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1GEU
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BU of 1geu by Molmil
ANATOMY OF AN ENGINEERED NAD-BINDING SITE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Mittl, P.R.E, Schulz, G.E.
Deposit date:1994-01-18
Release date:1994-11-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Anatomy of an engineered NAD-binding site.
Protein Sci., 3, 1994
1FWI
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BU of 1fwi by Molmil
KLEBSIELLA AEROGENES UREASE, H134A VARIANT
Descriptor: NICKEL (II) ION, UREASE
Authors:Pearson, M.A, Karplus, P.A.
Deposit date:1997-04-23
Release date:1997-10-15
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of the mononickel metallocenter in H134A mutant urease.
J.Biol.Chem., 271, 1996
1L0K
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BU of 1l0k by Molmil
METHIONINE CORE MUTANT OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME
Authors:Gassner, N.C, Baase, W.A, Mooers, B.H, Busam, R.D, Weaver, L.H, Lindstrom, J.D, Quillin, M.L, Matthews, B.W.
Deposit date:2002-02-11
Release date:2003-06-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Multiple methionine substitutions are tolerated in T4 lysozyme and have coupled effects on folding and stability
BIOPHYS.CHEM., 100, 2003
1L13
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BU of 1l13 by Molmil
CONTRIBUTIONS OF HYDROGEN BONDS OF THR 157 TO THE THERMODYNAMIC STABILITY OF PHAGE T4 LYSOZYME
Descriptor: T4 LYSOZYME
Authors:Dao-Pin, S, Alber, T, Matthews, B.W.
Deposit date:1988-02-05
Release date:1988-04-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Contributions of hydrogen bonds of Thr 157 to the thermodynamic stability of phage T4 lysozyme.
Nature, 330, 1987
1FDO
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BU of 1fdo by Molmil
OXIDIZED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, FORMATE DEHYDROGENASE H, IRON/SULFUR CLUSTER, ...
Authors:Sun, P.D, Boyington, J.C.
Deposit date:1997-01-27
Release date:1997-08-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of formate dehydrogenase H: catalysis involving Mo, molybdopterin, selenocysteine, and an Fe4S4 cluster.
Science, 275, 1997
1L17
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BU of 1l17 by Molmil
HYDROPHOBIC STABILIZATION IN T4 LYSOZYME DETERMINED DIRECTLY BY MULTIPLE SUBSTITUTIONS OF ILE 3
Descriptor: T4 LYSOZYME
Authors:Matsumura, M, Dao-Pin, S, Matthews, B.W.
Deposit date:1989-05-01
Release date:1990-01-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hydrophobic stabilization in T4 lysozyme determined directly by multiple substitutions of Ile 3.
Nature, 334, 1988
2CCQ
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BU of 2ccq by Molmil
The PUB domain functions as a p97 binding module in human peptide N-glycanase.
Descriptor: GLYCEROL, PEPTIDE N-GLYCANASE HOMOLOG
Authors:Allen, M.D, Buchberger, A, Bycroft, M.
Deposit date:2006-01-17
Release date:2006-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Pub Domain Functions as a P97 Binding Module in Human Peptide N-Glycanase.
J.Biol.Chem., 281, 2006
7YKE
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BU of 7yke by Molmil
Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 4,6-sulfate
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4,6-di-O-sulfo-beta-D-galactopyranose, Chondroitin sulfate ABC endolyase, MAGNESIUM ION
Authors:Takashima, M, Watanabe, I, Miyanaga, A, Eguchi, T.
Deposit date:2022-07-22
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Biochemical and crystallographic assessments of the effect of 4,6-O-disulfated disaccharide moieties in chondroitin sulfate E on chondroitinase ABC I activity.
Febs J., 290, 2023
1L1Y
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BU of 1l1y by Molmil
The Crystal Structure and Catalytic Mechanism of Cellobiohydrolase CelS, the Major Enzymatic Component of the Clostridium thermocellum cellulosome
Descriptor: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, cellobiohydrolase
Authors:Guimaraes, B.G, Souchon, H, Lytle, B.L, Wu, J.H.D, Alzari, P.M.
Deposit date:2002-02-20
Release date:2002-07-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure and catalytic mechanism of cellobiohydrolase CelS, the major enzymatic component of the Clostridium thermocellum Cellulosome.
J.Mol.Biol., 320, 2002
1LG9
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BU of 1lg9 by Molmil
Crystal structure of OxyB, a Cytochrome P450 Implicated in an Oxidative Phenol Coupling Reaction During Vancomycin Biosynthesis
Descriptor: P450 monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pylypenko, O, Zerbe, K, Vitali, F, Zhang, W, Vrijbloed, J.W, Robinson, J.A, Schlichting, I.
Deposit date:2002-04-15
Release date:2002-12-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of OxyB, a Cytochrome P450 Implicated in an Oxidative Phenol Coupling Reaction during Vancomycin Biosynthesis.
J.Biol.Chem., 277, 2002
4KO8
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BU of 4ko8 by Molmil
Structure of p97 N-D1 R155H mutant in complex with ATPgS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Xia, D, Tang, W.K.
Deposit date:2013-05-11
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
3GI5
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BU of 3gi5 by Molmil
Crystal structure of protease inhibitor, KB62 in complex with wild type HIV-1 protease
Descriptor: (5S)-3-(3-Acetylphenyl)-N-[(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-methylpropyl)amino]-2-hydroxy-1-(phenylmethyl)pr opyl]-2-oxo-5-oxazolidinecarboxamide, PHOSPHATE ION, Protease
Authors:Nalam, M.N.L, Schiffer, C.A.
Deposit date:2009-03-05
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Evaluating the substrate-envelope hypothesis: structural analysis of novel HIV-1 protease inhibitors designed to be robust against drug resistance.
J.Virol., 84, 2010
1LGU
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BU of 1lgu by Molmil
T4 Lysozyme Mutant L99A/M102Q
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme
Authors:Wei, B.Q, Baase, W.A, Weaver, L.H, Matthews, B.W, Shoichet, B.K.
Deposit date:2002-04-16
Release date:2002-05-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Model Binding Site for Testing Scoring Functions in Molecular Docking
J.Mol.Biol., 322, 2002
1JIP
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BU of 1jip by Molmil
P450eryF(A245S)/ketoconazole
Descriptor: CIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL)PIPERAZINE, CYTOCHROME P450 107A1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cupp-Vickery, J.R, Garcia, C, Hofacre, A, McGee-Estrada, K.
Deposit date:2001-07-02
Release date:2001-10-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ketoconazole-induced conformational changes in the active site of cytochrome P450eryF.
J.Mol.Biol., 311, 2001
2D2F
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BU of 2d2f by Molmil
Crystal structure of atypical cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Watanabe, S, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-09-08
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Atypical Cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8.
J.Mol.Biol., 353, 2005
216D
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BU of 216d by Molmil
CRYSTAL STRUCTURES OF THE B-FORM DNA-RNA CHIMER (5'-D(*IP*)-R(*CP*)-D(*IP*CP*IP*CP*IP*C)-3') COMPLEXED WITH DISTAMYCIN
Descriptor: DISTAMYCIN A, DNA/RNA (5'-D(*IP*)-R(*CP*)-D(*IP*CP*IP*CP*IP*C)-3'), MAGNESIUM ION
Authors:Chen, X, Ramakrishnan, B, Sundaralingam, M.
Deposit date:1995-07-18
Release date:1996-01-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structures of B-form DNA-RNA chimers complexed with distamycin.
Nat.Struct.Biol., 2, 1995
2D4Z
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BU of 2d4z by Molmil
Crystal structure of the cytoplasmic domain of the chloride channel ClC-0
Descriptor: Chloride channel protein
Authors:Dutzler, R, Meyer, S.
Deposit date:2005-10-26
Release date:2006-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the cytoplasmic domain of the chloride channel ClC-0.
Structure, 14, 2006
6JY5
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BU of 6jy5 by Molmil
Structure of CsoS4B from Halothiobacillus neapolitanus
Descriptor: Unidentified carboxysome polypeptide
Authors:Zhao, Y.Y, Jiang, Y.L, Chen, Y, Zhou, C.Z, Li, Q.
Deposit date:2019-04-26
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of pentameric shell protein CsoS4B of Halothiobacillus neapolitanus alpha-carboxysome.
Biochem.Biophys.Res.Commun., 515, 2019
1JJ3
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BU of 1jj3 by Molmil
CRYSTAL STRUCTURE OF MONOCLINIC LYSOZYME GROWN AT PH 4.6
Descriptor: LYSOZYME
Authors:Datta, S, Biswal, B.K, Vijayan, M.
Deposit date:2001-07-03
Release date:2001-11-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The effect of stabilizing additives on the structure and hydration of proteins: a study involving tetragonal lysozyme.
Acta Crystallogr.,Sect.D, 57, 2001
1FDL
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BU of 1fdl by Molmil
CRYSTALLOGRAPHIC REFINEMENT OF THE THREE-DIMENSIONAL STRUCTURE OF THE FAB D1.3-LYSOZYME COMPLEX AT 2.5-ANGSTROMS RESOLUTION
Descriptor: HEN EGG WHITE LYSOZYME, IGG1-KAPPA D1.3 FAB (HEAVY CHAIN), IGG1-KAPPA D1.3 FAB (LIGHT CHAIN)
Authors:Fischmann, T.O, Poljak, R.J.
Deposit date:1990-08-27
Release date:1991-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic refinement of the three-dimensional structure of the FabD1.3-lysozyme complex at 2.5-A resolution.
J.Biol.Chem., 266, 1991
1JMZ
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BU of 1jmz by Molmil
crystal structure of a quinohemoprotein amine dehydrogenase from pseudomonas putida with inhibitor
Descriptor: Amine Dehydrogenase, HEME C, NICKEL (II) ION, ...
Authors:Satoh, A, Miyahara, I, Hirotsu, K.
Deposit date:2001-07-20
Release date:2002-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of quinohemoprotein amine dehydrogenase from Pseudomonas putida. Identification of a novel quinone cofactor encaged by multiple thioether cross-bridges.
J.Biol.Chem., 277, 2002
1YU2
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BU of 1yu2 by Molmil
Major Tropism Determinant M1 Variant
Descriptor: MAGNESIUM ION, Major Tropism Determinant (Mtd-M1)
Authors:McMahon, S.A, Miller, J.L, Lawton, J.A, Ghosh, P.
Deposit date:2005-02-11
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The C-type lectin fold as an evolutionary solution for massive sequence variation
Nat.Struct.Mol.Biol., 12, 2005
3WG8
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BU of 3wg8 by Molmil
Crystal structure of the abscisic acid receptor PYR1 in complex with an antagonist AS6
Descriptor: (2Z,4E)-5-[(1S)-3-(hexylsulfanyl)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYR1
Authors:Akiyama, T, Sue, M, Takeuchi, J, Okamoto, M, Muto, T, Endo, A, Nambara, E, Hirai, N, Ohnishi, T, Cutler, S.R, Todoroki, Y, Yajima, S.
Deposit date:2013-07-31
Release date:2014-05-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Designed abscisic acid analogs as antagonists of PYL-PP2C receptor interactions
Nat.Chem.Biol., 10, 2014
5DEX
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BU of 5dex by Molmil
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist, phenyl-ACEPC
Descriptor: 5-[(2R)-2-amino-2-carboxyethyl]-1-phenyl-1H-pyrazole-3-carboxylic acid, GLYCINE, Glutamate receptor ionotropic, ...
Authors:Mou, T.-C, Conti, P, Pinto, A, Tamborini, L, Sprang, S.R, Hansen, K.B.
Deposit date:2015-08-26
Release date:2016-09-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of subunit selectivity for competitive NMDA receptor antagonists with preference for GluN2A over GluN2B subunits.
Proc. Natl. Acad. Sci. U.S.A., 2017
1JQI
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Crystal Structure of Rat Short Chain Acyl-CoA Dehydrogenase Complexed With Acetoacetyl-CoA
Descriptor: ACETOACETYL-COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, short chain acyl-CoA dehydrogenase
Authors:Battaile, K.P, Molin-Case, J, Paschke, R, Wang, M, Bennett, D, Vockley, J, Kim, J.-J.P.
Deposit date:2001-08-07
Release date:2002-02-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of rat short chain acyl-CoA dehydrogenase complexed with acetoacetyl-CoA: comparison with other acyl-CoA dehydrogenases.
J.Biol.Chem., 277, 2002

224004

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