Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7JR9
DownloadVisualize
BU of 7jr9 by Molmil
Chlamydomonas reinhardtii radial spoke minimal head complex
Descriptor: Flagellar radial spoke protein 10, Flagellar radial spoke protein 4, Flagellar radial spoke protein 6, ...
Authors:Grossman-Haham, I, Coudray, N, Yu, Z, Wang, F, Bhabha, G, Vale, R.D.
Deposit date:2020-08-11
Release date:2020-12-16
Last modified:2021-01-27
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure of the radial spoke head and insights into its role in mechanoregulation of ciliary beating.
Nat.Struct.Mol.Biol., 28, 2021
5T16
DownloadVisualize
BU of 5t16 by Molmil
Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog
Descriptor: 1,2-ETHANEDIOL, RNA substrate analog, Ribonuclease 3
Authors:Song, H, Ji, X.
Deposit date:2016-08-18
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III.
Structure, 25, 2017
1GQE
DownloadVisualize
BU of 1gqe by Molmil
Polypeptide Chain Release Factor 2 (RF2) from Escherichia coli
Descriptor: RELEASE FACTOR 2
Authors:Vestergaard, B, Kjeldgaard, M.
Deposit date:2001-11-22
Release date:2002-04-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Bacterial Polypeptide Release Factor Rf2 is Structurally Distinct from Eukaryotic Erf1.
Mol.Cell, 8, 2001
7USF
DownloadVisualize
BU of 7usf by Molmil
Mouse mammary tumor virus strand transfer complex intasome
Descriptor: CALCIUM ION, Integrase, ZINC ION, ...
Authors:Jozwik, I, Lyumkis, D.
Deposit date:2022-04-25
Release date:2022-08-24
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:B-to-A transition in target DNA during retroviral integration.
Nucleic Acids Res., 50, 2022
8SP3
DownloadVisualize
BU of 8sp3 by Molmil
Asymmetric dimer of MapSPARTA bound with gRNA/tDNA hybrid
Descriptor: MAGNESIUM ION, TIR-APAZ, guide RNA, ...
Authors:Shen, Z.F, Yang, X.Y, Fu, T.M.
Deposit date:2023-05-01
Release date:2023-08-23
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Oligomerization-mediated activation of a short prokaryotic Argonaute.
Nature, 621, 2023
6J8I
DownloadVisualize
BU of 6j8i by Molmil
Structure of human voltage-gated sodium channel Nav1.7 in complex with auxiliary beta subunits, ProTx-II and tetrodotoxin (Y1755 up)
Descriptor: (1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name), 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shen, H, Liu, D, Lei, J, Yan, N.
Deposit date:2019-01-19
Release date:2019-02-27
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of human Nav1.7 channel in complex with auxiliary subunits and animal toxins.
Science, 363, 2019
6HJD
DownloadVisualize
BU of 6hjd by Molmil
Cholera toxin classical B-pentamer in complex with Lewis-x
Descriptor: BICINE, CALCIUM ION, Cholera toxin B subunit, ...
Authors:Krengel, U, Heim, J.B.
Deposit date:2018-09-03
Release date:2019-08-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structures of cholera toxin in complex with fucosylated receptors point to importance of secondary binding site.
Sci Rep, 9, 2019
1NSG
DownloadVisualize
BU of 1nsg by Molmil
THE STRUCTURE OF THE IMMUNOPHILIN-IMMUNOSUPPRESSANT FKBP12-RAPAMYCIN COMPLEX INTERACTING WITH HUMAN FRAP
Descriptor: C49-METHYL RAPAMYCIN, FK506-BINDING PROTEIN, FKBP-RAPAMYCIN ASSOCIATED PROTEIN (FRAP)
Authors:Liang, J, Choi, J, Clardy, J.
Deposit date:1997-07-01
Release date:1998-03-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined structure of the FKBP12-rapamycin-FRB ternary complex at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
4HH2
DownloadVisualize
BU of 4hh2 by Molmil
Structure of PpsR without the HTH motif from Rb. sphaeroides
Descriptor: Transcriptional regulator, PpsR
Authors:Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
Deposit date:2012-10-09
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
4HH0
DownloadVisualize
BU of 4hh0 by Molmil
Dark-state structure of AppA C20S without the Cys-rich region from Rb. sphaeroides
Descriptor: AppA protein, CHLORIDE ION, FLAVIN MONONUCLEOTIDE
Authors:Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
Deposit date:2012-10-09
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
8UKE
DownloadVisualize
BU of 8uke by Molmil
Crystal Structure of Norbelladine O-methyltransferase variant in complex with SAH
Descriptor: CALCIUM ION, Norbelladine 4'-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Kim, W, Zhang, Y.J.
Deposit date:2023-10-12
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme.
Nat Commun, 15, 2024
5X4J
DownloadVisualize
BU of 5x4j by Molmil
The crystal structure of Pyrococcus furiosus RecJ (Zn-soaking)
Descriptor: CHLORIDE ION, Uncharacterized protein, ZINC ION
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
5X4K
DownloadVisualize
BU of 5x4k by Molmil
The complex crystal structure of Pyrococcus furiosus RecJ and CMP
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Uncharacterized protein, ZINC ION
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
5NFA
DownloadVisualize
BU of 5nfa by Molmil
Structure of Galectin-3 CRD in complex with compound 3
Descriptor: 3-O-[(3-methoxyphenyl)methyl]-beta-D-galactopyranose-(1-4)-N-acetyl-2-(acetylamino)-2-deoxy-beta-D-glucopyranosylamine, Galectin-3
Authors:Ronin, C, Atmanene, C, Gautier, F.M, Djedaini Pilard, F, Teletchea, S, Ciesielski, F, Vivat Hannah, V, Grandjean, C.
Deposit date:2017-03-13
Release date:2017-06-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Biophysical and structural characterization of mono/di-arylated lactosamine derivatives interaction with human galectin-3.
Biochem. Biophys. Res. Commun., 489, 2017
6HMY
DownloadVisualize
BU of 6hmy by Molmil
Cholera toxin classical B-pentamer in complex with fucosyl-GM1
Descriptor: BICINE, CALCIUM ION, Cholera enterotoxin B-subunit, ...
Authors:Krengel, U, Heim, J.B.
Deposit date:2018-09-13
Release date:2019-08-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of cholera toxin in complex with fucosylated receptors point to importance of secondary binding site.
Sci Rep, 9, 2019
5VWU
DownloadVisualize
BU of 5vwu by Molmil
Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Tanner, J.J.
Deposit date:2017-05-22
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Identification of the NAD(P)H binding site of eukaryotic UDP-galactopyranose mutase.
J. Am. Chem. Soc., 134, 2012
6DH5
DownloadVisualize
BU of 6dh5 by Molmil
Crystal structure of HIV-1 Protease NL4-3 V82I Mutant in complex with UMass6
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-3-{[(4-aminophenyl)sulfonyl](2-ethylbutyl)amino}-1-benzyl-2-hydroxypropyl]carbamate, Protease, SULFATE ION
Authors:Lockbaum, G.J, Schiffer, C.A.
Deposit date:2018-05-18
Release date:2018-12-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.008 Å)
Cite:Structural Adaptation of Darunavir Analogues against Primary Mutations in HIV-1 Protease.
ACS Infect Dis, 5, 2019
7Z4C
DownloadVisualize
BU of 7z4c by Molmil
SpCas9 bound to 6 nucleotide complementary DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 6 nucleotide complementary DNA substrate, Target strand of 6 nucleotide complementary DNA substrate, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-03-03
Release date:2022-08-31
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4H
DownloadVisualize
BU of 7z4h by Molmil
SpCas9 bound to 14-nucleotide complementary DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 14-nucleotide complementary DNA substrate, Target strand of 14-nucleotide complementary DNA substrate, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-03-03
Release date:2022-08-31
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4G
DownloadVisualize
BU of 7z4g by Molmil
SpCas9 bound to 12-nucleotide complementary DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 12-nucleotide complementary DNA substrate, Target strand of 12-nucleotide complementary DNA substrate, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-03-03
Release date:2022-08-31
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4K
DownloadVisualize
BU of 7z4k by Molmil
SpCas9 bound to 10-nucleotide complementary DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 10-nucleotide complementary DNA substrate, Target strand of 10-nucleotide complementary DNA substrate, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-03-04
Release date:2022-08-31
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.81 Å)
Cite:R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
2WW4
DownloadVisualize
BU of 2ww4 by Molmil
a triclinic crystal form of E. coli 4-diphosphocytidyl-2C-methyl-D- erythritol kinase
Descriptor: 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL
Authors:Kalinowska-Tluscik, J, Miallau, L, Gabrielsen, M, Leonard, G.A, McSweeney, S.M, Hunter, W.N.
Deposit date:2009-10-21
Release date:2010-03-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Triclinic Crystal Form of Escherichia Coli 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Kinase and Reassessment of the Quaternary Structure.
Acta Crystallogr.,Sect.F, 66, 2010
5X4I
DownloadVisualize
BU of 5x4i by Molmil
Pyrococcus furiosus RecJ (D83A, Mn-soaking)
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Uncharacterized protein
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
4FVT
DownloadVisualize
BU of 4fvt by Molmil
Human SIRT3 bound to Ac-ACS peptide and Carba-NAD
Descriptor: Acetylated ACS2 peptide, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, GLYCEROL, ...
Authors:Dai, H.
Deposit date:2012-06-29
Release date:2012-08-15
Last modified:2012-09-19
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Synthesis of Carba-NAD and the Structures of Its Ternary Complexes with SIRT3 and SIRT5.
J.Org.Chem., 77, 2012
7OEO
DownloadVisualize
BU of 7oeo by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD4 N-(2,2-diphenylethyl)-4-methoxy-3,5-dimethyl-N-(2-(methylamino)-2-oxoethyl)benzamide
Descriptor: Bromodomain-containing protein 4, N-(2,2-diphenylethyl)-4-methoxy-3,5-dimethyl-N-[2-(methylamino)-2-oxidanylidene-ethyl]benzamide
Authors:Chung, C.
Deposit date:2021-05-03
Release date:2021-07-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Discovery of a Highly Selective BET BD2 Inhibitor from a DNA-Encoded Library Technology Screening Hit.
J.Med.Chem., 64, 2021

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon