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2IC8
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Crystal structure of GlpG
分子名称: Protein glpG, nonyl beta-D-glucopyranoside
著者Ha, Y.
登録日2006-09-12
公開日2006-10-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a rhomboid family intramembrane protease.
Nature, 444, 2006
2IRV
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Crystal structure of GlpG, a rhomboid intramembrane serine protease
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, DODECYL-BETA-D-MALTOSIDE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者Bibi, E, Fass, D, Ben-Shem, A.
登録日2006-10-16
公開日2006-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for intramembrane proteolysis by rhomboid serine proteases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2NR9
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Crystal structure of GlpG, Rhomboid Peptidase from Haemophilus influenzae
分子名称: (R)-2-(FORMYLOXY)-3-(PHOSPHONOOXY)PROPYL PENTANOATE, 3,6,12,15,18,21,24-HEPTAOXAHEXATRIACONTAN-1-OL, Protein glpG homolog
著者Lemieux, M.J, Fischer, S.J, Cherney, M.M, Bateman, K.S, James, M.N.G.
登録日2006-11-01
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of the rhomboid peptidase from Haemophilus influenzae provides insight into intramembrane proteolysis.
Proc.Natl.Acad.Sci.USA, 104, 2007
2NRF
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Crystal Structure of GlpG, a Rhomboid family intramembrane protease
分子名称: Protein GlpG
著者Wu, Z, Yan, N, Feng, L, Yan, H, Gu, L, Shi, Y.
登録日2006-11-02
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry.
Nat.Struct.Mol.Biol., 13, 2006
2O7L
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The open-cap conformation of GlpG
分子名称: Protein glpG, nonyl beta-D-glucopyranoside
著者Ha, Y.
登録日2006-12-11
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Open-cap conformation of intramembrane protease GlpG.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B45
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Crystal structure of GlpG at 1.9A resolution
分子名称: glpG, nonyl beta-D-glucopyranoside
著者Wang, Y, Maegawa, S, Akiyama, Y, Ha, Y.
登録日2007-10-23
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG.
J.Mol.Biol., 374, 2007
3B44
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Crystal structure of GlpG W136A mutant
分子名称: glpG, nonyl beta-D-glucopyranoside
著者Wang, Y, Maegawa, S, Akiyama, Y, Ha, Y.
登録日2007-10-23
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG.
J.Mol.Biol., 374, 2007
3ODJ
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Crystal structure of H. influenzae rhomboid GlpG with disordered loop 4, helix 5 and loop 5
分子名称: Rhomboid protease glpG
著者Brooks, C.L, Lazareno-Saez, C, Lamoureux, J.S, Mak, M.W, Lemieux, M.J.
登録日2010-08-11
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Insights into Substrate Gating in H. influenzae Rhomboid.
J.Mol.Biol., 407, 2011
2XOW
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Structure of GlpG in complex with a mechanism-based isocoumarin inhibitor
分子名称: 5-AMINO-2-(2-METHOXY-2-OXOETHYL)BENZOIC ACID, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
登録日2010-08-24
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献The Structural Basis for Catalysis and Substrate Specificity of a Rhomboid Protease
Embo J., 29, 2010
2XOV
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Crystal Structure of E.coli rhomboid protease GlpG, native enzyme
分子名称: GLYCEROL, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
登録日2010-08-24
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The structural basis for catalysis and substrate specificity of a rhomboid protease.
EMBO J., 29, 2010
2XTU
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Structure of E.coli rhomboid protease GlpG active site mutant, S201T in trigonal crystal form
分子名称: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of Rhomboid Protease in a Lipid Environment
J.Mol.Biol., 407, 2011
2XTV
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Structure of E.coli rhomboid protease GlpG, active site mutant, S201T, orthorhombic crystal form
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, RHOMBOID PROTEASE GLPG
著者Vinothkumar, K.R.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of rhomboid protease in a lipid environment.
J. Mol. Biol., 407, 2011
3TXT
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Crystal structure of GlpG in complex with inhibitor DFP
分子名称: DIISOPROPYL PHOSPHONATE, Rhomboid protease glpG
著者Xue, Y, Ha, Y.
登録日2011-09-23
公開日2011-12-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of rhomboid protease GlpG in complex with a mechanism-based inhibitor
To be Published
3UBB
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The crystal structure of GlpG in complex with a phosphonofluoridate inhibitor
分子名称: Rhomboid protease glpG, propan-2-yl hydrogen (S)-[(1R)-1-{[(benzyloxy)carbonyl]amino}ethyl]phosphonate
著者Xue, Y, Ha, Y.
登録日2011-10-24
公開日2012-06-13
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Conformational Change in Rhomboid Protease GlpG Induced by Inhibitor Binding to Its S' Subsites.
Biochemistry, 51, 2012
4H1D
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Cocrystal structure of GlpG and DFP
分子名称: DIISOPROPYL PHOSPHONATE, Rhomboid protease GlpG
著者Xue, Y, Ha, Y.
登録日2012-09-10
公開日2013-05-01
最終更新日2013-06-26
実験手法X-RAY DIFFRACTION (2.8975 Å)
主引用文献Large lateral movement of transmembrane helix s5 is not required for substrate access to the active site of rhomboid intramembrane protease.
J.Biol.Chem., 288, 2013
3ZEB
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A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150
分子名称: 2-phenylethyl 2-(4-azanyl-2-methanoyl-phenyl)ethanoate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, voskya, O, Kuettler, E.V, Brouwer, A.J, Liskamp, R.M.J, Verhelst, S.H.L.
登録日2012-12-04
公開日2013-02-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Activity-Based Probes for Rhomboid Proteases Discovered in a Mass Spectrometry-Based Assay.
Proc.Natl.Acad.Sci.USA, 110, 2013
3ZMJ
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Structure of E.coli rhomboid protease GlpG in complex with monobactam L61
分子名称: 2-methylpropyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, Pierrat, O, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
3ZMI
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Structure of E.coli rhomboid protease GlpG in complex with monobactam L29
分子名称: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside, phenyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
3ZMH
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Structure of E.coli rhomboid protease GlpG in complex with monobactam L62
分子名称: CHLORIDE ION, CYCLOPENTYL 2-OXO-4-PHENYLAZETIDINE-1-CARBOXYLATE, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of rhomboid protease in complex with beta-lactam inhibitors defines the S2' cavity.
Structure, 21, 2013
3ZOT
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Structure of E.coli rhomboid protease GlpG in complex with monobactam L29 (data set 2)
分子名称: CHLORIDE ION, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside, ...
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-24
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
4NJN
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Crystal Structure of E.coli GlpG at pH 4.5
分子名称: Rhomboid protease GlpG
著者Dickey, S.W, Baker, R.P, Cho, S, Urban, S.
登録日2013-11-11
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Proteolysis inside the Membrane Is a Rate-Governed Reaction Not Driven by Substrate Affinity.
Cell(Cambridge,Mass.), 155, 2013
4NJP
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Proteolysis inside the membrane is a rate-governed reaction not Driven by substrate affinity
分子名称: Rhomboid protease GlpG
著者Dickey, S.W, Baker, R.P, Cho, S, Urban, S.
登録日2013-11-11
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Proteolysis inside the Membrane Is a Rate-Governed Reaction Not Driven by Substrate Affinity.
Cell(Cambridge,Mass.), 155, 2013
5F5K
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E.Coli GlpG Y205F mutant complexed with aldehyde inhibitor in DMPC/CHAPSO bicelle
分子名称: Peptidic derivative of Gurken: ACE-ARG-LYS-VAL-ARG-MET-ALA-aldehyde, Rhomboid protease GlpG
著者Urban, S, Cho, S, Dickey, S.W.
登録日2015-12-04
公開日2016-02-10
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis.
Mol.Cell, 61, 2016
5F5J
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E.coli GlpG Y205F mutant complexed with aldehyde inhibitor in DMPC/CHAPSO bicelle
分子名称: Rhomboid protease GlpG, peptidic derivative of Gurken: ACE-VAL-ARG-MET-ALA-aldehyde
著者Urban, S, Cho, S, Dickey, S.
登録日2015-12-04
公開日2016-02-10
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis.
Mol.Cell, 61, 2016
5F5B
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Structure of E.Coli GlpG complexed with peptidic inhibitor Ac-VRMA-CHO
分子名称: Rhomboid protease GlpG, peptidic derivative of Gurken: ACE-VAL-ARG-MET-ALA-aldehyde
著者Urban, S, Cho, S, Dickey, S.W.
登録日2015-12-04
公開日2016-02-17
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis.
Mol.Cell, 61, 2016

 

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