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8OTB
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BU of 8otb by Molmil
Clostridium perfringens chitinase CP4_3455
Descriptor: CHLORIDE ION, Chitodextrinase, DI(HYDROXYETHYL)ETHER, ...
Authors:Bloch, Y, Savvides, S.N.
Deposit date:2023-04-20
Release date:2023-07-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Clostridium perfringens chitinase CP4_3455
To Be Published
3AUV
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BU of 3auv by Molmil
Predicting Amino Acid Preferences in the Complementarity Determining Regions of an Antibody-Antigen Recognition Interface
Descriptor: sc-dsFv derived from the G6-Fab
Authors:Yu, C.M, Peng, H.P, Chen, I.C, Lee, Y.C, Chen, J.B, Tsai, K.C, Chen, C.T, Chang, J.Y, Yang, E.W, Hsu, P.C, Jian, J.W, Hsu, H.J, Chang, H.J, Hsu, W.L, Huang, K.F, Ma, A.C, Yang, A.S.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2012-04-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rationalization and design of the complementarity determining region sequences in an antibody-antigen recognition interface
Plos One, 7, 2012
1FL0
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BU of 1fl0 by Molmil
CRYSTAL STRUCTURE OF THE EMAP2/RNA-BINDING DOMAIN OF THE P43 PROTEIN FROM HUMAN AMINOACYL-TRNA SYNTHETASE COMPLEX
Descriptor: ENDOTHELIAL-MONOCYTE ACTIVATING POLYPEPTIDE II
Authors:Renault, L, Kerjan, P, Pasqualato, S, Menetrey, J, Robinson, J.-C, Kawaguchi, S, Vassylyev, D.G, Yokoyama, S, Mirande, M, Cherfils, J.
Deposit date:2000-08-11
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the EMAPII domain of human aminoacyl-tRNA synthetase complex reveals evolutionary dimer mimicry.
EMBO J., 20, 2001
2F3T
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BU of 2f3t by Molmil
Crystal Structure Of E.coli Guanylate Kinase In Complex With Ganciclovir monophosphate
Descriptor: Guanylate kinase, N9-1-HYDROXY-PROP-2-OXYMETHYL-GUANINE-3'-MONOPHOSPHATE
Authors:Hible, G, Cherfils, J.
Deposit date:2005-11-22
Release date:2006-05-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Crystal structures of GMP kinase in complex with ganciclovir monophosphate and Ap5G.
Biochimie, 88, 2006
2F3R
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BU of 2f3r by Molmil
Crystal Structure Of E.coli Guanylate Kinase In Complex With Ap5G
Descriptor: Guanylate kinase, P1-(5'-ADENOSYL)-P5-(5'-GUANOSYL) PENTAPHOSPHATE
Authors:Hible, G, Cherfils, J.
Deposit date:2005-11-22
Release date:2006-05-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of GMP kinase in complex with ganciclovir monophosphate and Ap5G.
Biochimie, 88, 2006
3IQ6
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BU of 3iq6 by Molmil
Crystal structure of a tetrameric Zn-bound cytochrome cb562 complex with covalently and non-covalently stabilized interfaces
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ZINC ION
Authors:Brodin, J.N, Tezcan, F.A.
Deposit date:2009-08-19
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Evolution of metal selectivity in templated protein interfaces.
J.Am.Chem.Soc., 132, 2010
3VOW
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BU of 3vow by Molmil
Crystal Structure of the Human APOBEC3C having HIV-1 Vif-binding Interface
Descriptor: CHLORIDE ION, Probable DNA dC->dU-editing enzyme APOBEC-3C, ZINC ION
Authors:Kitamura, S, Suzuki, A, Watanabe, N, Iwatani, Y.
Deposit date:2012-02-22
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The APOBEC3C crystal structure and the interface for HIV-1 Vif binding.
Nat.Struct.Mol.Biol., 19, 2012
3C3T
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BU of 3c3t by Molmil
Role of a Glutamate Bridge Spanning the Dimeric Interface of Human Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, SULFATE ION, Superoxide dismutase [Mn]
Authors:Quint, P.S, Domsic, J.F, Cabelli, D.E, McKenna, R, Silverman, D.N.
Deposit date:2008-01-28
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Role of a glutamate bridge spanning the dimeric interface of human manganese superoxide dismutase.
Biochemistry, 47, 2008
3SXU
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BU of 3sxu by Molmil
Structure of the E. coli SSB-DNA polymerase III interface
Descriptor: DNA polymerase III subunit chi, DNA polymerase III subunit psi, SSB peptide
Authors:Marceau, A.H, Keck, J.L.
Deposit date:2011-07-15
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the SSB-DNA polymerase III interface and its role in DNA replication.
Embo J., 30, 2011
4B4N
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BU of 4b4n by Molmil
CPSF6 defines a conserved capsid interface that modulates HIV-1 replication
Descriptor: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6, GAG PROTEIN
Authors:Price, A.J, James, L.C.
Deposit date:2012-07-31
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.813 Å)
Cite:Cpsf6 Defines a Conserved Capsid Interface that Modulates HIV-1 Replication.
Plos Pathog., 8, 2012
3M79
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BU of 3m79 by Molmil
A tetrameric Zn-bound cytochrome cb562 complex with covalently and non-covalently stabilized interfaces crystallized in the presence of Cu(II) and Zn(II)
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ZINC ION
Authors:Brodin, J.D, Tezcan, F.A.
Deposit date:2010-03-16
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Evolution of metal selectivity in templated protein interfaces.
J.Am.Chem.Soc., 132, 2010
1R9F
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BU of 1r9f by Molmil
Crystal structure of p19 complexed with 19-bp small interfering RNA
Descriptor: 5'-R(*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3', 5'-R(*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3', Core protein P19, ...
Authors:Ye, K, Malinina, L, Patel, D.J.
Deposit date:2003-10-28
Release date:2004-01-27
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Recognition of small interfering RNA by a viral suppressor of RNA
Nature, 426, 2003
4LC5
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BU of 4lc5 by Molmil
Structural basis of substrate specificity of CDA superfamily guanine deaminase
Descriptor: 1,2-ETHANEDIOL, 9-METHYLGUANINE, Cytidine and deoxycytidylate deaminase zinc-binding region, ...
Authors:Bitra, A, Biswas, A, Anand, R.
Deposit date:2013-06-21
Release date:2014-01-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
1UR5
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BU of 1ur5 by Molmil
Stabilization of a Tetrameric Malate Dehydrogenase by Introduction of a Disulfide Bridge at the Dimer/Dimer Interface
Descriptor: CADMIUM ION, CHLORIDE ION, MALATE DEHYDROGENASE, ...
Authors:Bjork, A, Dalhus, B, Mantzilas, D, Eijsink, V.G.H, Sirevag, R.
Deposit date:2003-10-27
Release date:2003-11-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Stabilization of a Tetrameric Malate Dehydrogenase by Introduction of a Disulfide Bridge at the Dimer-Dimer Interface
J.Mol.Biol., 334, 2003
2Q1E
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BU of 2q1e by Molmil
Altered dimer interface decreases stability in an amyloidogenic kappa1 Bence Jones protein.
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-09, SULFATE ION
Authors:Thompson, J.R, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2007-05-24
Release date:2008-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem., 283, 2008
2RB5
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BU of 2rb5 by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
Descriptor: MAGNESIUM ION, Putative uncharacterized protein, trioxido(oxo)tungsten
Authors:Lu, Z, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2007-09-18
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RAR
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BU of 2rar by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
Descriptor: MAGNESIUM ION, Putative uncharacterized protein, oxido(dioxo)vanadium
Authors:Lu, Z, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2007-09-17
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RAV
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BU of 2rav by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
Descriptor: MAGNESIUM ION, Putative uncharacterized protein, trioxido(oxo)tungsten
Authors:Lu, Z, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2007-09-17
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RBK
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BU of 2rbk by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
Descriptor: MAGNESIUM ION, Putative uncharacterized protein, oxido(dioxo)vanadium
Authors:Lu, Z, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2007-09-19
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1ORO
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BU of 1oro by Molmil
A FLEXIBLE LOOP AT THE DIMER INTERFACE IS A PART OF THE ACTIVE SITE OF THE ADJACENT MONOMER OF ESCHERICHIA COLI OROTATE PHOSPHORIBOSYLTRANSFERASE
Descriptor: OROTATE PHOSPHORIBOSYLTRANSFERASE, SULFATE ION
Authors:Henriksen, A, Aghajari, N, Jensen, K.F, Gajhede, M.
Deposit date:1995-09-11
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A flexible loop at the dimer interface is a part of the active site of the adjacent monomer of Escherichia coli orotate phosphoribosyltransferase.
Biochemistry, 35, 1996
3Q3F
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BU of 3q3f by Molmil
Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin into position 103 of Barnase
Descriptor: Ribonuclease/Ubiquitin chimeric protein, SULFATE ION
Authors:Ha, J.-H, Karchin, J.M, Walker-Kopp, N, Huang, L.-S, Berry, E.A, Loh, S.N.
Deposit date:2010-12-21
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Engineering domain-swapped binding interfaces by mutually exclusive folding.
J.Mol.Biol., 416, 2012
2BD1
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BU of 2bd1 by Molmil
A possible role of the second calcium ion in interfacial binding: Atomic and medium resolution crystal structures of the quadruple mutant of phospholipase A2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Phospholipase A2
Authors:Sekar, K, Velmurugan, D, Tsai, M.D.
Deposit date:2005-10-19
Release date:2006-07-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr.,Sect.D, 62, 2006
2BCN
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BU of 2bcn by Molmil
Solvent isotope effects on interfacial protein electron transfer between cytochrome c and cytochrome c peroxidase
Descriptor: Cytochrome c iso-1, HEME C, PROTOPORPHYRIN IX CONTAINING ZN, ...
Authors:Kang, S.A, Crane, B.R.
Deposit date:2005-10-19
Release date:2006-02-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Solvent isotope effects on interfacial protein electron transfer in crystals and electrode films.
J.Am.Chem.Soc., 128, 2006
5TGL
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BU of 5tgl by Molmil
A MODEL FOR INTERFACIAL ACTIVATION IN LIPASES FROM THE STRUCTURE OF A FUNGAL LIPASE-INHIBITOR COMPLEX
Descriptor: LIPASE, N-HEXYLPHOSPHONATE ETHYL ESTER
Authors:Brzozowski, A.M, Derewenda, U, Derewenda, Z.S, Dodson, G.G, Lawson, D, Turkenburg, J.P, Bjorkling, F, Huge-Jensen, B, Patkar, S.R, Thim, L.
Deposit date:1991-10-30
Release date:1994-01-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:A model for interfacial activation in lipases from the structure of a fungal lipase-inhibitor complex.
Nature, 351, 1991
2BCH
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BU of 2bch by Molmil
A possible of Second calcium ion in interfacial binding: Atomic and Medium resolution crystal structures of the quadruple mutant of phospholipase A2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Sekar, K, Yogavel, M, Velmurugan, D, Poi, M.J, Dauter, Z, Tsai, M.D.
Deposit date:2005-10-19
Release date:2006-07-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr.,Sect.D, 62, 2006

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