Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PK9
DownloadVisualize
BU of 8pk9 by Molmil
Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on NFS1 and ISCU2)
Descriptor: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ...
Authors:Steinhilper, R, Murphy, B.J.
Deposit date:2023-06-26
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2.
Nat Commun, 15, 2024
8PK8
DownloadVisualize
BU of 8pk8 by Molmil
Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on ISCU2)
Descriptor: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ...
Authors:Steinhilper, R, Murphy, B.J.
Deposit date:2023-06-26
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2.
Nat Commun, 15, 2024
8PKA
DownloadVisualize
BU of 8pka by Molmil
Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (without frataxin)
Descriptor: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ...
Authors:Steinhilper, R, Murphy, B.J.
Deposit date:2023-06-26
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2.
Nat Commun, 15, 2024
5A8Z
DownloadVisualize
BU of 5a8z by Molmil
Crystal Structure of human neutrophil elastase in complex with a dihydropyrimidone inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(4R)-7-methyl-2,5-bis(oxidanylidene)-1-[3-(trifluoromethyl)phenyl]-3,4,6,8-tetrahydropyrimido[4,5-d]pyridazin-4-yl]benzenecarbonitrile, Neutrophil elastase, ...
Authors:von Nussbaum, F, Li, V.M, Meibom, D, Anlauf, S, Bechem, M, Delbeck, M, Gerisch, M, Harrenga, A, Karthaus, D, Lang, D, Lustig, K, Mittendorf, J, Schaefer, M, Schaefer, S, Schamberger, J.
Deposit date:2015-07-17
Release date:2016-08-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent and Selective Human Neutrophil Elastase Inhibitors with Novel Equatorial Ring Topology: in vivo Efficacy of the Polar Pyrimidopyridazine BAY-8040 in a Pulmonary Arterial Hypertension Rat Model.
ChemMedChem, 11, 2016
5AWX
DownloadVisualize
BU of 5awx by Molmil
Crystal structure of Human PTPRZ D1 domain
Descriptor: BROMIDE ION, Receptor-type tyrosine-protein phosphatase zeta
Authors:Sugawara, H.
Deposit date:2015-07-10
Release date:2016-02-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Small-molecule inhibition of PTPRZ reduces tumor growth in a rat model of glioblastoma
Sci Rep, 6, 2016
8OZ5
DownloadVisualize
BU of 8oz5 by Molmil
Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with substrate analog/inhibitor, 2-CN-benzoyl-CoA
Descriptor: 2-CN-benzoyl coenzyme A, CALCIUM ION, FE (III) ION, ...
Authors:Kayastha, K, Ermler, U.
Deposit date:2023-05-08
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.04 Å)
Cite:Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with substrate analog/inhibitor, 2-CN-benzoyl-CoA
To Be Published
8P02
DownloadVisualize
BU of 8p02 by Molmil
Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with product, benzoyl-CoA
Descriptor: CALCIUM ION, FE (III) ION, POTASSIUM ION, ...
Authors:Kayastha, K, Ermler, U.
Deposit date:2023-05-09
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with product, benzoyl-CoA
To Be Published
8QCY
DownloadVisualize
BU of 8qcy by Molmil
Cryo-EM structure of the outward-facing FLVCR2
Descriptor: Heme transporter FLVCR2
Authors:Weng, T.-H, Wu, D, Safarian, S.
Deposit date:2023-08-28
Release date:2024-04-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular mechanism of choline and ethanolamine transport in humans.
Nature, 630, 2024
8QD0
DownloadVisualize
BU of 8qd0 by Molmil
Cryo-EM structure of the inward-facing choline-bound FLVCR2
Descriptor: CHOLINE ION, Heme transporter FLVCR2
Authors:Weng, T.-H, Wu, D, Safarian, S.
Deposit date:2023-08-28
Release date:2024-04-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Molecular mechanism of choline and ethanolamine transport in humans.
Nature, 630, 2024
8Q7H
DownloadVisualize
BU of 8q7h by Molmil
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused cullin dimer
Descriptor: Cullin-9, E3 ubiquitin-protein ligase RBX1, NEDD8, ...
Authors:Hopf, L.V.M, Horn-Ghetko, D, Schulman, B.A.
Deposit date:2023-08-16
Release date:2024-04-17
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Noncanonical assembly, neddylation and chimeric cullin-RING/RBR ubiquitylation by the 1.8 MDa CUL9 E3 ligase complex.
Nat.Struct.Mol.Biol., 31, 2024
8QBN
DownloadVisualize
BU of 8qbn by Molmil
Structure of the non-canonical CTLH E3 substrate receptor WDR26 bound to YPEL5
Descriptor: Protein yippee-like 5, WD repeat-containing protein 26, ZINC ION
Authors:Chrustowicz, J, Sherpa, D, Schulman, B.A.
Deposit date:2023-08-24
Release date:2024-05-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Non-canonical substrate recognition by the human WDR26-CTLH E3 ligase regulates prodrug metabolism.
Mol.Cell, 84, 2024
8Q50
DownloadVisualize
BU of 8q50 by Molmil
Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, tetragonal crystalline form at 1.91-A resolution
Descriptor: ACETATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-07
Release date:2024-05-15
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 291, 2024
8QE8
DownloadVisualize
BU of 8qe8 by Molmil
Structure of the non-canonical CTLH E3 substrate receptor WDR26 bound to NMNAT1 substrate
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, WD repeat-containing protein 26, ...
Authors:Chrustowicz, J, Sherpa, D, Schulman, B.A.
Deposit date:2023-08-30
Release date:2024-05-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Non-canonical substrate recognition by the human WDR26-CTLH E3 ligase regulates prodrug metabolism.
Mol.Cell, 84, 2024
8Q5X
DownloadVisualize
BU of 8q5x by Molmil
MgADP-bound Fe protein of the molybdenum nitrogenase from Methanococcus maripaludis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 291, 2024
8Q5T
DownloadVisualize
BU of 8q5t by Molmil
Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, monoclinic crystalline form at 2.31-A resolution
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Nitrogenase iron protein 1
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 291, 2024
8Q5V
DownloadVisualize
BU of 8q5v by Molmil
MgADP-bound Fe protein of the molybdenum nitrogenase from Methanothermococcus thermolithotrophicus
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 291, 2024
8PN7
DownloadVisualize
BU of 8pn7 by Molmil
Engineered glycolyl-CoA carboxylase (G20R variant) with bound CoA
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ...
Authors:Zarzycki, J, Marchal, D.G, Schulz, L, Prinz, S, Erb, T.J.
Deposit date:2023-06-30
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.03 Å)
Cite:Machine Learning-Supported Enzyme Engineering toward Improved CO 2 -Fixation of Glycolyl-CoA Carboxylase.
Acs Synth Biol, 12, 2023
5A8X
DownloadVisualize
BU of 5a8x by Molmil
Crystal Structure of human neutrophil elastase in complex with a dihydropyrimidone inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neutrophil elastase, alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:vonNussbaum, F, Li, V.M, Meibom, D, Anlauf, S, Bechem, M, Delbeck, M, Gerisch, M, Harrenga, A, Karthaus, D, Lang, D, Lustig, K, Mittendorf, J, Schaefer, M, Schaefer, S, Schamberger, J.
Deposit date:2015-07-17
Release date:2016-08-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Potent and Selective Human Neutrophil Elastase Inhibitors with Novel Equatorial Ring Topology: in vivo Efficacy of the Polar Pyrimidopyridazine BAY-8040 in a Pulmonary Arterial Hypertension Rat Model.
ChemMedChem, 11, 2016
8PN8
DownloadVisualize
BU of 8pn8 by Molmil
Engineered glycolyl-CoA carboxylase (L100N variant) with bound CoA
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ...
Authors:Zarzycki, J, Marchal, D.G, Schulz, L, Prinz, S, Erb, T.J.
Deposit date:2023-06-30
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Machine Learning-Supported Enzyme Engineering toward Improved CO 2 -Fixation of Glycolyl-CoA Carboxylase.
Acs Synth Biol, 12, 2023
8P8G
DownloadVisualize
BU of 8p8g by Molmil
Nitrogenase MoFe protein from A. vinelandii beta double mutant D353G/D357G
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-06-01
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Mononuclear Metal-Binding Site of Mo-Nitrogenase Is Not Required for Activity.
Jacs Au, 3, 2023
5A2C
DownloadVisualize
BU of 5a2c by Molmil
Crystal Structure of Anoxybacillus Alpha-amylase Provides Insights into a New Glycosyl Hydrolase Subclass
Descriptor: ALPHA-AMYLASE, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Ng, C.L, Chai, K.P, Othman, N.F, Teh, A.H, Ho, K.L, Chan, K.G, Goh, K.M.
Deposit date:2015-05-17
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Anoxybacillus Alpha-Amylase Provides Insights Into Maltose Binding of a New Glycosyl Hydrolase Subclass.
Sci.Rep., 6, 2016
8Q5W
DownloadVisualize
BU of 8q5w by Molmil
MgADP-bound Fe protein of the molybdenum nitrogenase from Methanocaldococcus infernus
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 291, 2024
8QAB
DownloadVisualize
BU of 8qab by Molmil
X-ray crystal structure of a de novo designed antiparallel coiled-coil hexameric alpha-helical barrel with 4 heptad repeats, apCCHex
Descriptor: 1-methoxy-2-[2-[2-[2-[2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethane, apCCHex
Authors:Naudin, E.N, Albanese, K.I, Petrenas, R, Woolfson, D.N.
Deposit date:2023-08-22
Release date:2024-07-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Rationally seeded computational protein design of ɑ-helical barrels.
Nat.Chem.Biol., 20, 2024
8QAD
DownloadVisualize
BU of 8qad by Molmil
X-ray crystal structure of a de novo designed single-chain antiparallel 6-helix coiled-coil alpha-helical barrel, sc-apCC-6-LLIA
Descriptor: DODECAETHYLENE GLYCOL, sc-apCC-6-LLIA
Authors:Albanese, K.I, Petrenas, R, Woolfson, D.N.
Deposit date:2023-08-22
Release date:2024-07-03
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Rationally seeded computational protein design of ɑ-helical barrels.
Nat.Chem.Biol., 20, 2024
8QAC
DownloadVisualize
BU of 8qac by Molmil
X-ray crystal structure of a de novo designed antiparallel coiled-coil 8-helix bundle with 4 heptad repeats, antiparallel 8-helix bundle-GLIA
Descriptor: antiparallel 8-helix bundle-GLIA
Authors:Albanese, K.I, Dawson, W.M, Petrenas, R, Woolfson, D.N.
Deposit date:2023-08-22
Release date:2024-07-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Rationally seeded computational protein design of ɑ-helical barrels.
Nat.Chem.Biol., 20, 2024

238582

건을2025-07-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon