020-01-29
Last modified:2021-06-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.
J.Biol.Chem., 295, 2020

 

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