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3MOZ
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BU of 3moz by Molmil
Structure of the PTP-like phytase from Selenomonas ruminantium in complex with myo-inositol (1,2,3,5,6)pentakisphosphate
Descriptor: (1R,2R,3R,4R,5S,6S)-6-HYDROXYCYCLOHEXANE-1,2,3,4,5-PENTAYL PENTAKIS[DIHYDROGEN (PHOSPHATE)], ACETATE ION, CHLORIDE ION, ...
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2010-04-23
Release date:2011-06-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate binding in protein-tyrosine phosphatase-like inositol polyphosphatases.
J.Biol.Chem., 287, 2012
3MR0
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BU of 3mr0 by Molmil
Crystal Structure of Sensory Box Histidine Kinase/Response Regulator from Burkholderia thailandensis E264
Descriptor: 1,2-ETHANEDIOL, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, Y, Tesar, C, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-04-28
Release date:2010-06-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.493 Å)
Cite:Crystal Structure of Sensory Box Histidine Kinase/Response Regulator from Burkholderia thailandensis E264
To be Published
7RJQ
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BU of 7rjq by Molmil
Crystal structure of human Bromodomain containing protein 4 (BRD4) in complex with ILF3
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, CHLORIDE ION, ...
Authors:Fedorov, E, Islam, K, Ghosh, A.
Deposit date:2021-07-21
Release date:2022-08-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Uncovering the Bromodomain Interactome using Site-Specific Azide-Acetyllysine Photochemistry, Proteomic Profiling and Structural Characterization
To Be Published
7RJM
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BU of 7rjm by Molmil
Crystal structure of human Bromodomain containing protein 3 (BRD3) in complex with ILF3
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 3, Interleukin enhancer-binding factor 3
Authors:Fedorov, E, Islam, K, Ghosh, A.
Deposit date:2021-07-21
Release date:2022-08-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Uncovering the Bromodomain Interactome using Site-Specific Azide-Acetyllysine Photochemistry, Proteomic Profiling and Structural Characterization
Biorxiv, 2021
6QOX
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BU of 6qox by Molmil
Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 27 (Methyl 2-(hydroxymethyl)-6H-thieno[2,3-b]pyrrole-5-carboxylate)
Descriptor: methyl 2-(hydroxymethyl)-6~{H}-thieno[2,3-b]pyrrole-5-carboxylate, tRNA (guanine-N(1)-)-methyltransferase
Authors:Thomas, S.E, Whitehouse, A.J, Coyne, A.G, Abell, C, Mendes, V, Blundell, T.L.
Deposit date:2019-02-12
Release date:2020-02-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Fragment-based discovery of a new class of inhibitors targeting mycobacterial tRNA modification.
Nucleic Acids Res., 48, 2020
8JK0
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BU of 8jk0 by Molmil
Crystal structure of QL-hNTAQ1 C28S
Descriptor: Protein N-terminal glutamine amidohydrolase
Authors:Kang, J.M, Han, B.W.
Deposit date:2023-05-31
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural study for substrate recognition of human N-terminal glutamine amidohydrolase 1 in the arginine N-degron pathway.
Protein Sci., 33, 2024
8RPX
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BU of 8rpx by Molmil
NhoI restriction endonuclease in complex with quadruply methylated DNA target
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*CP*TP*GP*(5CM)P*AP*GP*(5CM)P*TP*C)-3'), ...
Authors:Rafalski, D, Krakowska, K, Gilski, M, Bochtler, M.
Deposit date:2024-01-17
Release date:2024-07-17
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural analysis of the BisI family of modification dependent restriction endonucleases.
Nucleic Acids Res., 52, 2024
7TZ7
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BU of 7tz7 by Molmil
PI3K alpha in complex with an inhibitor
Descriptor: (4S,5R)-3-[2'-amino-2-(morpholin-4-yl)-4'-(trifluoromethyl)[4,5'-bipyrimidin]-6-yl]-4-(hydroxymethyl)-5-methyl-1,3-oxazolidin-2-one, Isoform 3 of Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Knapp, M.S, Tang, J.
Deposit date:2022-02-15
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Identification of NVP-CLR457 as an Orally Bioavailable Non-CNS-Penetrant pan-Class IA Phosphoinositol-3-Kinase Inhibitor.
J.Med.Chem., 65, 2022
8JJX
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BU of 8jjx by Molmil
Crystal structure of QS-hNTAQ1 C28S
Descriptor: Protein N-terminal glutamine amidohydrolase
Authors:Kang, J.M, Han, B.W.
Deposit date:2023-05-31
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural study for substrate recognition of human N-terminal glutamine amidohydrolase 1 in the arginine N-degron pathway.
Protein Sci., 33, 2024
9I0W
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BU of 9i0w by Molmil
Structure of human PD-L1 in complex with clinically evaluated inhibitor
Descriptor: (3~{R})-1-[[7-(iminomethyl)-2-[2-methyl-3-[2-methyl-3-[[3-[[(3~{R})-3-oxidanylpyrrolidin-1-yl]methyl]-1,7-naphthyridin-8-yl]amino]phenyl]phenyl]-1,3-benzoxazol-5-yl]methyl]pyrrolidine-3-carboxylic acid, Programmed cell death 1 ligand 1
Authors:Plewka, J, Golebiowska-Mendroch, K, Slota, A, Magiera-Mularz, K.
Deposit date:2025-01-15
Release date:2025-06-18
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of Clinically Evaluated Small-Molecule Inhibitors of PD-L1 for Immunotherapy.
Acs Med.Chem.Lett., 16, 2025
8JJU
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BU of 8jju by Molmil
Crystal structure of QD-hNTAQ1 C28S
Descriptor: Protein N-terminal glutamine amidohydrolase
Authors:Kang, J.M, Han, B.W.
Deposit date:2023-05-31
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural study for substrate recognition of human N-terminal glutamine amidohydrolase 1 in the arginine N-degron pathway.
Protein Sci., 33, 2024
8JJZ
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BU of 8jjz by Molmil
Crystal structure of QQ-hNTAQ1 C28S
Descriptor: Protein N-terminal glutamine amidohydrolase
Authors:Kang, J.M, Han, B.W.
Deposit date:2023-05-31
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural study for substrate recognition of human N-terminal glutamine amidohydrolase 1 in the arginine N-degron pathway.
Protein Sci., 33, 2024
5G53
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BU of 5g53 by Molmil
Structure of the adenosine A2A receptor bound to an engineered G protein
Descriptor: ADENOSINE RECEPTOR A2A, ENGINEERED DOMAIN OF HUMAN G ALPHA S LONG ISOFORM, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Carpenter, B, Nehme, R, Warne, T, Leslie, A.G.W, Tate, C.G.
Deposit date:2016-05-19
Release date:2016-08-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of the Adenosine A2A Receptor Bound to an Engineered G Protein
Nature, 536, 2016
5J7Q
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BU of 5j7q by Molmil
Macrophage Migration Inhibitory Factor bound to Inhibitor K664 Derivative
Descriptor: 4-(imidazo[1,2-a]pyridin-2-yl)benzene-1,2-diol, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Robertson, M.J, Jorgensen, W.L.
Deposit date:2016-04-06
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Irregularities in enzyme assays: The case of macrophage migration inhibitory factor.
Bioorg.Med.Chem.Lett., 26, 2016
6QWV
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BU of 6qwv by Molmil
SARM1 SAM1-2 domains
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Sporny, M, Isupov, N.M, Opatowsky, Y.
Deposit date:2019-03-06
Release date:2019-07-03
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural Evidence for an Octameric Ring Arrangement of SARM1.
J.Mol.Biol., 431, 2019
1B9Z
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BU of 1b9z by Molmil
BACILLUS CEREUS BETA-AMYLASE COMPLEXED WITH MALTOSE
Descriptor: ACETATE ION, CALCIUM ION, PROTEIN (BETA-AMYLASE), ...
Authors:Mikami, B, Adachi, M, Kage, T, Sarikaya, E, Nanmori, T, Shinke, R, Utsumi, S.
Deposit date:1999-03-06
Release date:1999-03-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of raw starch-digesting Bacillus cereus beta-amylase complexed with maltose.
Biochemistry, 38, 1999
8J4V
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BU of 8j4v by Molmil
Structure of Mycobacterium thermoresistibile NrdI(oxidised) determined at 1.1 angstrom resolution
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, PHOSPHATE ION, ...
Authors:Yadav, L.R, Mande, S.C.
Deposit date:2023-04-21
Release date:2024-10-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Structural insights into the initiation of free radical formation in the Class Ib ribonucleotide reductases in Mycobacteria.
Curr Res Struct Biol, 8, 2024
8S3B
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BU of 8s3b by Molmil
Crystal structure of Medicago truncatula glutamate dehydrogenase 2 in complex with 3-(1H-Tetrazol-5-yl)benzoic acid and NAD
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-(1~{H}-1,2,3,4-tetrazol-5-yl)benzoic acid, ...
Authors:Grzechowiak, M, Ruszkowski, M.
Deposit date:2024-02-19
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Legume-type glutamate dehydrogenase: Structure, activity, and inhibition studies.
Int.J.Biol.Macromol., 278, 2024
8RU4
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BU of 8ru4 by Molmil
Crystal structure of Human Catenin Beta-1 in complex with stitched peptide inhibitor
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Axin-1, CHLORIDE ION, ...
Authors:Yeste Vazquez, A, Klintrot, C.I.R, Grossmann, T.N, Hennig, S.
Deposit date:2024-01-30
Release date:2024-09-04
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure-Based Design of Bicyclic Helical Peptides That Target the Oncogene beta-Catenin.
Angew.Chem.Int.Ed.Engl., 63, 2024
7R0Y
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BU of 7r0y by Molmil
ATAD2 in complex with PepLite-Glu
Descriptor: (2~{S})-2-acetamido-~{N}-prop-2-enyl-pentanediamide, 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, ...
Authors:Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M.
Deposit date:2022-02-02
Release date:2022-11-23
Last modified:2025-10-01
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022
8RT0
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BU of 8rt0 by Molmil
BTV-15 VP5 pH 6.0
Descriptor: 1,2-ETHANEDIOL, Outer capsid protein VP5
Authors:Stuart, D.I, Sutton, G.C.
Deposit date:2024-01-25
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The effect of pH on the structure of Bluetongue virus VP5.
J.Gen.Virol., 105, 2024
5GGS
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BU of 5ggs by Molmil
PD-1 in complex with pembrolizumab Fab
Descriptor: Programmed cell death protein 1, heavy chain, light chain
Authors:Heo, Y.S.
Deposit date:2016-06-16
Release date:2016-11-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structural basis of checkpoint blockade by monoclonal antibodies in cancer immunotherapy
Nat Commun, 7, 2016
6GU8
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BU of 6gu8 by Molmil
Glucuronoyl Esterase from Solibacter usitatus
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Putative acetyl xylan esterase
Authors:Lo Leggio, L, Larsbrink, J, Meland Knudsen, R, Mazurkewich, S, Navarro Poulsen, J.C.
Deposit date:2018-06-19
Release date:2018-08-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01807833 Å)
Cite:Biochemical and structural features of diverse bacterial glucuronoyl esterases facilitating recalcitrant biomass conversion.
Biotechnol Biofuels, 11, 2018
8AND
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BU of 8and by Molmil
Domain swapped dimer of smolstatin (stefin) from Sphaerospora molnari
Descriptor: 1,2-ETHANEDIOL, Smolstatin
Authors:Havlickova, P, Bartosova-Sojkova, P, Sojka, D, Kascakova, B, Gavira, J.A, Kuta Smatanova, I.
Deposit date:2022-08-05
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Domain swapped dimer of smolstatin (stefin) from Sphaerospora molnari
To Be Published
5GID
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BU of 5gid by Molmil
Crystal structure of VDR in complex with DLAM-4 (C2 form)
Descriptor: (3R,5S)-5-[(2R)-2-[(1R,3aS,4E,7aR)-7a-methyl-4-[(2Z)-2-[(3S,5R)-2-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]propyl]-3-methyl-3-oxidanyl-1-(4-phenylbutyl)pyrrolidin-2-one, SRC1, Vitamin D3 receptor
Authors:Asano, L, Shimizu, T.
Deposit date:2016-06-23
Release date:2016-12-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Regulation of the vitamin D receptor by vitamin D lactam derivatives.
Febs Lett., 590, 2016

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