Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1IGY
DownloadVisualize
BU of 1igy by Molmil
STRUCTURE OF IMMUNOGLOBULIN
Descriptor: IGG1 INTACT ANTIBODY MAB61.1.3, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Harris, L.J, McPherson, A.
Deposit date:1997-10-09
Release date:1998-04-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystallographic structure of an intact IgG1 monoclonal antibody.
J.Mol.Biol., 275, 1998
8I7R
DownloadVisualize
BU of 8i7r by Molmil
In situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat
Descriptor: Cilia and flagella-associated protein 77, Cilia- and flagella-associated protein 107, Cilia- and flagella-associated protein 141, ...
Authors:Zhu, Y, Yin, G.L, Tai, L.H, Sun, F.
Deposit date:2023-02-02
Release date:2023-10-11
Last modified:2023-12-06
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:In-cell structural insight into the stability of sperm microtubule doublet.
Cell Discov, 9, 2023
2GBH
DownloadVisualize
BU of 2gbh by Molmil
NMR structure of stem region of helix-35 of 23S E.coli ribosomal RNA (residues 736-760)
Descriptor: 5'-R(*(GMP)P*GP*GP*CP*UP*AP*AP*UP*GP*(PSU)P*UP*GP*AP*AP*AP*AP*AP*UP*UP*AP*GP*CP*CP*C)-3'
Authors:Bax, A, Boisbouvier, J, Bryce, D, Grishaev, A, Jaroniec, C, Miclet, E, Nikonovicz, E, O'Neil-Cabello, E, Ying, J.
Deposit date:2006-03-10
Release date:2006-04-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Measurement of five dipolar couplings from a single 3D NMR multiplet applied to the study of RNA dynamics.
J.Am.Chem.Soc., 126, 2004
225D
DownloadVisualize
BU of 225d by Molmil
A TETRAMERIC DNA STRUCTURE WITH PROTONATED CYTOSINE:CYTOSINE BASE PAIRS
Descriptor: DNA (5'-D(*TP*CP*CP*CP*CP*C)-3')
Authors:Gehring, K, Leroy, J.L, Gueron, M.
Deposit date:1995-07-12
Release date:1995-10-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A tetrameric DNA structure with protonated cytosine.cytosine base pairs.
Nature, 363, 1993
7EZX
DownloadVisualize
BU of 7ezx by Molmil
Structure of the phycobilisome from the red alga Porphyridium purpureum in Middle Light
Descriptor: Allophycocyanin alpha subunit, Allophycocyanin beta 18 subunit, Allophycocyanin beta subunit, ...
Authors:Ma, J.F, Sui, S.-F.
Deposit date:2021-06-02
Release date:2022-09-28
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The structural basis for light acclimation in phycobilisome light harvesting systems systems in Porphyridium purpureum
Commun Biol, 6, 2023
5W6C
DownloadVisualize
BU of 5w6c by Molmil
UCA Fab (unbound) from 6649 Lineage
Descriptor: UCA Fab heavy chain, UCA Fab light chain
Authors:Raymond, D.D, Harrison, S.C.
Deposit date:2017-06-16
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.634 Å)
Cite:Conserved epitope on influenza-virus hemagglutinin head defined by a vaccine-induced antibody.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7W66
DownloadVisualize
BU of 7w66 by Molmil
Crystal structure of a PSH1 mutant in complex with ligand
Descriptor: PSH1, bis(2-hydroxyethyl) benzene-1,4-dicarboxylate
Authors:Gao, J, Lara, P, Li, Z.S, Han, X, Wei, R, Liu, W.D.
Deposit date:2021-12-01
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
7W6C
DownloadVisualize
BU of 7w6c by Molmil
Crystal structure of a PSH1 in complex with ligand J1K
Descriptor: 4-(2-hydroxyethylcarbamoyl)benzoic acid, PSH1
Authors:Gao, J, Lara, P, Li, Z.S, Han, X, Wei, R, Liu, W.D.
Deposit date:2021-12-01
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
7W69
DownloadVisualize
BU of 7w69 by Molmil
Crystal structure of a PSH1 mutant in complex with EDO
Descriptor: 1,2-ETHANEDIOL, PSH1
Authors:Gao, J, Lara, P, Li, Z.S, Han, X, Wei, R, Liu, W.D.
Deposit date:2021-12-01
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
7W6O
DownloadVisualize
BU of 7w6o by Molmil
Crystal structure of a PSH1 in complex with J1K
Descriptor: 4-(2-hydroxyethylcarbamoyl)benzoic acid, PSH1
Authors:Gao, J, Lara, P, Li, Z.S, Han, X, Wei, R, Liu, W.D.
Deposit date:2021-12-02
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
7W6Q
DownloadVisualize
BU of 7w6q by Molmil
Crystal structure of a PSH1 in complex with ligand J1K
Descriptor: 4-(2-hydroxyethylcarbamoyl)benzoic acid, PSH1
Authors:Gao, J, Lara, P, Li, Z.S, Han, X, Wei, R, Liu, W.D.
Deposit date:2021-12-02
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
5C7K
DownloadVisualize
BU of 5c7k by Molmil
Crystal structure BG505 SOSIP gp140 HIV-1 Env trimer bound to broadly neutralizing antibodies PGT128 and 8ANC195
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab 8ANC195 heavy chain, ...
Authors:Kong, L, Stanfield, R.L, Wilson, I.A.
Deposit date:2015-06-24
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.6019 Å)
Cite:Complete epitopes for vaccine design derived from a crystal structure of the broadly neutralizing antibodies PGT128 and 8ANC195 in complex with an HIV-1 Env trimer.
Acta Crystallogr.,Sect.D, 71, 2015
5FYJ
DownloadVisualize
BU of 5fyj by Molmil
Crystal Structure at 3.4 A Resolution of Fully Glycosylated HIV-1 Clade G X1193.c1 SOSIP.664 Prefusion Env Trimer in Complex with Broadly Neutralizing Antibodies PGT122, 35O22 and VRC01
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Stewart-Jones, G.B.E, Zhou, T, Thomas, P.V, Kwong, P.D.
Deposit date:2016-03-08
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Trimeric HIV-1-Env Structures Define Glycan Shields from Clades A, B and G
Cell(Cambridge,Mass.), 165, 2016
6Q3G
DownloadVisualize
BU of 6q3g by Molmil
Structure of native bacteriophage P68
Descriptor: Arstotzka protein, Head fiber protein, Inner core protein, ...
Authors:Dominik, H, Karel, S, Fuzik, T, Plevka, P.
Deposit date:2018-12-04
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6Q10
DownloadVisualize
BU of 6q10 by Molmil
Crystal structure of the soluble domain (residues 71-217) of a conserved hypothetical secreted protein (Rv2700 ortholog) from Mycobacterium marinum
Descriptor: 1,2-ETHANEDIOL, MymaA.19257.a.B3
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-02
Release date:2019-08-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:SSGCID, Mycobacerium marinum, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, secreted protein, Rv2700 ortholog
to be published
1M25
DownloadVisualize
BU of 1m25 by Molmil
STRUCTURE OF SYNTHETIC 26-MER PEPTIDE CONTAINING 145-169 SHEEP PRION PROTEIN SEGMENT AND C-TERMINAL CYSTEINE IN TFE SOLUTION
Descriptor: MAJOR PRION PROTEIN
Authors:Megy, S, Bertho, G, Kozin, S.A, Coadou, G, Debey, P, Hoa, G.H, Girault, J.-P.
Deposit date:2002-06-21
Release date:2002-07-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Possible role of region 152-156 in the structural duality of a peptide fragment from sheep prion protein
Protein Sci., 13, 2004
4UOJ
DownloadVisualize
BU of 4uoj by Molmil
Structure of Fungal beta-mannosidase (GH2) from Trichoderma harzianum
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(3-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Muniz, J.R.C, Aparicio, R, Santos, J.C, Nascimento, A.S, Golubev, A.M, Polikarpov, I.
Deposit date:2014-06-04
Release date:2014-07-09
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights Into the Structure and Function of Fungal Beta-Mannosidases from Glycoside Hydrolase Family 2 Based on Multiple Crystal Structures of the Trichoderma Harzianum Enzyme.
FEBS J., 281, 2014
7CUV
DownloadVisualize
BU of 7cuv by Molmil
Crystal structure of a novel alpha/beta hydrolase in apo form
Descriptor: alpha/beta hydrolase
Authors:Gao, J, Han, X, Zheng, Y.Y, Liu, W.D.
Deposit date:2020-08-25
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
7E30
DownloadVisualize
BU of 7e30 by Molmil
Crystal structure of a novel alpha/beta hydrolase in apo form in complex with citrate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, SULFATE ION, ...
Authors:Gao, J, Han, X, Zheng, Y.Y, Liu, W.D.
Deposit date:2021-02-07
Release date:2022-02-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
7E31
DownloadVisualize
BU of 7e31 by Molmil
Crystal structure of a novel alpha/beta hydrolase mutant in apo form
Descriptor: TRIETHYLENE GLYCOL, alpha/beta hydrolase
Authors:Gao, J, Han, X, Zheng, Y.Y, Liu, W.D.
Deposit date:2021-02-07
Release date:2022-02-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
8FR7
DownloadVisualize
BU of 8fr7 by Molmil
A hinge glycan regulates spike bending and impacts coronavirus infectivity
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pintilie, G, Wilson, E, Chmielewski, D, Schmid, M.F, Jin, J, Chen, M, Singharoy, A, Chiu, W.
Deposit date:2023-01-06
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:A hinge glycan regulates spike bending and impacts coronavirus infectivity
To Be Published
5T3Z
DownloadVisualize
BU of 5t3z by Molmil
3.5 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074
Descriptor: 10-1074 Heavy Chain, 10-1074 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gristick, H.B, Bjorkman, P.J.
Deposit date:2016-08-26
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Natively glycosylated HIV-1 Env structure reveals new mode for antibody recognition of the CD4-binding site.
Nat.Struct.Mol.Biol., 23, 2016
6WLA
DownloadVisualize
BU of 6wla by Molmil
Antigen binding fragment of ch128.1
Descriptor: Fab ch128.1 heavy chain, Fab ch128.1 light chain, GLYCEROL
Authors:Helguera, G, Rodriguez, J.A, Sawaya, M, Cascio, D, Zink, S, Ziegenbein, J, Short, C.
Deposit date:2020-04-18
Release date:2021-03-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Host receptor-targeted therapeutic approach to counter pathogenic New World mammarenavirus infections.
Nat Commun, 13, 2022
5YC5
DownloadVisualize
BU of 5yc5 by Molmil
Crystal structure of human IgG-Fc in complex with aglycan and optimized Fc gamma receptor IIIa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Immunoglobulin gamma-1 heavy chain, ...
Authors:Caaveiro, J.M.M, Tamura, H, Tsumoto, K, Kiyoshi, M.
Deposit date:2017-09-06
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Assessing the Heterogeneity of the Fc-Glycan of a Therapeutic Antibody Using an engineered Fc gamma Receptor IIIa-Immobilized Column.
Sci Rep, 8, 2018
6BF4
DownloadVisualize
BU of 6bf4 by Molmil
Crystal Structure of HIV-1 Clade AE Strain CNE55 gp120 Core in Complex with Neutralizing Antibody VRC-PG05 that Targets the Center of the Silent Face on the Outer Domain of gp120
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhou, T, Kwong, P.D.
Deposit date:2017-10-25
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:A Neutralizing Antibody Recognizing Primarily N-Linked Glycan Targets the Silent Face of the HIV Envelope.
Immunity, 48, 2018

221371

건을2024-06-19부터공개중

PDB statisticsPDBj update infoContact PDBjnumon