7ZBE

Dark state crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SwissFEL)

Summary for 7ZBE

• Entry DOI: 10.2210/pdb7zbe/pdb
• Descriptor: Rhodopsin, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL GROUP, ... (9 entities in total)
• Functional Keywords: gpcr, opsin, xfel, membrane protein
• Biological source: Bos taurus (cattle)
• Total number of polymer chains: 2
• Total formula weight: 85359.30

Authors

Gruhl, T.,Weinert, T.,Rodrigues, M.J.,Milne, C.,Ortolani, G.,Nass, K.,Nango, E.,Sen, S.,Johnson, P.,Cirelli, C.,Furrer, A.,Mous, S.,Skopintsev, P.,James, D.,Dworkowski, F.,Baath, P.,Kekilli, D.,Oserov, D.,Tanaka, R.,Glover, H.,Bacellar, C.,Bruenle, S.,Casadei, C.,Diethelm, A.,Gashi, D.,Gotthard, G.,Guixa-Gonzalez, R.,Joti, Y.,Kabanova, V.,Knopp, G.,Lesca, E.,Ma, P.,Martiel, I.,Muehle, J.,Owada, S.,Pamula, F.,Sarabi, D.,Tejero, O.,Tsai, C.J.,Varma, N.,Wach, A.,Boutet, S.,Tono, K.,Nogly, P.,Deupi, X.,Iwata, S.,Neutze, R.,Standfuss, J.,Schertler, G.F.X.,Panneels, V. (deposition date: 2022-03-23, release date: 2023-03-29, Last modification date: 2024-02-07)

• Primary citation: Gruhl, T.,Weinert, T.,Rodrigues, M.J.,Milne, C.J.,Ortolani, G.,Nass, K.,Nango, E.,Sen, S.,Johnson, P.J.M.,Cirelli, C.,Furrer, A.,Mous, S.,Skopintsev, P.,James, D.,Dworkowski, F.,Bath, P.,Kekilli, D.,Ozerov, D.,Tanaka, R.,Glover, H.,Bacellar, C.,Brunle, S.,Casadei, C.M.,Diethelm, A.D.,Gashi, D.,Gotthard, G.,Guixa-Gonzalez, R.,Joti, Y.,Kabanova, V.,Knopp, G.,Lesca, E.,Ma, P.,Martiel, I.,Muhle, J.,Owada, S.,Pamula, F.,Sarabi, D.,Tejero, O.,Tsai, C.J.,Varma, N.,Wach, A.,Boutet, S.,Tono, K.,Nogly, P.,Deupi, X.,Iwata, S.,Neutze, R.,Standfuss, J.,Schertler, G.,Panneels, V.; Ultrafast structural changes direct the first molecular events of vision.; Nature, 615:939-944, 2023; PubMed: 36949205; DOI: 10.1038/s41586-023-05863-6

Experimental method

X-RAY DIFFRACTION (1.8 Å)