PDB: 2906 件ウェブページステータス検索Chemie searchBIRD

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6VGR	Crystal Structure of Human Dipeptidase 3 in Complex with Fab of SC-003 分子名称: Dipeptidase 3, SC-003 Fab Heavy Chain, SC-003 Fab Light Chain 著者 Hayashi, K, Longenecker, K.L, Vivona, S. 登録日 2020-01-08 公開日 2020-05-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Structure of human DPEP3 in complex with the SC-003 antibody Fab fragment reveals basis for lack of dipeptidase activity. J.Struct.Biol., 211, 2020
1I4W	THE CRYSTAL STRUCTURE OF THE TRANSCRIPTION FACTOR SC-MTTFB OFFERS INTRIGUING INSIGHTS INTO MITOCHONDRIAL TRANSCRIPTION 分子名称: MITOCHONDRIAL REPLICATION PROTEIN MTF1, XENON 著者 Schubot, F.D, Chen, C.-J, Rose, J.P, Dailey, T.A, Dailey, H.A, Wang, B.-C. 登録日 2001-02-23 公開日 2001-10-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of the transcription factor sc-mtTFB offers insights into mitochondrial transcription. Protein Sci., 10, 2001
2K66	NMR solution structure of the d3'-stem closed by a GAAA tetraloop of the group II intron Sc.ai5(gamma) 分子名称: 5'-R(*GP*GP*AP*GP*UP*AP*UP*GP*UP*GP*AP*AP*AP*GP*CP*AP*UP*AP*CP*UP*CP*C)-3' 著者 Kruschel, D, Sigel, R.K.O. 登録日 2008-07-04 公開日 2009-07-14 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 NMR structure of the 5' splice site in the group IIB intron Sc.ai5 gamma--conformational requirements for exon-intron recognition. Rna, 20, 2014
1HOV	SOLUTION STRUCTURE OF A CATALYTIC DOMAIN OF MMP-2 COMPLEXED WITH SC-74020 分子名称: CALCIUM ION, MATRIX METALLOPROTEINASE-2, N-{4-[(1-HYDROXYCARBAMOYL-2-METHYL-PROPYL)-(2-MORPHOLIN-4-YL-ETHYL)-SULFAMOYL]-4-PENTYL-BENZAMIDE, ... 著者 Feng, Y, Likos, J.J, Zhu, L, Woodward, H, Munie, G, McDonald, J.J, Stevens, A.M, Howard, C.P, De Crescenzo, G.A, Welsch, D, Shieh, H.-S, Stallings, W.C. 登録日 2000-12-11 公開日 2001-12-12 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and backbone dynamics of the catalytic domain of matrix metalloproteinase-2 complexed with a hydroxamic acid inhibitor Biochim.Biophys.Acta, 1598, 2002
6VGO	Crystal Structure of Human Dipeptidase 3 分子名称: Dipeptidase 3 著者 Hayashi, K, Longenecker, K.L, Vivona, S. 登録日 2020-01-08 公開日 2020-05-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Structure of human DPEP3 in complex with the SC-003 antibody Fab fragment reveals basis for lack of dipeptidase activity. J.Struct.Biol., 211, 2020
2M24	NMR solution structure of the d3'-hairpin including the exon binding site 1 (EBS1) of the group II intron Sc.ai5gamma 分子名称: RNA (29-MER) 著者 Kruschel, D, Skilandat, M, Sigel, R.K.O. 登録日 2012-12-12 公開日 2013-12-18 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 NMR structure of the 5' splice site in the group IIB intron Sc.ai5 gamma--conformational requirements for exon-intron recognition. Rna, 20, 2014
2M23	NMR solution structure of the d3'-hairpin of the group II intron Sc.ai5gamma including EBS1 bound to IBS1 分子名称: RNA (29-MER), RNA_(5'-R(*CP*AP*GP*UP*GP*UP*C)-3')_ 著者 Kruschel, D, Skilandat, M, Sigel, R.K.O. 登録日 2012-12-12 公開日 2013-12-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR structure of the 5' splice site in the group IIB intron Sc.ai5 gamma--conformational requirements for exon-intron recognition. Rna, 20, 2014
6LP1	Crystal structure of acetate:succinate CoA transferase (ASCT) from Trypanosoma brucei. 分子名称: CALCIUM ION, GLYCEROL, Succinyl-CoA:3-ketoacid-coenzyme A transferase 著者 Mochizuki, K, Inaoka, D.K, Shiba, T, Fukuda, K, Kurasawa, H, Mazet, M, Millerioux, Y, Bringaud, F, Boshart, M, Balogun, E.O, Harada, S, Hirayama, K, Kita, K. 登録日 2020-01-08 公開日 2020-10-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 The ASCT/SCS cycle fuels mitochondrial ATP and acetate production in Trypanosoma brucei. Biochim Biophys Acta Bioenerg, 1861, 2020
8A3K	X-ray crystal structure of a de novo designed single-chain antiparallel 4-helix coiled-coil bundle, sc-apCC-4 分子名称: sc-apCC-4 著者 Albanese, K.I, Mylemans, B, Naudin, E.A, Woolfson, D.N. 登録日 2022-06-08 公開日 2022-10-05 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles. Chem Sci, 13, 2022
8QAF	X-ray crystal structure of a de novo designed single-chain antiparallel 8-helix coiled-coil alpha-helical barrel, sc-apCC-8 分子名称: sc-apCC-8 著者 Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAH	X-ray crystal structure of a de novo designed single-chain parallel coiled-coil alpha-helical barrel with 8 inner helices, sc-CC-8-58 分子名称: sc-CC-8-58 著者 Petrenas, R, Albanese, K.I, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
6COX	CYCLOOXYGENASE-2 (PROSTAGLANDIN SYNTHASE-2) COMPLEXED WITH A SELECTIVE INHIBITOR, SC-558 IN I222 SPACE GROUP 分子名称: 1-PHENYLSULFONAMIDE-3-TRIFLUOROMETHYL-5-PARABROMOPHENYLPYRAZOLE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CYCLOOXYGENASE-2, ... 著者 Kurumbail, R, Stallings, W. 登録日 1996-12-18 公開日 1997-12-24 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for selective inhibition of cyclooxygenase-2 by anti-inflammatory agents. Nature, 384, 1996
6XKZ	R. capsulatus CIII2CIV tripartite super-complex, conformation B (SC-1B) 分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ... 著者 Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F. 登録日 2020-06-27 公開日 2020-12-30 最終更新日 2021-03-03 実験手法 ELECTRON MICROSCOPY (7.2 Å) 主引用文献 Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes. Nat Commun, 12, 2021
6XKX	R. capsulatus CIII2CIV tripartite super-complex, conformation A (SC-1A) 分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ... 著者 Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F. 登録日 2020-06-27 公開日 2020-12-30 最終更新日 2021-03-03 実験手法 ELECTRON MICROSCOPY (6.1 Å) 主引用文献 Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes. Nat Commun, 12, 2021
6XKW	R. capsulatus CIII2CIV bipartite super-complex (SC-2A) with CcoH/cy 分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP, Cytochrome b, ... 著者 Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F. 登録日 2020-06-27 公開日 2020-12-30 最終更新日 2021-03-03 実験手法 ELECTRON MICROSCOPY (5.2 Å) 主引用文献 Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes. Nat Commun, 12, 2021
6Q9B	CI Membrane Arm focused refinement from Ovine respiratory SC I+III2 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Acyl carrier protein, ... 著者 Letts, J.A, Sazanov, L.A. 登録日 2018-12-17 公開日 2019-08-21 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk. Mol.Cell, 75, 2019
6Q9D	CI Peripheral Arm focused refinement from Ovine respiratory SC I+III2 分子名称: Acyl carrier protein, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Letts, J.A, Sazanov, L.A. 登録日 2018-12-18 公開日 2019-08-21 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk. Mol.Cell, 75, 2019
1R50	Bacillus subtilis lipase A with covalently bound Sc-IPG-phosphonate-inhibitor 分子名称: Lipase, [(4S)-2,2-DIMETHYL-1,3-DIOXOLAN-4-YL]METHYL HYDROGEN HEX-5-ENYLPHOSPHONATE 著者 Droege, M.J, Van Pouderoyen, G, Vrenken, T.E, Rueggeberg, C.J, Reetz, M.T, Dijkstra, B.W, Quax, W.J. 登録日 2003-10-09 公開日 2004-10-19 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Directed Evolution of Bacillus subtilis Lipase A by Use of Enantiomeric Phosphonate Inhibitors: Crystal Structures and Phage Display Selection Chembiochem, 7, 2005
1CX2	CYCLOOXYGENASE-2 (PROSTAGLANDIN SYNTHASE-2) COMPLEXED WITH A SELECTIVE INHIBITOR, SC-558 分子名称: 1-PHENYLSULFONAMIDE-3-TRIFLUOROMETHYL-5-PARABROMOPHENYLPYRAZOLE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CYCLOOXYGENASE-2, ... 著者 Kurumbail, R, Stallings, W. 登録日 1996-12-17 公開日 1997-12-24 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for selective inhibition of cyclooxygenase-2 by anti-inflammatory agents. Nature, 384, 1996
3KRY	Crystal structure of MMP-13 in complex with SC-78080 分子名称: 1-(2-methoxyethyl)-N-oxo-4-({4-[4-(trifluoromethoxy)phenoxy]phenyl}sulfonyl)piperidine-4-carboxamide, CALCIUM ION, Collagenase 3, ... 著者 Kiefer, J.R, Williams, J.M, Becker, D.P. 登録日 2009-11-19 公開日 2010-10-06 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Orally-active MMP-1 sparing alpha-tetrahydropyranyl and alpha-piperidinyl sulfone matrix metalloproteinase (MMP) inhibitors with efficacy in cancer, arthritis, and cardiovascular disease J.Med.Chem., 53, 2010
7JRP	Plant Mitochondrial complex SC III2+IV from Vigna radiata 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Alpha-MPP, ... 著者 Maldonado, M, Letts, J.A. 登録日 2020-08-12 公開日 2021-01-20 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Atomic structures of respiratory complex III 2 , complex IV, and supercomplex III 2 -IV from vascular plants. Elife, 10, 2021
8QAI	X-ray crystal structure of a de novo designed single-chain parallel coiled-coil alpha-helical barrel with 7 inner helices, sc-CC-7-LI 分子名称: DI(HYDROXYETHYL)ETHER, sc-CC-7-LI 著者 Petrenas, R, Albanese, K.I, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAD	X-ray crystal structure of a de novo designed single-chain antiparallel 6-helix coiled-coil alpha-helical barrel, sc-apCC-6-LLIA 分子名称: DODECAETHYLENE GLYCOL, sc-apCC-6-LLIA 著者 Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QKD	X-ray crystal structure of a de novo designed single-chain parallel coiled-coil alpha-helical barrel with 5 inner helices, sc-CC-5-24 分子名称: DI(HYDROXYETHYL)ETHER, sc-CC-5-24 著者 Petrenas, R, Albanese, K.I, Woolfson, D.N. 登録日 2023-09-15 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAE	X-ray crystal structure of a de novo designed single-chain antiparallel 6-helix alpha-helical barrel, sc-apCC-6-SLLA 分子名称: 2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-(2-hydroxyethyloxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol, PENTAETHYLENE GLYCOL, sc-apCC-6-SLLA 著者 Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024

 

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