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2F5K
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Crystal structure of the chromo domain of human MRG15
Descriptor: Mortality factor 4-like protein 1
Authors:Zhang, P, Du, J, Ding, J.
Deposit date:2005-11-26
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human MRG15 chromo domain and its binding to Lys36-methylated histone H3.
Nucleic Acids Res., 34, 2006
2F5M
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Cross-linked barnase soaked in bromo-ethanol
Descriptor: 2-BROMOETHANOL, Ribonuclease
Authors:Prange, T, Salem, M.
Deposit date:2005-11-26
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F5N
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MutM crosslinked to undamaged DNA sampling A:T base pair IC1
Descriptor: 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*GP*GP*TP*CP*TP*AP*CP*C)-3', GLYCEROL, ...
Authors:Banerjee, A, Santos, W.L, Verdine, G.L.
Deposit date:2005-11-26
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a DNA glycosylase searching for lesions.
Science, 311, 2006
2F5O
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BU of 2f5o by Molmil
MutM crosslinked to undamaged DNA sampling G:C base pair IC3
Descriptor: 5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*GP*GP*AP*TP*CP*TP*AP*CP*C)-3', GLYCEROL, ...
Authors:Banerjee, A, Santos, W.L, Verdine, G.L.
Deposit date:2005-11-26
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of a DNA glycosylase searching for lesions.
Science, 311, 2006
2F5P
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BU of 2f5p by Molmil
MutM crosslinked to undamaged DNA sampling A:T base pair IC2
Descriptor: 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*G*TP*CP*CP*AP*AP*GP*TP*CP*TP*AP*CP*C)-3', ZINC ION, ...
Authors:Banerjee, A, Santos, W.L, Verdine, G.L.
Deposit date:2005-11-26
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a DNA glycosylase searching for lesions.
Science, 311, 2006
2F5Q
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Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC2
Descriptor: 5'-D(*AP*GP*G*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*G*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3', ZINC ION, ...
Authors:Banerjee, A, Santos, W.L, Verdine, G.L.
Deposit date:2005-11-26
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of a DNA glycosylase searching for lesions.
Science, 311, 2006
2F5S
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BU of 2f5s by Molmil
Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC1
Descriptor: 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*(8OG)P*AP*GP*TP*CP*TP*AP*CP*C)-3', ZINC ION, ...
Authors:Banerjee, A, Santos, W.L, Verdine, G.L.
Deposit date:2005-11-26
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of a DNA glycosylase searching for lesions.
Science, 311, 2006
2F5T
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BU of 2f5t by Molmil
Crystal Structure of the sugar binding domain of the archaeal transcriptional regulator TrmB
Descriptor: IMIDAZOLE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, archaeal transcriptional regulator TrmB
Authors:Krug, M, Lee, S.J, Diederichs, K, Boos, W, Welte, W.
Deposit date:2005-11-27
Release date:2006-02-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of the Sugar Binding Domain of the Archaeal Transcriptional Regulator TrmB
J.Biol.Chem., 281, 2006
2F5U
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BU of 2f5u by Molmil
Structural Characterization of the UL25 DNA Packaging Protein from Herpes Simplex Virus Type 1
Descriptor: Virion protein UL25
Authors:Bowman, B.R.
Deposit date:2005-11-27
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of the UL25 DNA-packaging protein from herpes simplex virus type 1
J.Virol., 80, 2006
2F5V
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BU of 2f5v by Molmil
Reaction geometry and thermostability mutant of pyranose 2-oxidase from the white-rot fungus Peniophora sp.
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, Pyranose 2-oxidase, ...
Authors:Bannwarth, M, Bastian, S, Heckmann-Pohl, D, Giffhorn, F, Schulz, G.E.
Deposit date:2005-11-28
Release date:2006-06-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Reaction Geometry and Thermostable Variant of Pyranose 2-Oxidase from the White-Rot Fungus Peniophora sp.
Biochemistry, 45, 2006
2F5W
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BU of 2f5w by Molmil
Cross-linked barnase soaked in 3 M thiourea
Descriptor: Ribonuclease, THIOUREA, ZINC ION
Authors:Prange, T, Salem, M.
Deposit date:2005-11-28
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F5X
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BU of 2f5x by Molmil
Structure of periplasmic binding protein BugD
Descriptor: ASPARTIC ACID, BugD
Authors:Huvent, I, Belrhali, H, Antoine, R, Bompard, C, Jacob-Dubuisson, F, Villeret, V.
Deposit date:2005-11-28
Release date:2006-01-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal Structure of Bordetella pertussis BugD Solute Receptor Unveils the Basis of Ligand Binding in a New Family of Periplasmic Binding Proteins
J.Mol.Biol., 356, 2006
2F5Y
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BU of 2f5y by Molmil
Crystal Structure of the PDZ Domain from Human RGS-3
Descriptor: SULFATE ION, regulator of G-protein signalling 3 isoform 1
Authors:Ugochukwu, E, Berridge, G, Johansson, C, Smee, C, Savitsky, P, Burgess, N, Colebrook, S, Yang, X, Elkins, J, Doyle, D, Turnbull, A, Papagrigoriou, E, Debreczeni, J, Bunkoczi, G, Gorrec, F, von Delft, F, Arrowsmith, C, Sundstrom, M, Weigelt, J, Edwards, A, Structural Genomics Consortium (SGC)
Deposit date:2005-11-28
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal Structure of the PDZ Domain from Human RGS-3
To be Published
2F5Z
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BU of 2f5z by Molmil
Crystal Structure of Human Dihydrolipoamide Dehydrogenase (E3) Complexed to the E3-Binding Domain of Human E3-Binding Protein
Descriptor: Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, Pyruvate dehydrogenase protein X component, ...
Authors:Brautigam, C.A, Chuang, J.L, Wynn, R.M, Tomchick, D.R, Machius, M, Chuang, D.T.
Deposit date:2005-11-28
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural Insight into Interactions between Dihydrolipoamide Dehydrogenase (E3) and E3 Binding Protein of Human Pyruvate Dehydrogenase Complex.
Structure, 14, 2006
2F60
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BU of 2f60 by Molmil
Crystal Structure of the Dihydrolipoamide Dehydrogenase (E3)-Binding Domain of Human E3-Binding Protein
Descriptor: GLYCEROL, Pyruvate dehydrogenase protein X component
Authors:Brautigam, C.A, Chuang, J.L, Wynn, R.M, Tomchick, D.R, Machius, M, Chuang, D.T.
Deposit date:2005-11-28
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Insight into Interactions between Dihydrolipoamide Dehydrogenase (E3) and E3 Binding Protein of Human Pyruvate Dehydrogenase Complex.
Structure, 14, 2006
2F61
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BU of 2f61 by Molmil
Crystal structure of partially deglycosylated acid beta-glucosidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acid beta-glucosidase, ...
Authors:Hegde, R.S, Grabowski, G.
Deposit date:2005-11-28
Release date:2005-12-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analyses of Variant Acid beta-Glucosidases: EFFECTS OF GAUCHER DISEASE MUTATIONS.
J.Biol.Chem., 281, 2006
2F62
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BU of 2f62 by Molmil
Crystal structure of Nucleoside 2-deoxyribosyltransferase from Trypanosoma brucei at 1.5 A resolution with (2-ETHYLPHENYL)METHANOL bound
Descriptor: (2-ETHYLPHENYL)METHANOL, GLYCEROL, Nucleoside 2-deoxyribosyltransferase, ...
Authors:Bosch, J, Robien, M.A, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-11-28
Release date:2005-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Using fragment cocktail crystallography to assist inhibitor design of Trypanosoma brucei nucleoside 2-deoxyribosyltransferase.
J.Med.Chem., 49, 2006
2F63
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BU of 2f63 by Molmil
Solution structure of HPPK in complex with inhibitor analogs AMPCPP and HP-1
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Authors:Yan, H, Li, G.
Deposit date:2005-11-28
Release date:2006-01-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of HPPK in complex with inhibitor analogs AMPCPP and HP-1
To be Published
2F64
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BU of 2f64 by Molmil
Crystal structure of Nucleoside 2-deoxyribosyltransferase from Trypanosoma brucei at 1.6 A resolution with 1-METHYLQUINOLIN-2(1H)-ONE bound
Descriptor: 1-METHYLQUINOLIN-2(1H)-ONE, GLYCEROL, Nucleoside 2-deoxyribosyltransferase, ...
Authors:Bosch, J, Robien, M.A, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-11-28
Release date:2005-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Using fragment cocktail crystallography to assist inhibitor design of Trypanosoma brucei nucleoside 2-deoxyribosyltransferase.
J.Med.Chem., 49, 2006
2F65
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BU of 2f65 by Molmil
Solution structure of HPPK in complex with inhibitor analog AMPCPP
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Authors:Yan, H, Li, G.
Deposit date:2005-11-28
Release date:2006-01-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of HPPK in complex with inhibitor analog AMPCPP
to be published
2F66
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BU of 2f66 by Molmil
Structure of the ESCRT-I endosomal trafficking complex
Descriptor: Protein SRN2, SULFATE ION, Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease, ...
Authors:Kostelansky, M.S, Lee, S, Kim, J, Hurley, J.H.
Deposit date:2005-11-28
Release date:2006-04-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional organization of the ESCRT-I trafficking complex.
Cell(Cambridge,Mass.), 125, 2006
2F67
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BU of 2f67 by Molmil
Crystal structure of Nucleoside 2-deoxyribosyltransferase from Trypanosoma brucei at 1.6 A resolution with BENZO[CD]INDOL-2(1H)-ONE bound
Descriptor: BENZO[CD]INDOL-2(1H)-ONE, GLYCEROL, Nucleoside 2-deoxyribosyltransferase, ...
Authors:Bosch, J, Robien, M.A, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-11-28
Release date:2005-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Using fragment cocktail crystallography to assist inhibitor design of Trypanosoma brucei nucleoside 2-deoxyribosyltransferase.
J.Med.Chem., 49, 2006
2F68
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BU of 2f68 by Molmil
Crystal structure of collagen adhesin (CNA) from S. aureus
Descriptor: Collagen adhesin
Authors:Zong, Y, Narayana, S.V.L.
Deposit date:2005-11-28
Release date:2006-12-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A 'Collagen Hug' model for Staphylococcus aureus CNA binding to collagen.
Embo J., 24, 2005
2F69
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BU of 2f69 by Molmil
Ternary complex of SET7/9 bound to AdoHcy and a TAF10 peptide
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Couture, J.-F, Collazo, E, Hauk, G, Trievel, R.C.
Deposit date:2005-11-28
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for the methylation site specificity of SET7/9
Nat.Struct.Mol.Biol., 13, 2006
2F6A
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BU of 2f6a by Molmil
Collagen Adhesin and Collagen Complex Structure
Descriptor: Collagen, Collagen adhesin
Authors:Zong, Y, Narayana, S.L.V.
Deposit date:2005-11-28
Release date:2006-12-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:A 'Collagen Hug' model for Staphylococcus aureus CNA binding to collagen.
Embo J., 24, 2005

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