Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8A6C
DownloadVisualize
BU of 8a6c by Molmil
1 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gruhl, T, Weinert, T, Rodrigues, M.J, Milne, C.J, Ortolani, G, Nass, K, Nango, E, Sen, S, Johnson, P.J.M, Cirelli, C, Furrer, A, Mous, S, Skopintsev, P, James, D, Dworkowski, F, Baath, P, Kekilli, D, Oserov, D, Tanaka, R, Glover, H, Bacellar, C, Bruenle, S, Casadei, C.M, Diethelm, A.D, Gashi, D, Gotthard, G, Guixa-Gonzalez, R, Joti, Y, Kabanova, V, Knopp, G, Lesca, E, Ma, P, Martiel, I, Muehle, J, Owada, S, Pamula, F, Sarabi, D, Tejero, O, Tsai, C.J, Varma, N, Wach, A, Boutet, S, Tono, K, Nogly, P, Deupi, X, Iwata, S, Neutze, R, Standfuss, J, Schertler, G.F.X, Panneels, V.
Deposit date:2022-06-17
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural changes direct the first molecular events of vision.
Nature, 615, 2023
7ZBE
DownloadVisualize
BU of 7zbe by Molmil
Dark state crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SwissFEL)
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gruhl, T, Weinert, T, Rodrigues, M.J, Milne, C, Ortolani, G, Nass, K, Nango, E, Sen, S, Johnson, P, Cirelli, C, Furrer, A, Mous, S, Skopintsev, P, James, D, Dworkowski, F, Baath, P, Kekilli, D, Oserov, D, Tanaka, R, Glover, H, Bacellar, C, Bruenle, S, Casadei, C, Diethelm, A, Gashi, D, Gotthard, G, Guixa-Gonzalez, R, Joti, Y, Kabanova, V, Knopp, G, Lesca, E, Ma, P, Martiel, I, Muehle, J, Owada, S, Pamula, F, Sarabi, D, Tejero, O, Tsai, C.J, Varma, N, Wach, A, Boutet, S, Tono, K, Nogly, P, Deupi, X, Iwata, S, Neutze, R, Standfuss, J, Schertler, G.F.X, Panneels, V.
Deposit date:2022-03-23
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural changes direct the first molecular events of vision.
Nature, 615, 2023
4QBN
DownloadVisualize
BU of 4qbn by Molmil
VRR_NUC domain
Descriptor: Nuclease, SULFATE ION
Authors:Smerdon, S.J, Pennell, S, Li, J.
Deposit date:2014-05-08
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:FAN1 activity on asymmetric repair intermediates is mediated by an atypical monomeric virus-type replication-repair nuclease domain.
Cell Rep, 8, 2014
3FJQ
DownloadVisualize
BU of 3fjq by Molmil
Crystal structure of cAMP-dependent protein kinase catalytic subunit alpha in complex with peptide inhibitor PKI alpha (6-25)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Kim, C.
Deposit date:2008-12-15
Release date:2009-08-04
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Comparative surface geometry of the protein kinase family.
Protein Sci., 18, 2009
6I15
DownloadVisualize
BU of 6i15 by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 11
Descriptor: 1,2-ETHANEDIOL, 1-[[2,2-bis(fluoranyl)-1,3-benzodioxol-5-yl]methyl]-~{N}-methyl-2-oxidanylidene-pyridine-3-carboxamide, ACETATE ION, ...
Authors:Schuettelkopf, A.W.
Deposit date:2018-10-27
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019
5UPK
DownloadVisualize
BU of 5upk by Molmil
CDC42 binds PAK4 via an extended GTPase-effector interface - 3 peptide: PAK4cat, PAK4-N45, CDC42
Descriptor: Cell division control protein 42 homolog, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Ha, B.H, Boggon, T.J.
Deposit date:2017-02-03
Release date:2017-12-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CDC42 binds PAK4 via an extended GTPase-effector interface.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6I0Z
DownloadVisualize
BU of 6i0z by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 1
Descriptor: Fascin, ~{N}-(2,4-dichlorophenyl)-~{N}-methyl-ethanamide
Authors:Schuettelkopf, A.W.
Deposit date:2018-10-27
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019
6I16
DownloadVisualize
BU of 6i16 by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 15
Descriptor: 6-[(3,4-dichlorophenyl)methyl]-~{N}-(1-methylpyrazol-4-yl)-5-oxidanylidene-1,6-naphthyridine-8-carboxamide, ACETATE ION, Fascin
Authors:Schuettelkopf, A.W.
Deposit date:2018-10-27
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019
6I13
DownloadVisualize
BU of 6i13 by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 7
Descriptor: 1,2-ETHANEDIOL, 2-[(3-chlorophenyl)methyl]-~{N}-(1-methylpyrazol-4-yl)-1-oxidanylidene-isoquinoline-4-carboxamide, ACETATE ION, ...
Authors:Schuettelkopf, A.W.
Deposit date:2018-10-27
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019
6KYK
DownloadVisualize
BU of 6kyk by Molmil
Crystal structure of Shank3 NTD-ANK mutant in complex with Rap1
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rap-1b, ...
Authors:Cai, Q, Zhang, M.
Deposit date:2019-09-19
Release date:2019-12-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Shank3 Binds to and Stabilizes the Active Form of Rap1 and HRas GTPases via Its NTD-ANK Tandem with Distinct Mechanisms.
Structure, 28, 2020
3FF8
DownloadVisualize
BU of 3ff8 by Molmil
Structure of NK cell receptor KLRG1 bound to E-cadherin
Descriptor: CALCIUM ION, Epithelial cadherin, Killer cell lectin-like receptor subfamily G member 1
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2008-12-02
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of natural killer cell receptor KLRG1 bound to E-cadherin reveals basis for MHC-independent missing self recognition.
Immunity, 31, 2009
4QBO
DownloadVisualize
BU of 4qbo by Molmil
VRR_NUC domain
Descriptor: MAGNESIUM ION, Nuclease
Authors:Smerdon, S.J, Pennell, S, Li, J.
Deposit date:2014-05-08
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:FAN1 activity on asymmetric repair intermediates is mediated by an atypical monomeric virus-type replication-repair nuclease domain.
Cell Rep, 8, 2014
3EGG
DownloadVisualize
BU of 3egg by Molmil
Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1) and the PP1 binding and PDZ domains of Spinophilin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MANGANESE (II) ION, ...
Authors:Ragusa, M.J, Page, R, Peti, W.
Deposit date:2008-09-10
Release date:2010-03-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.
Nat.Struct.Mol.Biol., 17, 2010
3JBX
DownloadVisualize
BU of 3jbx by Molmil
Cryo-electron microscopy structure of RAG Signal End Complex (C2 symmetry)
Descriptor: 5'-D(*CP*AP*CP*AP*GP*TP*GP*CP*TP*AP*CP*AP*GP*AP*C)-3', 5'-D(*GP*CP*GP*AP*TP*GP*GP*TP*TP*AP*AP*CP*CP*A)-3', 5'-D(P*GP*TP*CP*TP*GP*TP*AP*GP*CP*AP*CP*TP*GP*TP*G)-3', ...
Authors:Ru, H, Chambers, M.G, Fu, T.-M, Tong, A.B, Liao, M, Wu, H.
Deposit date:2015-10-22
Release date:2015-12-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
Cell(Cambridge,Mass.), 163, 2015
8YRC
DownloadVisualize
BU of 8yrc by Molmil
Chlorinated YabJ from Staphylococcus aureus
Descriptor: CHLORIDE ION, OXYGEN ATOM, SODIUM ION, ...
Authors:Jeong, C, Kim, H.J.
Deposit date:2024-03-21
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:YabJ from Staphylococcus aureus entraps chlorides within its pocket.
Biochem.Biophys.Res.Commun., 710, 2024
3JBW
DownloadVisualize
BU of 3jbw by Molmil
Cryo-electron microscopy structure of RAG Paired Complex (with NBD, no symmetry)
Descriptor: 12-RSS signal end forward strand, 5'-D(P*GP*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3', Nicked 12-RSS intermediate reverse strand, ...
Authors:Ru, H, Chambers, M.G, Fu, T.-M, Tong, A.B, Liao, M, Wu, H.
Deposit date:2015-10-21
Release date:2015-12-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
Cell(Cambridge,Mass.), 163, 2015
3JZ7
DownloadVisualize
BU of 3jz7 by Molmil
Crystal structure of the extracellular domains of coxsackie & adenovirus receptor from mouse (mCAR)
Descriptor: Coxsackievirus and adenovirus receptor homolog, ISOPROPYL ALCOHOL
Authors:Max, K.E.A, Heinemann, U.
Deposit date:2009-09-23
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The coxsackievirus-adenovirus receptor reveals complex homophilic and heterophilic interactions on neural cells.
J.Neurosci., 30, 2010
8YF1
DownloadVisualize
BU of 8yf1 by Molmil
Cryo-EM structure of human SV2A in complex with Brivaracetam
Descriptor: (2S)-2-[(4R)-2-oxidanylidene-4-propyl-pyrrolidin-1-yl]butanamide, Synaptic vesicle glycoprotein 2A
Authors:Qu, Q, Liu, S, Zhou, Z.
Deposit date:2024-02-23
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Cryo-EM structure of human SV2A in complex with Brivaracetam
To Be Published
8YF0
DownloadVisualize
BU of 8yf0 by Molmil
Cryo-EM structure of human SV2A
Descriptor: Synaptic vesicle glycoprotein 2A
Authors:Qu, Q, Liu, S, Zhou, Z.
Deposit date:2024-02-23
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Cryo-EM structure of human SV2A
To Be Published
8Y84
DownloadVisualize
BU of 8y84 by Molmil
Structure of the high affinity receptor fc(epsilon)ri TM
Descriptor: CHOLESTEROL HEMISUCCINATE, High affinity immunoglobulin epsilon receptor subunit alpha, High affinity immunoglobulin epsilon receptor subunit beta, ...
Authors:Du, S, Deng, M.J, Xiao, J.Y.
Deposit date:2024-02-05
Release date:2024-07-10
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural insights into the high-affinity IgE receptor Fc epsilon RI complex.
Nature, 633, 2024
8Z0T
DownloadVisualize
BU of 8z0t by Molmil
Structure of the human ige-fc bound to its high affinity receptor fc(epsilon)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Du, S, Deng, M.J, Xiao, J.Y.
Deposit date:2024-04-10
Release date:2024-07-10
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structural insights into the high-affinity IgE receptor Fc epsilon RI complex.
Nature, 633, 2024
8ZGS
DownloadVisualize
BU of 8zgs by Molmil
Structure of the ige-fc bound to its high affinity receptor fc(epsilon)ri state2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
Authors:Du, S, Deng, M.J, Xiao, J.Y.
Deposit date:2024-05-09
Release date:2024-07-10
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structural insights into the high-affinity IgE receptor Fc epsilon RI complex.
Nature, 633, 2024
8XX0
DownloadVisualize
BU of 8xx0 by Molmil
Crystal structure of anti-IgE antibody HMK-12 Fab complexed with IgE F(ab')2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SPE7 immunoglobulin E F(ab')2 heavy chain, ...
Authors:Hirano, T, Koyanagi, A, Kasai, M, Okumura, K.
Deposit date:2024-01-17
Release date:2024-07-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Allosteric inhibition of IgE-Fc epsilon RI interactions by simultaneous targeting of IgE F(ab')2 epitopes.
Commun Biol, 7, 2024
8ZGT
DownloadVisualize
BU of 8zgt by Molmil
Structure of the ige-fc bound to its high affinity receptor fc(epsilon)ri state3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
Authors:Du, S, Deng, M.J, Xiao, J.Y.
Deposit date:2024-05-09
Release date:2024-07-10
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural insights into the high-affinity IgE receptor Fc epsilon RI complex.
Nature, 633, 2024
9AWK
DownloadVisualize
BU of 9awk by Molmil
Bovine fetal muscle nAChR resting state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H, Hibbs, R.E.
Deposit date:2024-03-05
Release date:2024-07-31
Last modified:2024-09-18
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Structural switch in acetylcholine receptors in developing muscle.
Nature, 632, 2024

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon