7ZBE
Dark state crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SwissFEL)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | FREE ELECTRON LASER |
| Source details | SwissFEL ARAMIS BEAMLINE ESA |
| Synchrotron site | SwissFEL ARAMIS |
| Beamline | ESA |
| Temperature [K] | 294 |
| Detector technology | PIXEL |
| Collection date | 2020-07-24 |
| Detector | PSI JUNGFRAU 1M |
| Wavelength(s) | 1.38 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 61.510, 91.010, 151.110 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 16.100 - 1.800 |
| R-factor | 0.215 |
| Rwork | 0.215 |
| R-free | 0.24740 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1u19 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 0.912 |
| Data reduction software | CrystFEL |
| Data scaling software | CrystFEL |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 16.100 | 1.860 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Number of reflections | 79305 | 7852 |
| <I/σ(I)> | 7.62 | 0.95 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 830.6 | 556.7 |
| CC(1/2) | 0.993 | 0.993 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | LIPIDIC CUBIC PHASE | 9 | 294 | 36 % PEG 600, 100 mM Bicine pH 9.0 |






