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6ATY
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BU of 6aty by Molmil
Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor: GLYCEROL, Venom protein 51.1
Authors:Gewe, M.M, Rupert, P, Strong, R.K.
Deposit date:2017-08-29
Release date:2018-08-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
To Be Published
1DF6
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BU of 1df6 by Molmil
1H NMR SOLUTION STRUCTURE OF CYCLOVIOLACIN O1
Descriptor: CYCLOVIOLACIN O1
Authors:Craik, D.J, Daly, N.L, Bond, T, Waine, C.
Deposit date:1999-11-17
Release date:2000-03-01
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Plant cyclotides: A unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif.
J.Mol.Biol., 294, 1999
2M2H
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BU of 2m2h by Molmil
Solution structure of the antimicrobial peptide [Aba3,7,12,16]BTD-2
Descriptor: [Aba3,7,12,16]BTD-2
Authors:Conibear, A.C, Rosengren, K, Daly, N.L, Troiera Henriques, S, Craik, D.J.
Deposit date:2012-12-20
Release date:2013-02-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The cyclic cystine ladder in theta-defensins is important for structure and stability, but not antibacterial activity.
J.Biol.Chem., 288, 2013
2M2G
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BU of 2m2g by Molmil
Solution structure of the antimicrobial peptide [Aba3,16]BTD-2
Descriptor: [Aba3,16]BTD-2
Authors:Conibear, A.C, Rosengren, K, Daly, N.L, Troiera Henriques, S, Craik, D.J.
Deposit date:2012-12-20
Release date:2013-02-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The cyclic cystine ladder in theta-defensins is important for structure and stability, but not antibacterial activity.
J.Biol.Chem., 288, 2013
4R05
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BU of 4r05 by Molmil
Crystal structure of the refolded DENV3 methyltransferase
Descriptor: Nonstructural protein NS5
Authors:Brecher, M.B, Li, Z, Zhang, J, Chen, H, Lin, Q, Liu, B, Li, H.M.
Deposit date:2014-07-29
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Refolding of a fully functional flavivirus methyltransferase revealed that S-adenosyl methionine but not S-adenosyl homocysteine is copurified with flavivirus methyltransferase.
Protein Sci., 24, 2015
2HRV
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BU of 2hrv by Molmil
2A CYSTEINE PROTEINASE FROM HUMAN RHINOVIRUS 2
Descriptor: 2A CYSTEINE PROTEINASE, ZINC ION
Authors:Petersen, J.F.W, Cherney, M.M, Liebig, H.-D, Skern, T, Kuechler, E, James, M.N.G.
Deposit date:1999-04-29
Release date:2000-05-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The structure of the 2A proteinase from a common cold virus: a proteinase responsible for the shut-off of host-cell protein synthesis.
EMBO J., 18, 1999
7UJH
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BU of 7ujh by Molmil
Structure of the P130R single variant of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP and glycine
Descriptor: 1,2-ETHANEDIOL, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine hydroxymethyltransferase
Authors:Korasick, D.A, Beamer, L.J.
Deposit date:2022-03-30
Release date:2023-04-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance.
Febs J., 291, 2024
7UJI
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BU of 7uji by Molmil
Structure of the P130R single variant of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP
Descriptor: 1,2-ETHANEDIOL, Serine hydroxymethyltransferase
Authors:Korasick, D.A, Beamer, L.J.
Deposit date:2022-03-30
Release date:2023-04-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance.
Febs J., 291, 2024
9MDK
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BU of 9mdk by Molmil
Crystal Structure of E64-inhibited C0362 (TDE_0362 [TDE0362] resi 205-647)
Descriptor: 1,2-ETHANEDIOL, Bacterial Ig-like domain protein C0362, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE
Authors:Clark, N.D, Malkowski, M.G.
Deposit date:2024-12-05
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.
Acta Crystallogr.,Sect.F, 81, 2025
9MDM
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BU of 9mdm by Molmil
Crystal Structure of C412S Mutant of C0362 (TDE_0362 [TDE0362] resi 205-647)
Descriptor: 1,2-ETHANEDIOL, Bacterial Ig-like domain protein C0362, PHOSPHATE ION, ...
Authors:Clark, N.D, Malkowski, M.G.
Deposit date:2024-12-05
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.
Acta Crystallogr.,Sect.F, 81, 2025
9MDO
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BU of 9mdo by Molmil
Crystal Structure of Y559A Prosegment Binding Loop Mutant of C0362 (TDE_0362 [TDE0362] resi 205-647)
Descriptor: 1,2-ETHANEDIOL, Bacterial Ig-like domain protein C0362, CHLORIDE ION
Authors:Clark, N.D, Malkowski, M.G.
Deposit date:2024-12-05
Release date:2025-02-12
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.
Acta Crystallogr.,Sect.F, 81, 2025
2Y4N
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BU of 2y4n by Molmil
PaaK1 in complex with phenylacetyl adenylate
Descriptor: 2-PHENYLACETIC ACID, 5'-O-[HYDROXY(PHENYLACETYL)PHOSPHORYL]ADENOSINE, BETA-MERCAPTOETHANOL, ...
Authors:Law, A, Boulanger, M.J.
Deposit date:2011-01-07
Release date:2011-03-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Defining a Structural and Kinetic Rationale for Paralogous Copies of Phenylacetate-Coa Ligases from the Cystic Fibrosis Pathogen Burkholderia Cenocepacia J2315.
J.Biol.Chem., 286, 2011
7OT7
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BU of 7ot7 by Molmil
sTIM11noCys-SB, a de novo designed TIM barrel with a salt-bridge cluster (crystal form 2)
Descriptor: sTIM11noCys-SB
Authors:Romero-Romero, S, Kordes, S, Hocker, B.
Deposit date:2021-06-09
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:A newly introduced salt bridge cluster improves structural and biophysical properties of de novo TIM barrels.
Protein Sci., 31, 2022
1GPO
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BU of 1gpo by Molmil
CRYSTAL STRUCTURE OF THE RATIONALLY DESIGNED ANTIBODY M41 AS A FAB FRAGMENT
Descriptor: ANTIBODY M41, SULFATE ION
Authors:Schiweck, W, Skerra, A.
Deposit date:1997-03-27
Release date:1998-04-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The rational construction of an antibody against cystatin: lessons from the crystal structure of an artificial Fab fragment.
J.Mol.Biol., 268, 1997
1JPY
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BU of 1jpy by Molmil
Crystal structure of IL-17F
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hymowitz, S.G, Filvaroff, E.H, Yin, J, Lee, J, Cai, L, Risser, P, Maruoka, M, Mao, W, Foster, J, Kelley, R, Pan, G, Gurney, A.L, de Vos, A.M, Starovasnik, M.A.
Deposit date:2001-08-03
Release date:2001-09-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:IL-17s adopt a cystine knot fold: structure and activity of a novel cytokine, IL-17F, and implications for receptor binding.
EMBO J., 20, 2001
5J94
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BU of 5j94 by Molmil
Human cathepsin K mutant C25S in complex with the allosteric effector NSC13345
Descriptor: 2-{[(carbamoylsulfanyl)acetyl]amino}benzoic acid, Cathepsin K, SULFATE ION
Authors:Novinec, M, Korenc, M, Lenarcic, B, Baici, A.
Deposit date:2016-04-08
Release date:2016-04-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.22002459 Å)
Cite:A novel allosteric mechanism in the cysteine peptidase cathepsin K discovered by computational methods.
Nat Commun, 5, 2014
2Y27
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BU of 2y27 by Molmil
crystal structure of PaaK1 in complex with ATP from Burkholderia cenocepacia
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, BETA-MERCAPTOETHANOL, GLYCEROL, ...
Authors:Law, A, Boulanger, M.J.
Deposit date:2010-12-13
Release date:2011-05-04
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Defining a Structural and Kinetic Rationale for Paralogous Copies of Phenylacetate-Coa Ligases from the Cystic Fibrosis Pathogen Burkholderia Cenocepacia J2315.
J.Biol.Chem., 286, 2011
1OWM
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BU of 1owm by Molmil
DATA1:DNA photolyase / received X-rays dose 1.2 exp15 photons/mm2
Descriptor: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
Authors:Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
Deposit date:2003-03-28
Release date:2004-04-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
1OWN
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BU of 1own by Molmil
DATA3:DNA photolyase / received X-rays dose 4.8 exp15 photons/mm2
Descriptor: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
Authors:Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
Deposit date:2003-03-28
Release date:2004-04-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
2Y4O
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BU of 2y4o by Molmil
Crystal Structure of PaaK2 in complex with phenylacetyl adenylate
Descriptor: 5'-O-[HYDROXY(PHENYLACETYL)PHOSPHORYL]ADENOSINE, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Law, A, Boulanger, M.J.
Deposit date:2011-01-07
Release date:2011-03-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Defining a Structural and Kinetic Rationale for Paralogous Copies of Phenylacetate-Coa Ligases from the Cystic Fibrosis Pathogen Burkholderia Cenocepacia J2315.
J.Biol.Chem., 286, 2011
1DXK
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BU of 1dxk by Molmil
Metallo-beta-lactamase from Bacillus cereus 569/H/9 C168S mutant
Descriptor: BICARBONATE ION, CLASS B BETA-LACTAMASE, ZINC ION
Authors:Chantalat, L, Duee, E, Dideberg, O.
Deposit date:2000-01-10
Release date:2000-08-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural effects of the active site mutation cysteine to serine in Bacillus cereus zinc-beta-lactamase.
Protein Sci., 9, 2000
1OWP
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BU of 1owp by Molmil
DATA6:photoreduced DNA pholyase / received X-rays dose 4.8 exp15 photons/mm2
Descriptor: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
Authors:Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
Deposit date:2003-03-28
Release date:2004-04-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
2N8E
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BU of 2n8e by Molmil
Three-dimensional structure of cyclic PVIIA
Descriptor: Kappa-conotoxin PVIIA
Authors:Kwon, S, Schroeder, C, Craik, D.
Deposit date:2015-10-13
Release date:2016-08-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Efficient enzymatic cyclization of an inhibitory cystine knot-containing peptide.
Biotechnol.Bioeng., 113, 2016
1OWO
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BU of 1owo by Molmil
DATA4:photoreduced DNA photolyase / received X-rays dose 1.2 exp15 photons/mm2
Descriptor: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
Authors:Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
Deposit date:2003-03-28
Release date:2004-04-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
4COM
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BU of 4com by Molmil
Crystal structure of the anaerobic ribonucleotide reductase from Thermotoga maritima with MES in the active site
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE, PENTAETHYLENE GLYCOL, ...
Authors:Aurelius, O, Johansson, R, Bagenholm, V, Beck, T, Balhuizen, A, Lundin, D, Sjoberg, B.M, Mulliez, E, Logan, D.T.
Deposit date:2014-01-29
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The Crystal Structure of Thermotoga Maritima Class III Ribonucleotide Reductase Lacks a Radical Cysteine Pre-Positioned in the Active Site.
Plos One, 10, 2015

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