PDB: 46188 resultsInfo pagesStatus searchChemie searchBIRD

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6WL5	Crystal structure of EcmrR C-terminal domain Descriptor: 1,2-ETHANEDIOL, CETYL-TRIMETHYL-AMMONIUM, CHLORIDE ION, ... Authors: Yang, Y, Liu, C, Liu, B. Deposit date: 2020-04-18 Release date: 2021-04-07 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structural visualization of transcription activated by a multidrug-sensing MerR family regulator. Nat Commun, 12, 2021
6WNM	The structure of Pf4r from a superinfective isolate of the filamentous phage Pf4 of Pseudomonas aeruginosa PA01 Descriptor: Pf4r, [(2R)-3-{[2-(carboxymethoxy)benzene-1-carbonyl]amino}-2-methoxypropyl](hydroxy)mercury Authors: Michie, K.A, Norrian, P, Duggin, I.G, McDougald, D, Rice, S.A. Deposit date: 2020-04-22 Release date: 2021-04-07 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.58 Å) Cite: The Repressor C Protein, Pf4r, Controls Superinfection of Pseudomonas aeruginosa PAO1 by the Pf4 Filamentous Phage and Regulates Host Gene Expression. Viruses, 13, 2021
6WPZ	The structure of Pf4r from a superinfective isolate of the filamentous phage Pf4 of Pseudomonas aeruginosa PA01 Descriptor: CHLORIDE ION, Pf4r Authors: Michie, K.A, Norrian, P, Duggin, I.G, McDougald, D, Rice, S.A. Deposit date: 2020-04-28 Release date: 2021-04-07 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.993 Å) Cite: The Repressor C Protein, Pf4r, Controls Superinfection of Pseudomonas aeruginosa PAO1 by the Pf4 Filamentous Phage and Regulates Host Gene Expression. Viruses, 13, 2021
5J10	De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity Descriptor: peptide design 2L4HC2_24 Authors: Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G. Deposit date: 2016-03-28 Release date: 2016-05-25 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.02 Å) Cite: De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science, 352, 2016
4IAN	Crystal Structure of apo Human PRPF4B kinase domain Descriptor: SULFATE ION, Serine/threonine-protein kinase PRP4 homolog Authors: Mechin, I, Haas, K, Chen, X, Zhang, Y, McLean, L. Deposit date: 2012-12-06 Release date: 2013-08-28 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (2.44 Å) Cite: Evaluation of Cancer Dependence and Druggability of PRP4 Kinase Using Cellular, Biochemical, and Structural Approaches. J.Biol.Chem., 288, 2013
2ILZ	Crystal structure of poliovirus polymerase complexed with GTP and Mn2+ Descriptor: ACETIC ACID, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ... Authors: Thompson, A.A, Peersen, O.B. Deposit date: 2006-10-03 Release date: 2006-12-12 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions. J.Mol.Biol., 366, 2007
1H4Q	Prolyl-tRNA synthetase from Thermus thermophilus complexed with tRNApro(CGG), ATP and prolinol Descriptor: ADENOSINE-5'-TRIPHOSPHATE, PROLYL-TRNA SYNTHETASE, PYRROLIDINE-2-CARBALDEHYDE, ... Authors: Yaremchuk, A, Tukalo, M, Cusack, S. Deposit date: 2001-05-13 Release date: 2001-06-18 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (3 Å) Cite: A Succession of Substrate Induced Conformational Changes Ensures the Amino Acid Specificity of Thermus Thermophilus Prolyl-tRNA Synthetase: Comparison with Histidyl-tRNA Synthetase J.Mol.Biol., 309, 2001
1GOC	COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION Descriptor: RIBONUCLEASE H Authors: Ishikawa, K, Kimura, S, Nakamura, H, Morikawa, K, Kanaya, S. Deposit date: 1993-05-10 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution. Biochemistry, 32, 1993
5J0J	De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity Descriptor: designed protein 2L6HC3_6 Authors: Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G. Deposit date: 2016-03-28 Release date: 2016-05-25 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.256 Å) Cite: De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science, 352, 2016
2ION	Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form2 Descriptor: GLYCEROL, Programmed Cell Death 4, Pdcd4 Authors: Wlodawer, A, LaRonde-LeBlanc, N.A. Deposit date: 2006-10-10 Release date: 2006-11-14 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.57 Å) Cite: Structural basis for inhibition of translation by the tumor suppressor pdcd4. Mol.Cell.Biol., 27, 2007
5TBK	Crystal structure of human importin a3 bound to RCC1 Descriptor: Importin subunit alpha-3, Regulator of chromosome condensation Authors: Sankhala, R.S, Lokareddy, R.K, Pumroy, R.A, Cingolani, G. Deposit date: 2016-09-12 Release date: 2017-09-13 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.45 Å) Cite: Three-dimensional context rather than NLS amino acid sequence determines importin alpha subtype specificity for RCC1. Nat Commun, 8, 2017
5J4Y	The crystal structure of N-(4-(2-(thiazolo[5,4-c]pyridin-2-yl)phenoxy)phenyl)acetamide bound to JCV Helicase Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Large T antigen, N-{4-[2-([1,3]thiazolo[5,4-c]pyridin-2-yl)phenoxy]phenyl}acetamide, ... Authors: Ter Haar, E. Deposit date: 2016-04-01 Release date: 2016-07-20 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.59 Å) Cite: Fragment-Based Discovery of Dual JC Virus and BK Virus Helicase Inhibitors. J.Med.Chem., 59, 2016
6BEB	Crystal structure of VACV D13 in complex with Rifamycin SV Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Scaffold protein D13, ... Authors: Garriga, D, Accurso, C, Coulibaly, F. Deposit date: 2017-10-25 Release date: 2018-07-18 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EM4	State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ... Authors: Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R. Deposit date: 2017-10-01 Release date: 2017-12-27 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes. Cell, 171, 2017
6BEH	Crystal structure of VACV D13 in complex with Rifapentine Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, RIFAPENTINE, ... Authors: Garriga, D, Accurso, C, Coulibaly, F. Deposit date: 2017-10-25 Release date: 2018-07-18 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2IM0	Crystal structure of poliovirus polymerase complexed with CTP and Mg2+ Descriptor: ACETIC ACID, CYTIDINE-5'-TRIPHOSPHATE, SODIUM ION, ... Authors: Thompson, A.A, Peersen, O.B. Deposit date: 2006-10-03 Release date: 2006-12-12 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions. J.Mol.Biol., 366, 2007
4I15	Crystal structure of TbrPDEB1 Descriptor: Class 1 phosphodiesterase PDEB1, MAGNESIUM ION, ZINC ION Authors: Wang, H, Ke, H. Deposit date: 2012-11-20 Release date: 2013-03-13 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Discovery of Novel Trypanosoma brucei Phosphodiesterase B1 Inhibitors by Virtual Screening against the Unliganded TbrPDEB1 Crystal Structure. J.Med.Chem., 56, 2013
4I2W	Crystal structure of the myosin chaperone UNC-45 from C.elegans in complex with a Hsp70 peptide Descriptor: Heat shock 70 kDa protein A, Protein UNC-45 Authors: Clausen, T, Gazda, L, Hellerschmied, D. Deposit date: 2012-11-23 Release date: 2013-03-13 Method: X-RAY DIFFRACTION (3.6 Å) Cite: The myosin chaperone UNC-45 is organized in tandem modules to support myofilament formation in C. elegans. Cell(Cambridge,Mass.), 152, 2013
2E8C	Crystal structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 Descriptor: Hypothetical protein Aq_1549 Authors: Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-01-19 Release date: 2008-01-22 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 To be Published
6BEF	Crystal structure of VACV D13 in complex with 3-formyl rifamycin SV Descriptor: (2S,12Z,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-8-formyl-5,6,9,17,19-pentahydroxy-23-methoxy-2,4,12,16,18,20,22-heptam ethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-21-yl acetate, 1,2-ETHANEDIOL, FORMIC ACID, ... Authors: Garriga, D, Accurso, C, Coulibaly, F. Deposit date: 2017-10-25 Release date: 2018-07-18 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.21 Å) Cite: Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2IGB	Crystal Structure of PyrR, The Regulator Of The Pyrimidine Biosynthetic Operon In Bacillus caldolyticus, UMP-bound form Descriptor: 1,2-ETHANEDIOL, PyrR bifunctional protein, URIDINE-5'-MONOPHOSPHATE Authors: Chander, P, Switzer, R.L, Smith, J.L. Deposit date: 2006-09-22 Release date: 2007-09-25 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.68 Å) Cite: PyrR, the regulator of the pyrimidine biosynthetic operon in Bacillus caldolyticus To be Published
5J73	De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity Descriptor: protein design 2L4HC2_9 Authors: Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G. Deposit date: 2016-04-05 Release date: 2016-05-25 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.56 Å) Cite: De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science, 352, 2016
1GOA	COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION Descriptor: RIBONUCLEASE H Authors: Ishikawa, K, Kimura, S, Nakamura, H, Morikawa, K, Kanaya, S. Deposit date: 1993-05-10 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution. Biochemistry, 32, 1993
6O9R	The capsid structure of empty AAVrh.10 particles Descriptor: Capsid protein VP1 Authors: Mietzsch, M, Agbandje-McKenna, M. Deposit date: 2019-03-14 Release date: 2019-12-11 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (2.75 Å) Cite: Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8. J.Virol., 94, 2020
2ILY	Crystal structure of poliovirus polymerase complexed with ATP and Mg2+ Descriptor: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Poliovirus polymerase, ... Authors: Thompson, A.A, Peersen, O.B. Deposit date: 2006-10-03 Release date: 2006-12-12 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions. J.Mol.Biol., 366, 2007

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