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5CXY
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BU of 5cxy by Molmil
Structure of a Glycosyltransferase in Complex with Inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Volkers, G, Strynadka, N.C.J.
Deposit date:2015-07-29
Release date:2016-09-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:To be published.
To be published
3DYV
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BU of 3dyv by Molmil
Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
Descriptor: CHLORIDE ION, Esterase D
Authors:Bennett, M.D, Delabre, M.-L, Holland, R, Norris, G.E.
Deposit date:2008-07-28
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
To be Published
6KZF
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BU of 6kzf by Molmil
Racemic X-ray Structure of Calcicludine
Descriptor: D-calcicludine, Kunitz-type serine protease inhibitor homolog calcicludine
Authors:Qu, Q, Gao, S, Liu, L.
Deposit date:2019-09-24
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Synthesis of Disulfide Surrogate Peptides Incorporating Large-Span Surrogate Bridges Through a Native-Chemical-Ligation-Assisted Diaminodiacid Strategy
Angew.Chem.Int.Ed.Engl., 59, 2020
6L17
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BU of 6l17 by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with 10-DEBC derivatives
Descriptor: 7-chloranyl-5-[3-[(3~{S})-piperidin-3-yl]propyl]pyrido[3,4-b][1,4]benzoxazin-8-amine, Serine/threonine-protein kinase pim-1
Authors:Zhang, W, Xie, Y, Cao, R, Huang, N, Zhou, Y.
Deposit date:2019-09-27
Release date:2020-09-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-Based Optimization of 10-DEBC Derivatives as Potent and Selective Pim-1 Kinase Inhibitors.
J.Chem.Inf.Model., 60, 2020
6L67
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BU of 6l67 by Molmil
X-ray structure of human galectin-10 in complex with D-galactose
Descriptor: Galectin-10, beta-D-galactopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
5D26
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BU of 5d26 by Molmil
First bromodomain of BRD4 bound to inhibitor XD28
Descriptor: (R,R)-2,3-BUTANEDIOL, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
Authors:Wohlwend, D, Huegle, M.
Deposit date:2015-08-05
Release date:2016-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:4-Acyl Pyrrole Derivatives Yield Novel Vectors for Designing Inhibitors of the Acetyl-Lysine Recognition Site of BRD4(1).
J.Med.Chem., 59, 2016
3DR6
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BU of 3dr6 by Molmil
Structure of yncA, a putative ACETYLTRANSFERASE from Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, yncA
Authors:Singer, A.U, Skarina, T, Onopriyenko, O, Edwards, A.M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-07-10
Release date:2008-09-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Funded by the national institute of allergy and infectious diseases of nih (contract number hhsn272200700058c).
To be Published
5D7P
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BU of 5d7p by Molmil
Crystal structure of human Sirt2 in complex with ADPR and EX-243
Descriptor: (1S)-6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1- carboxamide, DI(HYDROXYETHYL)ETHER, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Rumpf, T, Gerhardt, S, Einsle, O, Jung, M.
Deposit date:2015-08-14
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Seeding for sirtuins: microseed matrix seeding to obtain crystals of human Sirt3 and Sirt2 suitable for soaking.
Acta Crystallogr.,Sect.F, 71, 2015
8HPZ
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BU of 8hpz by Molmil
Crystal structure of the MlaD domain of the MlaD protein from Escherichia coli (Form I)
Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, Intermembrane phospholipid transport system binding protein MlaD
Authors:Dutta, A, Kanaujia, S.P.
Deposit date:2022-12-13
Release date:2024-01-10
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structural Features of MlaD Illuminate its Unique Ligand-Transporting Mechanism and Ancestry.
Protein J., 43, 2024
3DGQ
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BU of 3dgq by Molmil
Crystal structure of the glutathione transferase PI enzyme in complex with the bifunctional inhibitor, etharapta
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Parker, L.J.
Deposit date:2008-06-15
Release date:2009-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Rational design of an organometallic glutathione transferase inhibitor
Angew.Chem.Int.Ed.Engl., 48, 2009
6KYS
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BU of 6kys by Molmil
The structure of the M. tb toxin MazF-mt1
Descriptor: Endoribonuclease MazF9
Authors:Xie, W, Chen, R, Zhou, J.
Deposit date:2019-09-20
Release date:2020-08-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.200414 Å)
Cite:Conserved Conformational Changes in the Regulation ofMycobacterium tuberculosisMazEF-mt1.
Acs Infect Dis., 6, 2020
6L01
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BU of 6l01 by Molmil
Crystal structure of E.coli DNA gyrase B in complex with 2-oxo-1,2-dihydroquinoline derivative
Descriptor: 2-[3-[[8-(methylamino)-2-oxidanylidene-1~{H}-quinolin-3-yl]carbonylamino]phenyl]ethanoic acid, DNA gyrase subunit B
Authors:Mima, M, Takeuchi, T, Ushiyama, F.
Deposit date:2019-09-25
Release date:2020-05-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Lead Identification of 8-(Methylamino)-2-oxo-1,2-dihydroquinoline Derivatives as DNA Gyrase Inhibitors: Hit-to-Lead Generation Involving Thermodynamic Evaluation.
Acs Omega, 5, 2020
5DAN
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BU of 5dan by Molmil
Crystal structure of a novel aldo keto reductase Tm1743 from Thermotoga maritima in complex with NADP+
Descriptor: 2,5-diketo-D-gluconic acid reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Xu, X.
Deposit date:2015-08-20
Release date:2016-09-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a novel aldo keto reductase Tm1743 from Thermotoga maritima in complex with NADP+
To Be Published
3DU0
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BU of 3du0 by Molmil
E. coli dihydrodipicolinate synthase with first substrate, pyruvate, bound in active site
Descriptor: CHLORIDE ION, Dihydrodipicolinate synthase, GLYCEROL, ...
Authors:Dobson, R.C.J, Devenish, S.R.A, Gerrard, J.A, Jameson, G.B.
Deposit date:2008-07-16
Release date:2008-11-18
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:The high-resolution structure of dihydrodipicolinate synthase from Escherichia coli bound to its first substrate, pyruvate.
Acta Crystallogr.,Sect.F, 64, 2008
3UAM
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BU of 3uam by Molmil
Crystal structure of a chitin binding domain from Burkholderia pseudomallei
Descriptor: Chitin binding domain, GLYCEROL, NITRATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-10-21
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a chitin binding domain from Burkholderia pseudomallei
to be published
3E1G
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BU of 3e1g by Molmil
Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
Descriptor: DIETHYL PHOSPHONATE, Esterase D
Authors:Bennett, M.D, Delabre, M.-L, Holland, R, Norris, G.E.
Deposit date:2008-08-04
Release date:2009-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
To be Published
3DJ4
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BU of 3dj4 by Molmil
Crystal Structure of GlmU from Mycobacterium tuberculosis in complex with URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE.
Descriptor: Bifunctional protein glmU, COBALT (II) ION, MAGNESIUM ION, ...
Authors:Verma, S.K, Prakash, B.
Deposit date:2008-06-22
Release date:2009-05-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:PknB-mediated phosphorylation of a novel substrate, N-acetylglucosamine-1-phosphate uridyltransferase, modulates its acetyltransferase activity.
J.Mol.Biol., 386, 2009
3TZ6
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BU of 3tz6 by Molmil
Crystal structure of Aspartate semialdehyde dehydrogenase Complexed With inhibitor SMCS (CYS) And Phosphate From Mycobacterium tuberculosis H37Rv
Descriptor: Aspartate-semialdehyde dehydrogenase, CYSTEINE, GLYCEROL, ...
Authors:Vyas, R, Tewari, R, Weiss, M.S, Karthikeyan, S.
Deposit date:2011-09-27
Release date:2012-05-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of ternary complexes of aspartate-semialdehyde dehydrogenase (Rv3708c) from Mycobacterium tuberculosis H37Rv
Acta Crystallogr.,Sect.D, 68, 2012
3E17
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BU of 3e17 by Molmil
Crystal structure of the second PDZ domain from human Zona Occludens-2
Descriptor: Tight junction protein ZO-2
Authors:Chen, H, Tong, S.L, Teng, M.K, Niu, L.W.
Deposit date:2008-08-01
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of the second PDZ domain from human zonula occludens 2
Acta Crystallogr.,Sect.F, 65, 2009
5D3N
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BU of 5d3n by Molmil
First bromodomain of BRD4 bound to inhibitor XD40
Descriptor: 4-acetyl-3-ethyl-5-methyl-N-[2-methyl-5-(methylsulfamoyl)phenyl]-1H-pyrrole-2-carboxamide, Bromodomain-containing protein 4
Authors:Wohlwend, D, Huegle, M.
Deposit date:2015-08-06
Release date:2016-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:4-Acyl Pyrrole Derivatives Yield Novel Vectors for Designing Inhibitors of the Acetyl-Lysine Recognition Site of BRD4(1).
J.Med.Chem., 59, 2016
5D3T
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BU of 5d3t by Molmil
First bromodomain of BRD4 bound to inhibitor XD47
Descriptor: 1,2-ETHANEDIOL, 4-acetyl-N-(3-carbamoylbenzyl)-3-ethyl-N,5-dimethyl-1H-pyrrole-2-carboxamide, Bromodomain-containing protein 4, ...
Authors:Wohlwend, D, Huegle, M.
Deposit date:2015-08-06
Release date:2016-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:4-Acyl Pyrrole Derivatives Yield Novel Vectors for Designing Inhibitors of the Acetyl-Lysine Recognition Site of BRD4(1).
J.Med.Chem., 59, 2016
6KZV
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BU of 6kzv by Molmil
Crystal structure of E.coli DNA gyrase B in complex with 2-oxo-1,2-dihydroquinoline derivative
Descriptor: DNA gyrase subunit B, ~{N}-[2-[[cyclohexyl(methyl)amino]methyl]phenyl]-2-oxidanylidene-1~{H}-quinoline-3-carboxamide
Authors:Mima, M, Ushiyama, F.
Deposit date:2019-09-25
Release date:2020-05-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lead Identification of 8-(Methylamino)-2-oxo-1,2-dihydroquinoline Derivatives as DNA Gyrase Inhibitors: Hit-to-Lead Generation Involving Thermodynamic Evaluation.
Acs Omega, 5, 2020
6L13
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BU of 6l13 by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with 10-DEBC derivatives
Descriptor: 2-chloranyl-10-(2-piperidin-4-ylethyl)phenoxazine, Serine/threonine-protein kinase pim-1
Authors:Zhang, W, Xie, Y, Cao, R, Huang, N, Zhou, Y.
Deposit date:2019-09-27
Release date:2020-05-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure-Based Optimization of 10-DEBC Derivatives as Potent and Selective Pim-1 Kinase Inhibitors.
J.Chem.Inf.Model., 60, 2020
6D0V
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BU of 6d0v by Molmil
Tryptophan synthase Q114A mutant in complex with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the alpha-site, aminoacrylate at the beta site, and cesium ion at the metal coordination site
Descriptor: 1,2-ETHANEDIOL, 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, ...
Authors:Hilario, E, Dunn, M.F, Mueller, L.J, Fan, L.
Deposit date:2018-04-11
Release date:2019-04-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Tryptophan synthase Q114A mutant in complex with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the alpha-site, aminoacrylate at the beta site, and cesium ion at the metal coordination site.
To be Published
6L2L
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BU of 6l2l by Molmil
The structure of the tRNA-specific deaminase from M. capricolum
Descriptor: Nucleoside deaminase family protein, ZINC ION
Authors:Xie, W, Liu, H, Wu, S.
Deposit date:2019-10-05
Release date:2020-08-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.40045834 Å)
Cite:Structure of a tRNA-specific deaminase with compromised deamination activity.
Biochem.J., 477, 2020

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