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PDB: 284 results

2MOR
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BU of 2mor by Molmil
A tensor-free method for the structural and dynamical refinement of proteins using residual dipolar couplings
Descriptor: Ubiquitin
Authors:Camilloni, C, Vendruscolo, M.
Deposit date:2014-04-29
Release date:2014-06-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A Tensor-Free Method for the Structural and Dynamical Refinement of Proteins using Residual Dipolar Couplings.
J.Phys.Chem.B, 119, 2015
2JRI
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BU of 2jri by Molmil
Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule.
Descriptor: Ataxin-3, UBC protein
Authors:Nicastro, G, Masino, L, Esposito, V, Menon, R, Pastore, A.
Deposit date:2007-06-27
Release date:2008-07-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Understanding the plasticity of the ubiquitin-protein recognition code: the josephin domain of ataxin-3 is a diubiquitin binding motif
To be Published
2JY6
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BU of 2jy6 by Molmil
Solution structure of the complex of ubiquitin and ubiquilin 1 UBA domain
Descriptor: Ubiquilin-1, Ubiquitin protein
Authors:Zhang, D, Raasi, S, Fushman, D.
Deposit date:2007-12-06
Release date:2008-03-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Affinity makes the difference: nonselective interaction of the UBA domain of Ubiquilin-1 with monomeric ubiquitin and polyubiquitin chains
J.Mol.Biol., 377, 2008
1C3T
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BU of 1c3t by Molmil
ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY
Descriptor: PROTEIN (1D8 UBIQUITIN)
Authors:Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M.
Deposit date:1999-07-28
Release date:1999-08-20
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Rotamer strain as a determinant of protein structural specificity.
Protein Sci., 8, 1999
2N2K
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BU of 2n2k by Molmil
Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligand
Descriptor: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ubiquitin
Authors:Liu, Z, Gong, Z, Tang, C.
Deposit date:2015-05-10
Release date:2015-07-08
Last modified:2015-09-23
Method:SOLUTION NMR
Cite:Lys63-linked ubiquitin chain adopts multiple conformational states for specific target recognition.
Elife, 4, 2015
2RU6
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BU of 2ru6 by Molmil
The pure alternative state of ubiquitin
Descriptor: Ubiquitin
Authors:Kitazawa, S, Kameda, T, Kumo, A, Utsumi, M, Baxter, N, Kato, K, Williamson, M.P, Kitahara, R.
Deposit date:2013-12-04
Release date:2014-02-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Close Identity between Alternatively Folded State N2 of Ubiquitin and the Conformation of the Protein Bound to the Ubiquitin-Activating Enzyme
Biochemistry, 53, 2014
2K25
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BU of 2k25 by Molmil
Automated NMR Structure of the UBB by FAPSY
Descriptor: UBB
Authors:Lee, W, Jung, J, Lee, W.
Deposit date:2008-03-24
Release date:2008-09-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Automated Suite for Protein Structure by NMR Spectroscopy
To be Published
1GJZ
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BU of 1gjz by Molmil
Solution structure of a dimeric N-terminal fragment of human ubiquitin
Descriptor: UBIQUITIN
Authors:Bolton, D, Evans, P.A, Stott, K, Broadhurst, R.W.
Deposit date:2001-08-06
Release date:2001-12-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Properties of a Dimeric N-Terminal Fragment of Human Ubiquitin.
J.Mol.Biol., 314, 2001
2RSU
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BU of 2rsu by Molmil
Alternative structure of Ubiquitin
Descriptor: Ubiquitin
Authors:Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R.
Deposit date:2012-06-15
Release date:2013-03-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin
Biochemistry, 52, 2013
2BGF
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BU of 2bgf by Molmil
NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDCs and 15N-relaxation data
Descriptor: DI-UBIQUITIN
Authors:Van Dijk, A.D.J, Fushman, D, Bonvin, A.M.J.J.
Deposit date:2004-12-22
Release date:2005-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Various Strategies of Using Residual Dipolar Couplings in NMR-Driven Protein Docking: Application to Lys48-Linked Di-Ubiquitin and Validation Against 15N-Relaxation Data
Proteins: Struct., Funct., Bioinf., 60, 2005
6V5D
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BU of 6v5d by Molmil
EROS3 RDC and NOE Derived Ubiquitin Ensemble
Descriptor: Ubiquitin
Authors:Lange, O.F, Lakomek, N.A, Smith, C.A, Griesinger, C, de Groot, B.L.
Deposit date:2019-12-04
Release date:2020-01-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Enhancing NMR derived ensembles with kinetics on multiple timescales.
J.Biomol.Nmr, 74, 2020
2MWS
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BU of 2mws by Molmil
Structure of the complex of ubiquitin and the ubiquitin-like (UBL) domain of Ddi1
Descriptor: DNA damage-inducible protein 1, Ubiquitin
Authors:Fushman, D, Nowicka, U, Walker, O.
Deposit date:2014-11-23
Release date:2015-03-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2JZZ
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BU of 2jzz by Molmil
Solid-State NMR Structure of Microcrystalline Ubiquitin
Descriptor: Ubiquitin
Authors:Manolikas, T, Herrmann, T, Meier, B.H.
Deposit date:2008-01-22
Release date:2008-03-25
Last modified:2024-05-08
Method:SOLID-STATE NMR
Cite:Protein structure determination from 13C spin-diffusion solid-state NMR spectroscopy.
J.Am.Chem.Soc., 130, 2008
1D3Z
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BU of 1d3z by Molmil
UBIQUITIN NMR STRUCTURE
Descriptor: PROTEIN (UBIQUITIN)
Authors:Cornilescu, G, Marquardt, J.L, Ottiger, M, Bax, A.
Deposit date:1999-10-01
Release date:1999-10-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase
J.Am.Chem.Soc., 120, 1998
2RR9
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BU of 2rr9 by Molmil
The solution structure of the K63-Ub2:tUIMs complex
Descriptor: Putative uncharacterized protein UIMC1, ubiquitin
Authors:Sekiyama, N, Jee, J, Isogai, S, Akagi, K, Huang, T, Ariyoshi, M, Tochio, H, Shirakawa, M.
Deposit date:2010-06-16
Release date:2011-07-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The solution structure of the K63-Ub2:tUIMs complex
To be Published
2Z59
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BU of 2z59 by Molmil
Complex Structures of Mouse Rpn13 (22-130aa) and ubiquitin
Descriptor: Protein ADRM1, Ubiquitin
Authors:Chen, X, Schreiner, P, Groll, M, Walters, K.J.
Deposit date:2007-07-01
Release date:2008-05-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction.
Nature, 453, 2008
1YX6
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BU of 1yx6 by Molmil
Solution Structure of S5a UIM-2/Ubiquitin Complex
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
Authors:Wang, Q, Young, P, Walters, K.J.
Deposit date:2005-02-19
Release date:2005-04-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of S5a Bound to Monoubiquitin Provides a Model for Polyubiquitin Recognition
J.Mol.Biol., 348, 2005
1YX5
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BU of 1yx5 by Molmil
Solution Structure of S5a UIM-1/Ubiquitin Complex
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
Authors:Wang, Q, Young, P, Walters, K.J.
Deposit date:2005-02-19
Release date:2005-04-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of S5a Bound to Monoubiquitin Provides a Model for Polyubiquitin Recognition
J.Mol.Biol., 348, 2005
1FXT
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BU of 1fxt by Molmil
STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTER COMPLEX
Descriptor: UBIQUITIN, UBIQUITIN-CONJUGATING ENZYME E2-24 KDA
Authors:Hamilton, K.S, Shaw, G.S, Williams, R.S, Huzil, J.T, McKenna, S, Ptak, C, Glover, M, Ellison, M.J.
Deposit date:2000-09-26
Release date:2001-10-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of a conjugating enzyme-ubiquitin thiolester intermediate reveals a novel role for the ubiquitin tail.
Structure, 9, 2001
1XQQ
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BU of 1xqq by Molmil
Simultaneous determination of protein structure and dynamics
Descriptor: ubiquitin
Authors:Lindorff-Larsen, K, Best, R.B, DePristo, M.A, Vendruscolo, M, Dobson, C.M.
Deposit date:2004-10-13
Release date:2005-02-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Simultaneous determination of protein structure and dynamics
Nature, 433, 2005
2KJH
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BU of 2kjh by Molmil
NMR based structural model of the UBCH8-UBIQUITIN complex
Descriptor: Ubiquitin, Ubiquitin/ISG15-conjugating enzyme E2 L6
Authors:Serniwka, S.A, Shaw, G.S.
Deposit date:2009-05-28
Release date:2009-12-08
Last modified:2021-10-13
Method:SOLUTION NMR
Cite:The structure of the UbcH8-ubiquitin complex shows a unique ubiquitin interaction site.
Biochemistry, 48, 2009
2KDF
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BU of 2kdf by Molmil
NMR structure of minor S5a (196-306):K48 linked diubiquitin species
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
Authors:Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
Deposit date:2009-01-06
Release date:2009-09-01
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2K8B
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BU of 2k8b by Molmil
Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiquitin
Descriptor: Phospholipase A-2-activating protein, Ubiquitin
Authors:Fu, Q.S, Zhou, C.J, Gao, H.C, Lin, D.H, Hu, H.Y.
Deposit date:2008-09-04
Release date:2009-05-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein.
J.Biol.Chem., 284, 2009
1G6J
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BU of 1g6j by Molmil
STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLES
Descriptor: UBIQUITIN
Authors:Babu, C.R, Flynn, P.F, Wand, A.J.
Deposit date:2000-11-06
Release date:2001-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Validation of protein structure from preparations of encapsulated proteins dissolved in low viscosity fluids.
J.Am.Chem.Soc., 123, 2001
2KX0
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BU of 2kx0 by Molmil
the solution structure of UBB+1, frameshift mutant of ubiquitin B
Descriptor: ubiquitin B
Authors:Ko, S.
Deposit date:2010-04-22
Release date:2010-09-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:the solution structure of UBB+1, frameshift mutant of ubiquitin B
To be Published

221716

건을2024-06-26부터공개중

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