PDB: 5653 resultsInfo pagesStatus searchChemie searchBIRD

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6SRZ	Kemp Eliminase HG3.17 mutant Q50H, E47N, N300D Complexed with Transition State Analog 6-Nitrobenzotriazole Descriptor: 6-NITROBENZOTRIAZOLE, GLYCEROL, Kemp Eliminase HG3.17 Q50H, ... Authors: Bloch, J.S, Pinkas, D.M, Hilvert, D. Deposit date: 2019-09-06 Release date: 2020-04-01 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Contribution of Oxyanion Stabilization to Kemp Eliminase Efficiencyproficiency Acs Catalysis, 2020
1N0A	Turn stability in beta-hairpin peptides: 3:5 type I G1 bulge turns Descriptor: bhpw_pdg, beta-hairpin peptide Authors: Blandl, T, Cochran, A.G, Skelton, N.J. Deposit date: 2002-10-11 Release date: 2003-10-21 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: Turn stability in beta-hairpin peptides: Investigation of peptides containing 3:5 type I G1 bulge turns PROTEIN SCI., 12, 2003
4O60	Structure of ankyrin repeat protein Descriptor: ANK-N5C-317 Authors: Ethayathulla, A.S, Guan, L. Deposit date: 2013-12-20 Release date: 2015-03-25 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.52 Å) Cite: A transcription blocker isolated from a designed repeat protein combinatorial library by in vivo functional screen. Sci Rep, 5, 2015
4O5S	Crystal structure of Diels-Alderase CE11 Descriptor: Diisopropyl-fluorophosphatase Authors: Beck, T, Preiswerk, N, Mayer, C, Hilvert, D. Deposit date: 2013-12-20 Release date: 2014-06-04 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase. Proc.Natl.Acad.Sci.USA, 111, 2014
4LPU	Crystal structure of TENCON variant P40AR2-32R2 Descriptor: TENCON variant P40AR2-32R2 Authors: Teplyakov, A, Obmolova, G, Gilliland, G.L. Deposit date: 2013-07-16 Release date: 2014-01-29 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.4 Å) Cite: C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014
4LPY	Crystal structure of TENCON variant G10 Descriptor: SODIUM ION, TENCON variant G10 Authors: Teplyakov, A, Obmolova, G, Gilliland, G.L. Deposit date: 2013-07-16 Release date: 2014-01-29 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.92 Å) Cite: C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014
5TWI	Alpha Helix Nucleation by a Simple Cyclic Tetrapeptide Descriptor: Cyclic tetrapeptide ALA-ARG-ALA-UN1 Authors: Hoang, H.N, Fairlie, D.P. Deposit date: 2016-11-13 Release date: 2016-12-14 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Alpha Helix Nucleation by a Simple Cyclic Tetrapeptide To Be Published
5U5B	Coiled Coil Peptide Metal Coordination Framework: Trimer Fold Descriptor: COPPER (II) ION, Designed trimeric coiled coil peptide with two terpyridine side chains, GLYCEROL Authors: Tavenor, N.A, Murnin, M.J, Horne, W.S. Deposit date: 2016-12-06 Release date: 2017-02-22 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Supramolecular Metal-Coordination Polymers, Nets, and Frameworks from Synthetic Coiled-Coil Peptides. J. Am. Chem. Soc., 139, 2017
4LPV	Crystal structure of TENCON variant P41BR3-42 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TENCON variant P41BR3-42 Authors: Teplyakov, A, Obmolova, G, Luo, J, Gilliland, G.L. Deposit date: 2013-07-16 Release date: 2014-01-29 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014
5US3	Heterogeneous-backbone Foldamer Mimic of the Sp1-3 Zinc Finger Descriptor: Heterogeneous-Backbone Variant of the Sp1-3 Zinc Finger: N-Me-Ala3, N-Me-Arg10, beta-3-Asp15, ... Authors: George, K.L, Horne, W.S. Deposit date: 2017-02-13 Release date: 2017-05-31 Last modified: 2024-07-10 Method: SOLUTION NMR Cite: Heterogeneous-Backbone Foldamer Mimics of Zinc Finger Tertiary Structure. J. Am. Chem. Soc., 139, 2017
5VAV	Design of a novel cyclic peptide that alleviates symptoms in a murine model of inflammatory bowel disease Descriptor: cyc-MC12 Authors: Daly, N.L, Cobos Caceres, C. Deposit date: 2017-03-28 Release date: 2017-05-10 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: An engineered cyclic peptide alleviates symptoms of inflammation in a murine model of inflammatory bowel disease. J. Biol. Chem., 292, 2017
4OXW	X-ray structure of a designed CISK-PX domain Descriptor: SULFATE ION, designed CISK-PX domain Authors: Zhang, Y, Shultis, D.D, Dodge, G. Deposit date: 2014-02-07 Release date: 2015-01-21 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.73 Å) Cite: X-ray structure of a designed CISK-PX domain To Be Published
6U47	Coiled-coil Trimer with Glu:Ala:Lys Triad Descriptor: peptide with Glu:Ala:Lys triad Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-08-23 Release date: 2020-04-29 Last modified: 2020-05-20 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
4OYD	Crystal structure of a computationally designed inhibitor of an Epstein-Barr viral Bcl-2 protein Descriptor: 1,2-ETHANEDIOL, Apoptosis regulator BHRF1, Computationally designed Inhibitor Authors: Shen, B, Procko, E, Baker, D, Stoddard, B. Deposit date: 2014-02-11 Release date: 2014-07-09 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A computationally designed inhibitor of an epstein-barr viral bcl-2 protein induces apoptosis in infected cells. Cell, 157, 2014
5V65	Crystal structure of macrocycles containing Abeta 17-23 (LV(PHI)FAED) and Abeta 30-36 (AII(SAR)L(ORN)V) Descriptor: ORN-LEU-VAL-PHI-PHE-ALA-GLU-ASP-ORN-ALA-ILE-ILE-SAR-LEU-MET-VAL Authors: Kreutzer, A.G, Salveson, P.J, Nowick, J.S. Deposit date: 2017-03-15 Release date: 2017-06-28 Last modified: 2020-01-01 Method: X-RAY DIFFRACTION (2.52 Å) Cite: X-ray Crystallographic Structure of a Compact Dodecamer from a Peptide Derived from A beta 16-36. Org. Lett., 19, 2017
5VNW	Crystal structure of Nb.b201 bound to human serum albumin Descriptor: GLYCEROL, LAURIC ACID, Nb.b201, ... Authors: McMahon, C, Kruse, A.C. Deposit date: 2017-05-01 Release date: 2018-02-21 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Yeast surface display platform for rapid discovery of conformationally selective nanobodies. Nat. Struct. Mol. Biol., 25, 2018
3CAY	Crystal structure of Lipopeptide Detergent (LPD-12) Descriptor: DODECYL-BETA-D-MALTOSIDE, LPD-12 Authors: Ho, D.N, Pomroy, N.C, Cuesta-Seijo, J.A, Prive, G.G. Deposit date: 2008-02-20 Release date: 2008-09-09 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Crystal structure of a self-assembling lipopeptide detergent at 1.20 A. Proc.Natl.Acad.Sci.USA, 105, 2008
4OZC	Backbone Modifications in the Protein GB1 Helix and Loops: beta-ACPC21, beta-ACPC24, beta-3-Lys28, beta-3-Lys31, beta-ACPC35, beta-ACPC40 Descriptor: GLYCEROL, SULFATE ION, Streptococcal Protein GB1 Backbone Modified Variant: beta-ACPC21, ... Authors: Reinert, Z.E, Horne, W.S. Deposit date: 2014-02-14 Release date: 2014-07-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Folding Thermodynamics of Protein-Like Oligomers with Heterogeneous Backbones. Chem Sci, 5, 2014
3CBA	Crystal structure of Lipopeptide Detergent (LPD-12) (Hexagonal) Descriptor: DECYL-BETA-D-MALTOPYRANOSIDE, LPD-12 Authors: Ho, D.N, Pomroy, N.C, Cuesta-Seijo, J.A, Prive, G.G. Deposit date: 2008-02-21 Release date: 2008-09-09 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Packing and Twinning in Orthorhombic and Hexagonal Crystals of Lipopeptide Detergent (LPD-12) To be Published
6A9W	Structure of the bifunctional DNA primase-polymerase from phage NrS-1 Descriptor: Primase Authors: Guo, H.J, Li, M.J, Wang, T.L, Wu, H, Zhou, H, Xu, C.Y, Liu, X.P, Yu, F, He, J.H. Deposit date: 2018-07-16 Release date: 2019-03-13 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure and biochemical studies of the bifunctional DNA primase-polymerase from phage NrS-1. Biochem. Biophys. Res. Commun., 510, 2019
4IWW	Computational Design of an Unnatural Amino Acid Metalloprotein with Atomic Level Accuracy Descriptor: COBALT (II) ION, SULFATE ION, Unnatural Amino Acid Mediated Metalloprotein Authors: Mills, J, Bolduc, J, Khare, S, Stoddard, B, Baker, D. Deposit date: 2013-01-24 Release date: 2013-08-21 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Computational design of an unnatural amino Acid dependent metalloprotein with atomic level accuracy. J.Am.Chem.Soc., 135, 2013
4OZA	Backbone Modifications in the Protein GB1 Helix: beta-3-Ala24, beta-3-Lys28, beta-3-Gln32, beta-3-Asp36 Descriptor: ISOPROPYL ALCOHOL, Streptococcal Protein GB1 Backbone Modified Variant: beta-3-Ala24, beta-3-Lys28, ... Authors: Reinert, Z.E, Horne, W.S. Deposit date: 2014-02-14 Release date: 2014-07-16 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.201 Å) Cite: Folding Thermodynamics of Protein-Like Oligomers with Heterogeneous Backbones. Chem Sci, 5, 2014
5VNV	Crystal structure of Nb.b201 Descriptor: FORMIC ACID, Nb.b201, PENTAETHYLENE GLYCOL, ... Authors: Kruse, A.C, McMahon, C. Deposit date: 2017-05-01 Release date: 2018-02-21 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Yeast surface display platform for rapid discovery of conformationally selective nanobodies. Nat. Struct. Mol. Biol., 25, 2018
4NW9	Crystal structure of macrocycles containing Abeta17-23 (LVF(MEA)AED) and Abeta30-36 (AIIGL(ORN)V) Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LVF(MEA)AED(ORN)AIIGL(ORN)V, SODIUM ION Authors: Spencer, R.K, Li, H, Nowick, J.S. Deposit date: 2013-12-05 Release date: 2014-04-02 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.66 Å) Cite: X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36). J.Am.Chem.Soc., 136, 2014
4P4X	Dodecamer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVA(MLE)AVK Descriptor: CHLORIDE ION, CYCLIC HEXADECAPEPTIDE (ORN)YLL(PH7)YTE(ORN)KVA(MLE)AVK, SULFATE ION Authors: Spencer, R.K, Nowick, J.S. Deposit date: 2014-03-13 Release date: 2015-05-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.898 Å) Cite: X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc., 137, 2015

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