Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7DDZ
DownloadVisualize
BU of 7ddz by Molmil
The Crystal Structure of Human Neuropeptide Y Y2 Receptor with JNJ-31020028
Descriptor: FLAVIN MONONUCLEOTIDE, Human Neuropeptide Y Y2 Receptor fusion protein, ~{N}-[4-[4-[(1~{S})-2-(diethylamino)-2-oxidanylidene-1-phenyl-ethyl]piperazin-1-yl]-3-fluoranyl-phenyl]-2-pyridin-3-yl-benzamide
Authors:Tang, T, Han, S, Zhao, Q, Wu, B.
Deposit date:2020-10-30
Release date:2021-01-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for ligand recognition of the neuropeptide Y Y 2 receptor.
Nat Commun, 12, 2021
7D9S
DownloadVisualize
BU of 7d9s by Molmil
Structure of huamn soluble guanylate cyclase in the YC1 and NO-bound state
Descriptor: Guanylate cyclase soluble subunit alpha-1, Guanylate cyclase soluble subunit beta-1, MAGNESIUM ION, ...
Authors:Chen, L, Liu, R, Kang, Y.
Deposit date:2020-10-14
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Activation mechanism of human soluble guanylate cyclase by stimulators and activators.
Nat Commun, 12, 2021
4K4E
DownloadVisualize
BU of 4k4e by Molmil
Co-crystal structure of tnks1 with compound 52 [N~2-(5-chloro-2-methoxyphenyl)-N-[trans-4-(2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)cyclohexyl]glycinamide]
Descriptor: N~2~-(5-chloro-2-methoxyphenyl)-N-[trans-4-(2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)cyclohexyl]glycinamide, Tankyrase-1, ZINC ION
Authors:Huang, X.
Deposit date:2013-04-12
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of novel, induced-pocket binding oxazolidinones as potent, selective, and orally bioavailable tankyrase inhibitors.
J.Med.Chem., 56, 2013
3L2N
DownloadVisualize
BU of 3l2n by Molmil
Crystal structure of Putative carboxypeptidase A (YP_562911.1) from SHEWANELLA DENITRIFICANS OS-217 at 2.39 A resolution
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-12-15
Release date:2009-12-29
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of Putative carboxypeptidase A (YP_562911.1) from SHEWANELLA DENITRIFICANS OS-217 at 2.39 A resolution
To be published
4GRZ
DownloadVisualize
BU of 4grz by Molmil
Crystal structure of SHP1 catalytic domain with PO4
Descriptor: PHOSPHATE ION, Tyrosine-protein phosphatase non-receptor type 6
Authors:Alicea-Velazquez, N.L, Jakoncic, J, Boggon, T.J.
Deposit date:2012-08-27
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3732 Å)
Cite:Structure-guided studies of the SHP-1/JAK1 interaction provide new insights into phosphatase catalytic domain substrate recognition.
J.Struct.Biol., 181, 2013
3KWE
DownloadVisualize
BU of 3kwe by Molmil
Inactive truncation of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM, form 2
Descriptor: CHLORIDE ION, Carbon dioxide concentrating mechanism protein, HEXANE-1,6-DIOL, ...
Authors:Kimber, M.S, Castel, S.E, Pena, K.L.
Deposit date:2009-12-01
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural basis of the oxidative activation of the carboxysomal {gamma}-carbonic anhydrase, CcmM.
Proc.Natl.Acad.Sci.USA, 107, 2010
7DF7
DownloadVisualize
BU of 7df7 by Molmil
Crystal structure of human V-1 in the apo form
Descriptor: Myotrophin
Authors:Takeda, S, Nagae, T.
Deposit date:2020-11-06
Release date:2021-01-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human V-1 in the apo form.
Acta Crystallogr.,Sect.F, 77, 2021
7KQ6
DownloadVisualize
BU of 7kq6 by Molmil
Crystal Structure of Acetyl-coenzyme A synthetase from Coccidioides immitis in complex with PRX
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER, Acetyl-coenzyme A synthetase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-11-13
Release date:2020-12-09
Last modified:2025-10-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Acetyl-coenzyme A synthetase synthetase from Coccidioides immitis in complex with PRX
to be published
1UDV
DownloadVisualize
BU of 1udv by Molmil
Crystal structure of the hyperthermophilic archaeal dna-binding protein Sso10b2 at 1.85 A
Descriptor: DNA binding protein SSO10b, ZINC ION
Authors:Chou, C.-C, Lin, T.-W, Chen, C.-Y, Wang, A.H.J.
Deposit date:2003-05-07
Release date:2003-08-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the hyperthermophilic archaeal DNA-binding protein Sso10b2 at a resolution of 1.85 Angstroms
J.BACTERIOL., 185, 2003
2L8U
DownloadVisualize
BU of 2l8u by Molmil
NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)2 Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1 - UU pair with one hydrogen bond pair
Descriptor: RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3')
Authors:Parkesh, R, Fountain, M.A, Disney, M.D.
Deposit date:2011-01-25
Release date:2011-02-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)(2) Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1.
Biochemistry, 50, 2011
9API
DownloadVisualize
BU of 9api by Molmil
THE S VARIANT OF HUMAN ALPHA1-ANTITRYPSIN, STRUCTURE AND IMPLICATIONS FOR FUNCTION AND METABOLISM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA 1-ANTITRYPSIN, ...
Authors:Loebermann, H, Tokuoka, R, Deisenhofer, J, Huber, R.
Deposit date:1988-09-08
Release date:1990-10-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:The S variant of human alpha 1-antitrypsin, structure and implications for function and metabolism.
Protein Eng., 2, 1989
6JJ1
DownloadVisualize
BU of 6jj1 by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 0.97 A resolution with disordered five N-terminal residues
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Peptidyl-tRNA hydrolase
Authors:Iqbal, N, Sharma, P, Chaudhary, A, Sharma, S, Singh, T.P.
Deposit date:2019-02-24
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 0.97 A resolution with disordered five N-terminal residues
To Be Published
2XYU
DownloadVisualize
BU of 2xyu by Molmil
Crystal structure of EphA4 kinase domain in complex with VUF 12058
Descriptor: 5-(5-FLUORO-2-METHYLPHENYL)-6,7,8,9-TETRAHYDRO-3H-PYRAZOLO[3,4-C]ISOQUINOLIN-1-AMINE, EPHRIN TYPE-A RECEPTOR 4,, GLYCEROL
Authors:Farenc, C.J.A, Celie, P.H.N, vanLinden, O.P.J, Siegal, G.
Deposit date:2010-11-19
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.117 Å)
Cite:Fragment Based Lead Discovery of Small Molecule Inhibitors for the Epha4 Receptor Tyrosine Kinase.
Eur.J.Med.Chem., 47, 2012
1UF5
DownloadVisualize
BU of 1uf5 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-methionine
Descriptor: 1,2-ETHANEDIOL, 4-METHYLSULFANYL-2-UREIDO-BUTYRIC ACID, N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-23
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of C171A/V236A mutant of N-carbamyl-D-amino acid amidohydrolase
To be published
3PNX
DownloadVisualize
BU of 3pnx by Molmil
Crystal structure of a putative sulfurtransferase dsrE (Swol_2425) from Syntrophomonas wolfei str. Goettingen at 1.92 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Putative sulfurtransferase dsrE, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-11-19
Release date:2010-12-15
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of a putative sulfurtransferase dsrE (Swol_2425) from Syntrophomonas wolfei str. Goettingen at 1.92 A resolution
To be published
3ZDU
DownloadVisualize
BU of 3zdu by Molmil
Crystal structure of the human CDKL3 kinase domain
Descriptor: 1,2-ETHANEDIOL, CYCLIN-DEPENDENT KINASE-LIKE 3, SODIUM ION, ...
Authors:Canning, P, Elkins, J.M, Goubin, S, Mahajan, P, Pike, A.C.W, Quigley, A, MacKenzie, A, Carpenter, E.P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2012-11-30
Release date:2013-03-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CDKL Family Kinases Have Evolved Distinct Structural Features and Ciliary Function.
Cell Rep, 22, 2018
1D02
DownloadVisualize
BU of 1d02 by Molmil
CRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA
Descriptor: DNA (5'-D(*GP*CP*CP*AP*AP*TP*TP*GP*GP*C)-3'), TYPE II RESTRICTION ENZYME MUNI
Authors:Deibert, M, Grazulis, S, Janulaitis, A, Siksnys, V, Huber, R.
Deposit date:1999-09-08
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of MunI restriction endonuclease in complex with cognate DNA at 1.7 A resolution.
EMBO J., 18, 1999
5VSD
DownloadVisualize
BU of 5vsd by Molmil
Structure of human GLP SET-domain (EHMT1) in complex with inhibitor 13
Descriptor: 1,4-DIETHYLENE DIOXIDE, 6,7-dimethoxy-N~2~-methyl-N~4~-(1-methylpiperidin-4-yl)-N~2~-propylquinazoline-2,4-diamine, GLYCEROL, ...
Authors:Babault, N, Xiong, Y, Liu, J, Jin, J.
Deposit date:2017-05-11
Release date:2017-07-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-activity relationship studies of G9a-like protein (GLP) inhibitors.
Bioorg. Med. Chem., 25, 2017
6JOO
DownloadVisualize
BU of 6joo by Molmil
Crystal structure of Corynebacterium diphtheriae Cas9 in complex with sgRNA and target DNA
Descriptor: 1,2-ETHANEDIOL, CRISPR-associated protein,CRISPR-associated endonuclease Cas9, Guide RNA, ...
Authors:Hirano, S, Ishitani, R, Nishimasu, H, Nureki, O.
Deposit date:2019-03-22
Release date:2019-04-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9.
Nat Commun, 10, 2019
9AXM
DownloadVisualize
BU of 9axm by Molmil
Crystal structure of ARAF/MEK1 complex with NST-628 and a RAF dimer
Descriptor: 1,2-ETHANEDIOL, Dual specificity mitogen-activated protein kinase kinase 1, GLYCEROL, ...
Authors:Quade, B, Huang, X.
Deposit date:2024-03-06
Release date:2024-04-17
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:The Pan-RAF-MEK Nondegrading Molecular Glue NST-628 Is a Potent and Brain-Penetrant Inhibitor of the RAS-MAPK Pathway with Activity across Diverse RAS- and RAF-Driven Cancers.
Cancer Discov, 14, 2024
1OVA
DownloadVisualize
BU of 1ova by Molmil
CRYSTAL STRUCTURE OF UNCLEAVED OVALBUMIN AT 1.95 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, OVALBUMIN
Authors:Stein, P.E, Leslie, A.G.W.
Deposit date:1990-11-26
Release date:1992-04-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of uncleaved ovalbumin at 1.95 A resolution.
J.Mol.Biol., 221, 1991
3PX2
DownloadVisualize
BU of 3px2 by Molmil
Structure of TylM1 from Streptomyces fradiae H123N mutant in complex with SAH and dTDP-Quip3N
Descriptor: 1,2-ETHANEDIOL, N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Holden, H.M, Carney, A.E.
Deposit date:2010-12-09
Release date:2010-12-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular Architecture of TylM1 from Streptomyces fradiae: An N,N-Dimethyltransferase Involved in the Production of dTDP-d-mycaminose .
Biochemistry, 50, 2011
3ZGE
DownloadVisualize
BU of 3zge by Molmil
Greater efficiency of photosynthetic carbon fixation due to single amino acid substitution
Descriptor: 1,2-ETHANEDIOL, ASPARTIC ACID, C4 PHOSPHOENOLPYRUVATE CARBOXYLASE, ...
Authors:Paulus, J.K, Schlieper, D, Groth, G.
Deposit date:2012-12-17
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Greater Efficiency of Photosynthetic Carbon Fixation due to Single Amino Acid Substitution
Nat.Commun., 4, 2013
1D58
DownloadVisualize
BU of 1d58 by Molmil
THE MOLECULAR STRUCTURE OF A 4'-EPIADRIAMYCIN COMPLEX WITH D(TGATCA) AT 1.7 ANGSTROM RESOLUTION-COMPARISON WITH THE STRUCTURE OF 4'-EPIADRIAMYCIN D(TGTACA) AND D(CGATCG) COMPLEXES
Descriptor: 4'-EPIDOXORUBICIN, DNA (5'-D(*TP*GP*AP*TP*CP*A)-3')
Authors:Langlois D'Estaintot, B, Gallois, B, Brown, T, Hunter, W.N.
Deposit date:1992-02-20
Release date:1992-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The molecular structure of a 4'-epiadriamycin complex with d(TGATCA) at 1.7A resolution: comparison with the structure of 4'-epiadriamycin d(TGTACA) and d(CGATCG) complexes.
Nucleic Acids Res., 20, 1992
6MLY
DownloadVisualize
BU of 6mly by Molmil
Bifunctional GH43-CE Bacteroides eggerthii, BACEGG_01304
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Bifunctional GH43-CE protein, ...
Authors:Koropatkin, N.M, Pereira, G.V, Cann, I.
Deposit date:2018-09-28
Release date:2019-10-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Degradation of complex arabinoxylans by human colonic Bacteroidetes
Nat Commun, 2021

243911

건을2025-10-29부터공개중

PDB statisticsPDBj update infoContact PDBjnumon