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8TJY
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BU of 8tjy by Molmil
Structure of Gabija AB complex
Descriptor: Endonuclease GajA, Gabija protein GajB
Authors:Shen, Z.F, Yang, X.Y, Fu, T.M.
Deposit date:2023-07-24
Release date:2024-04-24
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Molecular basis of Gabija anti-phage supramolecular assemblies.
Nat.Struct.Mol.Biol., 31, 2024
4ZTP
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BU of 4ztp by Molmil
Fab structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region
Descriptor: Heavy chain of Fab fragment of rabbit monoclonal antibody R53, Light chain of Fab fragment of rabbit monoclonal antibody R53
Authors:Pan, R, Kong, X.-P.
Deposit date:2015-05-14
Release date:2015-08-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural analysis of a novel rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region critical for receptor and co-receptor binding.
Emerg Microbes Infect, 4, 2015
2Y9W
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BU of 2y9w by Molmil
Crystal structure of PPO3, a tyrosinase from Agaricus bisporus, in deoxy-form that contains additional unknown lectin-like subunit
Descriptor: COPPER (II) ION, DI(HYDROXYETHYL)ETHER, HOLMIUM ATOM, ...
Authors:Ismaya, W.T, Rozeboom, H.J, Weijn, A, Mes, J.J, Fusetti, F, Wichers, H.J, Dijkstra, B.W.
Deposit date:2011-02-17
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Agaricus Bisporus Mushroom Tyrosinase: Identity of the Tetramer Subunits and Interaction with Tropolone.
Biochemistry, 50, 2011
4GW1
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BU of 4gw1 by Molmil
cQFD Meditope
Descriptor: Fab heavy chain, Fab light chain, PHOSPHATE ION, ...
Authors:Donaldson, J.M, Zer, C, Avery, K.N, Bzymek, K.P, Horne, D.A, Williams, J.C.
Deposit date:2012-08-31
Release date:2013-10-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Identification and grafting of a unique peptide-binding site in the Fab framework of monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 110, 2013
4ZTX
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BU of 4ztx by Molmil
Neurospora crassa cobalamin-independent methionine synthase complexed with Zn2+
Descriptor: Cobalamin-Independent Methionine synthase, GLYCEROL, NITRATE ION, ...
Authors:Wheatley, R.W, Ng, K.K, Kapoor, M.
Deposit date:2015-05-15
Release date:2015-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fungal cobalamin-independent methionine synthase: Insights from the model organism, Neurospora crassa.
Arch.Biochem.Biophys., 590, 2015
8TUX
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BU of 8tux by Molmil
Capsid of mature PP7 virion with 3'end region of PP7 genomic RNA
Descriptor: 3'end of PP7 genomic RNA, Capsid protein, Maturation protein A
Authors:Thongchol, J, Zhang, J, Zeng, L.
Deposit date:2023-08-17
Release date:2024-03-13
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Removal of Pseudomonas type IV pili by a small RNA virus.
Science, 384, 2024
4H3E
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BU of 4h3e by Molmil
Crystal structure of a putative iron superoxide dismutase from Trypanosoma cruzi bound to iron
Descriptor: FE (II) ION, Superoxide dismutase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-09-13
Release date:2012-09-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Iron superoxide dismutases in eukaryotic pathogens: new insights from Apicomplexa and Trypanosoma structures.
Acta Crystallogr F Struct Biol Commun, 71, 2015
4ZYB
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BU of 4zyb by Molmil
High resolution structure of M23 peptidase LytM with substrate analogue
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Grabowska, M, Jagielska, E, Czapinska, H, Bochtler, M, Sabala, I.
Deposit date:2015-05-21
Release date:2015-10-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High resolution structure of an M23 peptidase with a substrate analogue.
Sci Rep, 5, 2015
2YMA
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BU of 2yma by Molmil
X-ray structure of the Yos9 dimerization domain
Descriptor: PROTEIN OS-9 HOMOLOG
Authors:Hanna, J, Schuetz, A, Zimmermann, F, Behlke, J, Sommer, T, Heinemann, U.
Deposit date:2011-06-07
Release date:2012-01-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.545 Å)
Cite:Structural and Biochemical Basis of Yos9 Protein Dimerization and Possible Contribution to Self-Association of 3-Hydroxy-3-Methylglutaryl-Coenzyme a Reductase Degradation Ubiquitin-Ligase Complex.
J.Biol.Chem., 287, 2012
8TFF
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BU of 8tff by Molmil
PorX with BeF3 phosphate analog
Descriptor: ACETATE ION, BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, ...
Authors:Saran, A, Zeytuni, N.
Deposit date:2023-07-11
Release date:2024-04-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Unveiling the molecular mechanisms of the type IX secretion system's response regulator: Structural and functional insights.
Pnas Nexus, 3, 2024
4P72
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BU of 4p72 by Molmil
PheRS in complex with compound 2a
Descriptor: 2-{3-[(4-chloropyridin-2-yl)amino]phenoxy}-N-methylacetamide, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Ferguson, A.D.
Deposit date:2014-03-25
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability.
J.Biol.Chem., 289, 2014
2YE1
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BU of 2ye1 by Molmil
X-ray structure of the cyan fluorescent proteinmTurquoise-GL (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
Authors:von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-04-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Characterization of the Cyan Fluorescent Protein Mturquoise-Gl
To be Published
1M00
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BU of 1m00 by Molmil
Rat neuronal NOS heme domain with N-butyl-N'-hydroxyguanidine bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-BUTYL-N'-HYDROXYGUANIDINE, ...
Authors:Li, H, Shimizu, H, Flinspach, M, Jamal, J, Yang, W, Xian, M, Cai, T, Wen, E.Z, Jia, Q, Wang, P.G, Poulos, T.L.
Deposit date:2002-06-11
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Novel Binding Mode of N-Alkyl-N'-Hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO Biosynthesis
Biochemistry, 41, 2002
4ZZ8
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BU of 4zz8 by Molmil
X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: 1,2-ETHANEDIOL, 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, Glucanase/chitosanase, ...
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-22
Release date:2016-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4GX0
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BU of 4gx0 by Molmil
Crystal structure of the GsuK L97D mutant
Descriptor: CALCIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
Deposit date:2012-09-03
Release date:2012-12-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
4P7X
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BU of 4p7x by Molmil
L-pipecolic acid-bound L-proline cis-4-hydroxylase
Descriptor: (2S)-piperidine-2-carboxylic acid, 2-OXOGLUTARIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, ...
Authors:Shomura, Y, Koketsu, K, Moriwaki, K, Hayashi, M, Mitsuhashi, S, Hara, R, Kino, K, Higuchi, Y.
Deposit date:2014-03-28
Release date:2014-09-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Refined Regio- and Stereoselective Hydroxylation of l-Pipecolic Acid by Protein Engineering of l-Proline cis-4-Hydroxylase Based on the X-ray Crystal Structure.
Acs Synth Biol, 4, 2015
2YMV
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BU of 2ymv by Molmil
Structure of Reduced M Smegmatis 5246, a homologue of M.Tuberculosis Acg
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, ACETATE ION, ACG NITROREDUCTASE, ...
Authors:Chauviac, F.-X, Bommer, M, Dobbek, H, Keep, N.H.
Deposit date:2012-10-10
Release date:2012-11-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Reduced Msacg, a Putative Nitroreductase from Mycobacterium Smegmatis and a Close Homologue of Mycobacterium Tuberculosis Acg.
J.Biol.Chem., 287, 2012
4H53
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BU of 4h53 by Molmil
Influenza N2-Tyr406Asp neuraminidase in complex with beta-Neu5Ac
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Vavricka, C.J, Liu, Y, Kiyota, H, Sriwilaijaroen, N, Qi, J, Tanaka, K, Wu, Y, Li, Q, Li, Y, Yan, J, Suzuki, Y, Gao, G.F.
Deposit date:2012-09-18
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Influenza neuraminidase operates via a nucleophilic mechanism and can be targeted by covalent inhibitors
Nat Commun, 4, 2013
2YI1
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BU of 2yi1 by Molmil
Crystal structure of N-Acetylmannosamine kinase in complex with N- acetyl mannosamine 6-phosphate and ADP.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, 2-acetamido-2-deoxy-alpha-D-mannopyranose, ...
Authors:Martinez, J, Nguyen, L.D, Tauberger, E, Hinderlich, S, Reutter, W, Fan, H, Saenger, W, Moniot, S.
Deposit date:2011-05-10
Release date:2012-02-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures of N-Acetylmannosamine Kinase Provide Insights Into Enzyme Specificity and Inhibition
J.Biol.Chem., 287, 2012
4H84
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BU of 4h84 by Molmil
Crystal structure of the catalytic domain of Human MMP12 in complex with a selective carboxylate based inhibitor.
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Stura, E.A, Antoni, C, Vera, L, Cassar-Lajeunesse, E, Nuti, E, Dive, V, Rossello, A.
Deposit date:2012-09-21
Release date:2013-04-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.592 Å)
Cite:Crystallization of bi-functional ligand protein complexes.
J.Struct.Biol., 182, 2013
4N49
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BU of 4n49 by Molmil
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 Protein in complex with m7GpppG and SAM
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, S-ADENOSYLMETHIONINE, ...
Authors:Smietanski, M, Werener, M, Purta, E, Kaminska, K.H, Stepinski, J, Darzynkiewicz, E, Nowotny, M, Bujnicki, J.M.
Deposit date:2013-10-08
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of human 2'-O-ribose methyltransferases involved in mRNA cap structure formation.
Nat Commun, 5, 2014
4H9L
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BU of 4h9l by Molmil
Bacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides with ILE M265 replaced with SER
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
Authors:Mattis, A.J, Wraight, C.A.
Deposit date:2012-09-24
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Bacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides
To be Published
3VKI
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BU of 3vki by Molmil
Monoclinic Crystal Structure of Salmonella FlgA in closed form
Descriptor: Flagella basal body P-ring formation protein flgA
Authors:Matsunami, H, Samatey, F.A, Namba, K.
Deposit date:2011-11-16
Release date:2012-11-21
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural flexibility of the periplasmic protein, FlgA, regulates flagellar P-ring assembly in Salmonella enterica
Sci Rep, 6, 2016
4NAA
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BU of 4naa by Molmil
Crystal structure of UVB photoreceptor UVR8 from Arabidopsis thaliana and UV-induced structural changes at 120K
Descriptor: MAGNESIUM ION, Ultraviolet-B receptor UVR8
Authors:Yang, X, Zeng, X, Ren, Z, Zhao, K.H.
Deposit date:2013-10-22
Release date:2016-10-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Dynamic Crystallography Reveals Early Signalling Events in Ultraviolet Photoreceptor UVR8.
Nat Plants, 1, 2015
4H0M
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BU of 4h0m by Molmil
X-Ray Crystal Structure of Phycocyanin from Synechococcus elongatus sp. PCC 7942
Descriptor: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
Authors:Marx, A, Adir, N.
Deposit date:2012-09-09
Release date:2013-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Allophycocyanin and phycocyanin crystal structures reveal facets of phycobilisome assembly.
Biochim.Biophys.Acta, 1827, 2013

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