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4O0Y
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BU of 4o0y by Molmil
Back pocket flexibility provides group-II PAK selectivity for type 1 kinase inhibitors
Descriptor: 4-[1-(4-amino-1,3,5-triazin-2-yl)-2-(ethylamino)-1H-benzimidazol-6-yl]-2-methylbut-3-yn-2-ol, Serine/threonine-protein kinase PAK 4
Authors:Rouge, L, Tam, C, Wang, W.
Deposit date:2013-12-14
Release date:2014-02-12
Last modified:2014-02-26
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Back Pocket Flexibility Provides Group II p21-Activated Kinase (PAK) Selectivity for Type I 1/2 Kinase Inhibitors.
J.Med.Chem., 57, 2014
7KX6
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BU of 7kx6 by Molmil
Crystal structure of DCLK1-KD in complex with XMD8-85
Descriptor: 2-{[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]amino}-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Serine/threonine-protein kinase DCLK1
Authors:Patel, O, Lucet, I.
Deposit date:2020-12-03
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for small molecule targeting of Doublecortin Like Kinase 1 with DCLK1-IN-1.
Commun Biol, 4, 2021
6JMW
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BU of 6jmw by Molmil
Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan
Descriptor: (2S)-2-[[(1R,4aR,4bR,10aR)-1,4a-dimethyl-7-propan-2-yl-2,3,4,4b,5,6,10,10a-octahydrophenanthren-1-yl]carbonylamino]-3-( 1H-indol-3-yl)propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, Chromium Protoporphyrin IX, ...
Authors:Stanfield, J.K, Omura, K, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O.
Deposit date:2019-03-13
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystals in Minutes: Instant On-Site Microcrystallisation of Various Flavours of the CYP102A1 (P450BM3) Haem Domain.
Angew.Chem.Int.Ed.Engl., 59, 2020
5YCI
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BU of 5yci by Molmil
Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly)
Descriptor: Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly), PROTOPORPHYRIN IX CONTAINING FE
Authors:Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Nakagawa, T, Tsuneshige, A, Shirai, T.
Deposit date:2017-09-07
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Tracing whale myoglobin evolution by resurrecting ancient proteins.
Sci Rep, 8, 2018
4O1T
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BU of 4o1t by Molmil
Crystal structure of murine neuroglobin mutant F106W
Descriptor: Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Avella, G, Savino, C, Vallone, B.
Deposit date:2013-12-16
Release date:2014-06-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering the internal cavity of neuroglobin demonstrates the role of the haem-sliding mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
6CGB
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BU of 6cgb by Molmil
chimera of mouse cadherin-11 EC1 and mouse cadherin-6 EC2
Descriptor: ACETATE ION, CALCIUM ION, Cadherin-11, ...
Authors:Brasch, J, Harrison, O.J, Shapiro, L, Kaeser, B.
Deposit date:2018-02-19
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
7SUU
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BU of 7suu by Molmil
Crystal Structure of Mouse Cadherin-23 EC25-26
Descriptor: CALCIUM ION, CHLORIDE ION, Cadherin-23, ...
Authors:Boyer, M.D, Sandhu, J.S, Sotomayor, M.
Deposit date:2021-11-18
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Crystal Structure of Mouse Cadherin-23 EC25-26
to be published
7TEF
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BU of 7tef by Molmil
Cytochrome P450 14 alpha-sterol demethylase CYP51 from Mycobacterium marinum
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cytochrome P450 51B1 Cyp51B1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mohamed, H.A, Bruning, J.B, Bell, S.G.
Deposit date:2022-01-04
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A comparison of the bacterial CYP51 cytochrome P450 enzymes from Mycobacterium marinum and Mycobacterium tuberculosis.
J.Steroid Biochem.Mol.Biol., 221, 2022
6CH5
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BU of 6ch5 by Molmil
Dehaloperoxidase B in complex with substrate 4-Nitroguaiacol
Descriptor: 2-methoxy-4-nitrophenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase B, ...
Authors:de Serrano, V.S, Carey, L.M, Ghiladi, R.A.
Deposit date:2018-02-21
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
7KFM
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BU of 7kfm by Molmil
Room temperature oxyferrous Dehaloperoxidase B
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, Dehaloperoxidase B, OXYGEN MOLECULE, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2020-10-14
Release date:2021-10-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Complementarity of neutron, XFEL and synchrotron crystallography for defining the structures of metalloenzymes at room temperature.
Iucrj, 9, 2022
6JR3
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BU of 6jr3 by Molmil
Crystal structure of insulin hexamer fitted into cryo EM density map where each dimer was kept as rigid body
Descriptor: Insulin A chain, Insulin B chain
Authors:Sengupta, J, Pathak, B.K, Bhakta, S.
Deposit date:2019-04-02
Release date:2020-04-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (14.5 Å)
Cite:Resveratrol as a nontoxic excipient stabilizes insulin in a bioactive hexameric form.
J.Comput.Aided Mol.Des., 34, 2020
7T1F
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BU of 7t1f by Molmil
Crystal structure of GDP-bound T50I mutant of human KRAS4B
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION
Authors:Zhang, Y, Zhang, C.
Deposit date:2021-12-01
Release date:2022-12-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional analyses of a germline KRAS T50I mutation provide insights into Raf activation.
JCI Insight, 8, 2023
6IXD
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BU of 6ixd by Molmil
X-ray crystal structure of bPI-11 hiv-1 protease complex
Descriptor: (4R)-3-[(2S,3S)-3-[2-[4-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-2,6-dimethyl-phenoxy]ethanoylamino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-N-[(1S,2R)-2-oxidanyl-2,3-dihydro-1H-inden-1-yl]-1,3-thiazolidine-4-carboxamide, CHLORIDE ION, GLYCEROL, ...
Authors:Adachi, M, Hidaka, K.
Deposit date:2018-12-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Acquired Removability of Aspartic Protease Inhibitors by Direct Biotinylation.
Bioconjug.Chem., 30, 2019
5YM3
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BU of 5ym3 by Molmil
CYP76AH1-4pi from salvia miltiorrhiza
Descriptor: 4-PHENYL-1H-IMIDAZOLE, Ferruginol synthase, MANGANESE (II) ION, ...
Authors:Chang, Z.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Crystal structure of CYP76AH1 in 4-PI-bound state from Salvia miltiorrhiza.
Biochem.Biophys.Res.Commun., 511, 2019
5U1Q
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BU of 5u1q by Molmil
Grb7-SH2 with bicyclic peptide inhibitor
Descriptor: CHLORIDE ION, Growth factor receptor-bound protein 7, LYS-PHE-GLU-GLY-TYR-ASP-ASN-GLU-CST
Authors:Watson, G.M, Wilce, M.C.J, Wilce, J.A.
Deposit date:2016-11-28
Release date:2017-11-15
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery, Development, and Cellular Delivery of Potent and Selective Bicyclic Peptide Inhibitors of Grb7 Cancer Target.
J. Med. Chem., 60, 2017
6CIZ
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BU of 6ciz by Molmil
Human Cytochrome P450 17A1 in complex with inhibitor: abiraterone C6 nitrile
Descriptor: 6-cyano-17-(3-pyridyl)-androst-5,16-dien-3-ol, PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase
Authors:Scott, E.E, Fehl, C.
Deposit date:2018-02-25
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structure-Based Design of Inhibitors with Improved Selectivity for Steroidogenic Cytochrome P450 17A1 over Cytochrome P450 21A2.
J. Med. Chem., 61, 2018
6CJW
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BU of 6cjw by Molmil
Crystal Structure of Mnk2-D228G in Complex With Inhibitor
Descriptor: 3-(pyridin-4-yl)imidazo[1,2-b]pyridazine, MAP kinase-interacting serine/threonine-protein kinase 2, ZINC ION
Authors:Han, Q.
Deposit date:2018-02-27
Release date:2018-05-09
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Structure-based Design of Pyridone-Aminal eFT508 Targeting Dysregulated Translation by Selective Mitogen-activated Protein Kinase Interacting Kinases 1 and 2 (MNK1/2) Inhibition.
J. Med. Chem., 61, 2018
6CK2
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BU of 6ck2 by Molmil
Insulin analog containing a YB26W mutation
Descriptor: CHLORIDE ION, Insulin A chain, Insulin B chain, ...
Authors:Rege, N.K, Yee, V.C, Weiss, M.A.
Deposit date:2018-02-27
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-based stabilization of insulin as a therapeutic protein assembly via enhanced aromatic-aromatic interactions.
J. Biol. Chem., 293, 2018
6CKE
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BU of 6cke by Molmil
Dehaloperoxidase B in complex with 4-Br-guaiacol
Descriptor: 4-bromo-2-methoxyphenol, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2018-02-27
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
6CSW
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BU of 6csw by Molmil
Crystal Structure of the Human vaccinia-related kinase bound to a N-methyl-N-propyl-dihydropteridine inhibitor
Descriptor: (7R)-5-butyl-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7,8-dimethyl-7,8-dihydropteridin-6(5H)-one, ACETATE ION, CHLORIDE ION, ...
Authors:dos Reis, C.V, de Souza, G.P, Counago, R.M, Chiodi, C.G, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
Deposit date:2018-03-21
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of the Human vaccinia-related kinase bound to a N-methyl-N-propyl-dihydropteridine inhibitor
To Be Published
8ELU
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BU of 8elu by Molmil
HRAS R97G Crystal form 1
Descriptor: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
Authors:Johnson, C.W, Rodrigues, J.A, Mattos, C.
Deposit date:2022-09-26
Release date:2023-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Allosteric site variants affect GTP hydrolysis on Ras.
Protein Sci., 32, 2023
5YIC
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BU of 5yic by Molmil
Crystal Structure of KNI-10333 bound Plasmepsin II (PMII) from Plasmodium falciparum
Descriptor: (4R)-3-[(2S,3S)-3-[[(2R)-2-[2-(4-aminophenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-N-[(1S,2R)-2-oxidanyl-2,3-dihydro-1H-inden-1-yl]-1,3-thiazolidine-4-carboxamide, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, GLYCEROL, ...
Authors:Mishra, V, Rathore, I, Bhaumik, P.
Deposit date:2017-10-03
Release date:2018-07-11
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Deciphering the mechanism of potent peptidomimetic inhibitors targeting plasmepsins - biochemical and structural insights.
Febs J., 285, 2018
8ELW
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BU of 8elw by Molmil
HRAS R97A Crystal Form 1 T-State
Descriptor: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
Authors:Davis, K, Johnson, C.W, Mattos, C.
Deposit date:2022-09-26
Release date:2023-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Allosteric site variants affect GTP hydrolysis on Ras.
Protein Sci., 32, 2023
6CL7
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BU of 6cl7 by Molmil
1.71 A MicroED structure of proteinase K at 0.86 e- / A^2
Descriptor: Proteinase K
Authors:Hattne, J, Shi, D, Glynn, C, Zee, C.-T, Gallagher-Jones, M, Martynowycz, M.W, Rodriguez, J.A, Gonen, T.
Deposit date:2018-03-02
Release date:2018-05-16
Last modified:2023-10-04
Method:ELECTRON CRYSTALLOGRAPHY (1.71 Å)
Cite:Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.
Structure, 26, 2018
5YJ3
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BU of 5yj3 by Molmil
Crystal structure of TZAP and telomeric DNA complex
Descriptor: DNA (5'-D(*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3'), DNA (5'-D(*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3'), Telomere zinc finger-associated protein, ...
Authors:Li, F, Zhao, Y.
Deposit date:2017-10-07
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.845 Å)
Cite:The 11th C2H2 zinc finger and an adjacent C-terminal arm are responsible for TZAP recognition of telomeric DNA.
Cell Res., 28, 2018

223532

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